Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0546261 Helianthus annuus HOM05D005818 ORTHO05D007275 1.0e-84 316.6 148 100.0
HanXRQChr11g0353211 Helianthus annuus HOM05D005818 ORTHO05D007275 3.6e-82 308.1 147 97.3
ECA248G0788 Erigeron canadensis HOM05D005818 ORTHO05D007275 9.4e-75 283.5 147 87.8
HanXRQChr03g0075511 Helianthus annuus HOM05D005818 ORTHO05D007275 1.9e-67 259.2 147 79.6
ECA246G3685 Erigeron canadensis HOM05D005818 ORTHO05D007275 6.1e-66 254.2 147 78.2
PGR102G1892 Punica granatum HOM05D005818 ORTHO05D007275 6.1e-66 254.2 147 78.2
Lsat_1_v5_gn_6_114661 Lactuca sativa HOM05D005818 ORTHO05D007275 1.0e-65 253.4 147 76.9
Lsat_1_v5_gn_1_42580 Lactuca sativa HOM05D005818 ORTHO05D007275 5.2e-65 251.1 146 76.0
Glyma.05G171900 Glycine max HOM05D005818 ORTHO05D007275 5.7e-64 247.7 147 74.1
Glyma.05G172000 Glycine max HOM05D005818 ORTHO05D007275 5.7e-64 247.7 147 74.1
Lj8P735T44 Lonicera japonica HOM05D005818 ORTHO05D007275 7.4e-64 247.3 147 74.8
Eucgr.K01051 Eucalyptus grandis HOM05D005818 ORTHO05D007275 9.7e-64 246.9 147 75.5
DCAR_022848 Daucus carota HOM05D005818 ORTHO05D007275 1.3e-63 246.5 147 73.5
Sc09g0010490 Simmondsia chinensis HOM05D005818 ORTHO05D007275 2.2e-63 245.7 147 75.5
TAR636G1709 Trochodendron aralioides HOM05D005818 ORTHO05D007275 2.2e-63 245.7 147 75.5
Aqoxy7G03461 Aquilegia oxysepala HOM05D005818 ORTHO05D007275 4.8e-63 244.6 147 74.1
Cfa013078 Carpinus fangiana HOM05D005818 ORTHO05D007275 6.3e-63 244.2 147 74.1
Lj7P732T20 Lonicera japonica HOM05D005818 ORTHO05D007275 6.3e-63 244.2 147 72.8
Phvul.002G258100 Phaseolus vulgaris HOM05D005818 ORTHO05D007275 6.3e-63 244.2 146 72.6
Rhsim07G0163300 Rhododendron simsii HOM05D005818 ORTHO05D007275 8.2e-63 243.8 147 73.5
VMungo0251G1060 Vigna mungo HOM05D005818 ORTHO05D007275 1.1e-62 243.4 147 73.5
Aa31LG3G10750 Aethionema arabicum HOM05D005818 ORTHO05D007275 1.8e-62 242.7 147 73.5
Lj4g0020516 Lotus japonicus HOM05D005818 ORTHO05D007275 1.8e-62 242.7 147 72.8
EL10Ac2g04133 Beta vulgaris HOM05D005818 ORTHO05D007275 3.1e-62 241.9 148 73.6
AUR62031588 Chenopodium quinoa HOM05D005818 ORTHO05D007275 3.1e-62 241.9 148 73.6
Dinv16468 Davidia involucrata HOM05D005818 ORTHO05D007275 4.1e-62 241.5 147 73.5
Ah.10g035560 Amaranthus hybridus HOM05D005818 ORTHO05D007275 5.3e-62 241.1 148 73.6
MELO3C016969.2 Cucumis melo HOM05D005818 ORTHO05D007275 5.3e-62 241.1 147 72.8
VMungo0251G0717 Vigna mungo HOM05D005818 ORTHO05D007275 7.0e-62 240.7 147 71.4
arahy.Tifrunner.gnm1.ann1.YJK833 Arachis hypogaea HOM05D005818 ORTHO05D007275 1.2e-61 240.0 147 72.1
Migut.E01825 Erythranthe guttata HOM05D005818 ORTHO05D007275 1.2e-61 240.0 147 74.1
Phvul.002G258000 Phaseolus vulgaris HOM05D005818 ORTHO05D007275 1.2e-61 240.0 147 71.4
