Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 2.8e-154 548.5 266 100.0
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 1.7e-106 389.8 266 71.4
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 2.0e-96 356.3 251 65.3
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 5.6e-94 348.2 255 67.5
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 1.1e-73 280.8 251 56.6
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 1.3e-66 257.3 256 52.0
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 5.1e-63 245.4 250 48.8
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 2.5e-62 243.0 257 49.8
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 1.6e-61 240.4 245 51.4
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.4e-60 237.3 267 46.1
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 2.4e-60 236.5 254 49.6
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 9.9e-59 231.1 264 46.6
SalBow1G4167 Salvia bowleyana HOM05D007529 ORTHO05D007451 9.9e-59 231.1 249 48.2
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 1.7e-58 230.3 264 46.6
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 2.2e-58 229.9 254 47.6
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 5.4e-57 225.3 259 46.3
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 9.3e-57 224.6 253 47.0
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 1.3e-55 220.7 255 47.5
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 5.1e-55 218.8 256 46.1
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 6.7e-55 218.4 251 50.2
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 1.5e-54 217.2 246 48.0
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 7.4e-54 214.9 260 44.2
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 9.6e-54 214.5 248 47.2
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 1.6e-53 213.8 249 45.4
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 6.2e-53 211.8 260 44.2
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.1e-52 211.1 249 45.0
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 1.4e-52 210.7 276 42.0
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.8e-52 210.3 249 44.6
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 3.1e-52 209.5 253 46.6
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 9.0e-52 208.0 239 45.2
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 9.0e-52 208.0 258 45.0
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 3.4e-51 206.1 265 43.8
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 4.5e-51 205.7 253 44.3
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 7.6e-51 204.9 234 47.4
DCAR_013619 Daucus carota HOM05D007529 ORTHO05D007451 7.6e-51 204.9 262 44.7
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.9e-50 203.0 265 43.4
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 2.9e-50 203.0 250 42.8
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 3.8e-50 202.6 266 39.5
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 6.4e-50 201.8 258 43.8
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 8.4e-50 201.4 241 45.2
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 8.4e-50 201.4 265 40.4
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 1.1e-49 201.1 262 42.4
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 1.9e-49 200.3 248 45.6
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 3.2e-49 199.5 258 45.3
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 4.2e-49 199.1 276 39.5
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 2.7e-48 196.4 246 44.3
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 4.6e-48 195.7 262 42.4
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 1.3e-47 194.1 247 43.7
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 1.8e-47 193.7 224 46.4
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 3.9e-47 192.6 256 43.4
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 3.9e-47 192.6 256 44.9
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 8.7e-47 191.4 210 46.2
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.5e-46 190.7 242 42.1
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 5.6e-46 188.7 263 43.0
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 1.1e-44 184.5 261 39.8
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 1.1e-44 184.5 243 42.0
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 6.9e-44 181.8 251 41.4
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 1.2e-43 181.0 262 37.8
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.6e-43 179.9 222 44.1
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 5.8e-43 178.7 253 41.9
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 1.3e-42 177.6 251 43.0
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.7e-42 177.2 233 42.5
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 1.1e-41 174.5 275 38.5
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 9.3e-41 171.4 250 40.8
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 7.9e-40 168.3 195 44.6
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 3.9e-39 166.0 268 39.6
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 2.0e-35 153.7 207 40.6
Haze_19770 Corylus avellana HOM05D007529 ORTHO05D007451 2.6e-35 153.3 190 46.8
Nitab4.5_0000826g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 2.2e-34 150.2 164 48.8
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 8.5e-34 148.3 253 39.1
Aqoxy7G01198 Aquilegia oxysepala HOM05D007529 ORTHO05D007451 1.9e-33 147.1 219 39.7
Nn1g04791 Nelumbo nucifera HOM05D007529 ORTHO05D007451 1.0e-31 141.4 252 36.5
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 1.4e-31 141.0 201 40.8
Sabra04G0050900 Salix brachista HOM05