CAN.G199.64 Capsicum annuum HOM05D005818 ORTHO05D007275 1.6e-61 239.6 147 74.1
Cc11_g13200 Coffea canephora HOM05D005818 ORTHO05D007275 1.6e-61 239.6 148 74.3
Lalb_Chr20g0117741 Lupinus albus HOM05D005818 ORTHO05D007275 1.6e-61 239.6 147 71.4
A02p10010 Brassica napus HOM05D005818 ORTHO05D007275 2.0e-61 239.2 147 72.8
C02p16620 Brassica napus HOM05D005818 ORTHO05D007275 2.0e-61 239.2 147 72.8
BolC2t07763H Brassica oleracea HOM05D005818 ORTHO05D007275 2.0e-61 239.2 147 72.8
BraA02t06067Z Brassica rapa HOM05D005818 ORTHO05D007275 2.0e-61 239.2 147 72.8
CSS0013828 Camellia sinensis var. sinensis HOM05D005818 ORTHO05D007275 2.0e-61 239.2 147 72.1
CSS0042479 Camellia sinensis var. sinensis HOM05D005818 ORTHO05D007275 2.0e-61 239.2 147 72.1
BcaC03g14283 Brassica carinata HOM05D005818 ORTHO05D007275 2.6e-61 238.8 147 72.1
Lalb_Chr18g0055231 Lupinus albus HOM05D005818 ORTHO05D007275 2.6e-61 238.8 147 70.7
ClCG05G016380 Citrullus lanatus HOM05D005818 ORTHO05D007275 3.5e-61 238.4 147 71.4
PSO063G4008 Papaver somniferum HOM05D005818 ORTHO05D007275 3.5e-61 238.4 147 72.1
PSO561G0062 Papaver somniferum HOM05D005818 ORTHO05D007275 3.5e-61 238.4 147 72.1
AL8G30270 Arabidopsis lyrata HOM05D005818 ORTHO05D007275 4.5e-61 238.0 147 72.1
CANSAT64G1059 Cannabis sativa HOM05D005818 ORTHO05D007275 4.5e-61 238.0 147 72.8
Carub.0008s1512 Capsella rubella HOM05D005818 ORTHO05D007275 4.5e-61 238.0 147 72.1
CsaV3_4G036660 Cucumis sativus L. HOM05D005818 ORTHO05D007275 4.5e-61 238.0 147 72.1
THA.LOC104825447 Tarenaya hassleriana HOM05D005818 ORTHO05D007275 4.5e-61 238.0 147 72.1
AT5G54830 Arabidopsis thaliana HOM05D005818 ORTHO05D007275 5.9e-61 237.7 147 71.4
Sed0001657 Sechium edule HOM05D005818 ORTHO05D007275 5.9e-61 237.7 147 71.4
TWI63G0086 Tripterygium wilfordii HOM05D005818 ORTHO05D007275 5.9e-61 237.7 147 72.8
Sp6g16790 Schrenkiella parvula HOM05D005818 ORTHO05D007275 7.7e-61 237.3 147 72.8
Solyc06g065720.1 Solanum lycopersicum HOM05D005818 ORTHO05D007275 7.7e-61 237.3 147 73.5
THA.LOC104814997 Tarenaya hassleriana HOM05D005818 ORTHO05D007275 7.7e-61 237.3 147 72.8
Potri.018G021000 Populus trichocarpa HOM05D005818 ORTHO05D007275 1.0e-60 236.9 146 72.6
PGSC0003DMG400026093 Solanum tuberosum HOM05D005818 ORTHO05D007275 1.3e-60 236.5 147 72.8
BcaB05g22162 Brassica carinata HOM05D005818 ORTHO05D007275 1.7e-60 236.1 147 72.1
Thhalv10012618m.g Eutrema salsugineum HOM05D005818 ORTHO05D007275 1.7e-60 236.1 148 73.0
Potri.006G262300 Populus trichocarpa HOM05D005818 ORTHO05D007275 1.7e-60 236.1 146 73.3
Ca_00522_v3 Cicer arietinum L. HOM05D005818 ORTHO05D007275 2.2e-60 235.7 147 71.4
Medtr2g018960 Medicago truncatula HOM05D005818 ORTHO05D007275 2.2e-60 235.7 147 70.7
RcHm_v2.0_Chr6g0299641 Rosa chinensis HOM05D005818 ORTHO05D007275 2.2e-60 235.7 147 72.8
Sopen06g024250 Solanum pennellii HOM05D005818 ORTHO05D007275 2.2e-60 235.7 147 72.8
arahy.Tifrunner.gnm1.ann1.VP29DX Arachis hypogaea HOM05D005818 ORTHO05D007275 2.9e-60 235.3 148 71.6
Haze_21435 Corylus avellana HOM05D005818 ORTHO05D007275 2.9e-60 235.3 147 72.1
CARHR268160 Cardamine hirsuta HOM05D005818 ORTHO05D007275 3.8e-60 235.0 147 71.4
Gohir.D11G305200 Gossypium hirsutum HOM05D005818 ORTHO05D007275 3.8e-60 235.0 147 71.4
Sabra18G0023300 Salix brachista HOM05D005818 ORTHO05D007275 3.8e-60 235.0 146 72.6
Nn8g39810 Nelumbo nucifera HOM05D005818 ORTHO05D007275 5.0e-60 234.6 147 71.4
TWI32G0212 Tripterygium wilfordii HOM05D005818 ORTHO05D007275 5.0e-60 234.6 147 72.1
CiPaw.07G228600 Carya illinoinensis HOM05D005818 ORTHO05D007275 6.5e-60 234.2 149 71.1
Os09g0557700 Oryza sativa ssp. japonica HOM05D005818 ORTHO05D007275 6.5e-60 234.2 147 71.4
Gorai.007G327200 Gossypium raimondii HOM05D005818 ORTHO05D007275 8.5e-60 233.8 147 70.7
Lj6g0009984 Lotus japonicus HOM05D005818 ORTHO05D007275 8.5e-60 233.8 146 70.5
Sabra06G0204600 Salix brachista HOM05D005818 ORTHO05D007275 8.5e-60 233.8 146 72.6
MD08G1058600 Malus domestica HOM05D005818 ORTHO05D007275 1.1e-59 233.4 146 71.2
SGA_v2.0_scaffold64G21910 Striga asiatica HOM05D005818 ORTHO05D007275 1.1e-59 233.4 148 71.6
Psat1g191920 Pisum sativum HOM05D005818 ORTHO05D007275 1.5e-59 233.0 147 70.7
Zm00001eb320520 Zea mays HOM05D005818 ORTHO05D007275 1.5e-59 233.0 149 72.5
Gohir.D05G340100 Gossypium hirsutum HOM05D005818 ORTHO05D007275 1.9e-59 232.6 148 70.3
Gorai.009G366500 Gossypium raimondii HOM05D005818 ORTHO05D007275 1.9e-59 232.6 148 70.3
Sed0004841 Sechium edule HOM05D005818 ORTHO05D007275 1.9e-59 232.6 147 70.7
Thecc.07G127100 Theobroma cacao HOM05D005818 ORTHO05D007275 1.9e-59 232.6 147 71.4
Gohir.A04G043500 Gossypium hirsutum HOM05D005818 ORTHO05D007275 2.5e-59 232.3 148 70.3
Peaxi162Scf00013g00006 Petunia axillaris HOM05D005818 ORTHO05D007275 2.5e-59 232.3 149 71.8
Ciclev10007396m.g Citrus clementina HOM05D005818 ORTHO05D007275 4.2e-59 231.5 151 69.5
FAN27G3384 Fragaria x ananassa HOM05D005818 ORTHO05D007275 4.2e-59 231.5 147 71.4
Nn2g12310 Nelumbo nucifera HOM05D005818 ORTHO05D007275 4.2e-59 231.5 147 69.4
Duzib213G0959 Durio zibethinus HOM05D005818 ORTHO05D007275 5.5e-59 231.1 147 69.4
FAN15G1998 Fragaria x ananassa HOM05D005818 ORTHO05D007275 5.5e-59 231.1 147 71.4
Peaxi162Scf00430g00054 Petunia axillaris HOM05D005818 ORTHO05D007275 7.2e-59 230.7 149 71.1
CSS0019794 Camellia sinensis var. sinensis HOM05D005818 ORTHO05D007275 9.4e-59 230.3 147 69.4
COL.COLO4_17508 Corchorus olitorius HOM05D005818 ORTHO05D007275 9.4e-59 230.3 147 70.1
Oeu056767.1 Olea europaea HOM05D005818 ORTHO05D007275 9.4e-59 230.3 147 70.1
QL02p019654 Quercus lobata HOM05D005818 ORTHO05D007275 9.4e-59 230.3 149 71.1
FvH4_2g40920 Fragaria vesca HOM05D005818 ORTHO05D003467 1.2e-58 229.9 147 70.7
Lalb_Chr12g0204181 Lupinus albus HOM05D005818 ORTHO05D007275 1.6e-58 229.6 147 68.7
MD15G1037900 Malus domestica HOM05D005818 ORTHO05D007275 3.6e-58 228.4 147 69.4
unitig_750.g28488 Utricularia gibba HOM05D005818 ORTHO05D007275 8.0e-58 227.3 147 70.1
ATR0739G145 Amborella trichopoda HOM05D005818 ORTHO05D007275 1.0e-57 226.9 147 70.1
Prupe.1G391800 Prunus persica HOM05D005818 ORTHO05D007275 1.8e-57 226.1 147 68.7
Manes.16G127800 Manihot esculenta HOM05D005818 ORTHO05D007275 2.3e-57 225.7 147 70.7
Os06g0649700 Oryza sativa ssp. japonica HOM05D005818 ORTHO05D007275 1.5e-56 223.0 147 66.7
SEGI_41314 Sequoiadendron giganteum HOM05D005818 ORTHO05D007275 1.5e-56 223.0 147 67.3
MBI14_g05266_MAGBIO Magnolia biondii HOM05D005818 ORTHO05D007275 3.3e-56 221.9 149 70.5
Gorai.007G327500 Gossypium raimondii HOM05D005818 ORTHO05D007275 3.1e-54 215.3 144 67.4
Atru.chr7.2526 Acer truncatum HOM05D005818 ORTHO05D007275 5.3e-54 214.5 134 73.9
CDE02G0706 Ceratophyllum demersum HOM05D005818 ORTHO05D007275 1.2e-53 213.4 147 66.7
Gohir.D11G305100 Gossypium hirsutum HOM05D005818 ORTHO05D007275 1.2e-50 203.4 147 64.6
Gohir.D11G305115 Gossypium hirsutum HOM05D005818 ORTHO05D007275 1.2e-50 203.4 147 64.6
Gorai.007G328400 Gossypium raimondii HOM05D005818 ORTHO05D007275 1.4e-49 199.9 147 64.6
SMO115G0014 Selaginella moellendorffii HOM05D005818 ORTHO05D007275 2.6e-48 195.7 148 60.1
Gohir.D11G305215 Gossypium hirsutum HOM05D005818 ORTHO05D007275 5.7e-48 194.5 147 62.6
AagrBONN_evm.TU.Sc2ySwM_228.4821 Anthoceros agrestis HOM05D005818 ORTHO05D007275 3.7e-47 191.8 147 61.2
Dinv40997 Davidia involucrata HOM05D005818 ORTHO05D007275 1.2e-45 186.8 147 59.9
Mapoly0076s0010 Marchantia polymorpha HOM05D005818 ORTHO05D007275 2.0e-45 186.0 145 54.5
Pp3c12_1810 Physcomitrium patens HOM05D005818 ORTHO05D007275 1.9e-43 179.5 146 54.1
Gohir.D11G305112 Gossypium hirsutum HOM05D005818 ORTHO05D007275 5.5e-43 177.9 132 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2385 Anthoceros agrestis HOM05D005818 ORTHO05D007275 8.0e-42 174.1 147 57.1
Gohir.A11G287700 Gossypium hirsutum HOM05D005818 ORTHO05D007275 4.3e-35 151.8 147 52.4
Cpa.g.sc127.16 Carica papaya HOM05D005818 ORTHO05D007275 1.4e-30 136.7 95 68.4
CBR_g48221 Chara braunii HOM05D005818 ORTHO05D007275 2.1e-26 122.9 146 39.0
Zm00001eb275050 Zea mays HOM05D005818 ORTHO05D007275 1.9e-06 56.6 26 92.3


User provided reference genes

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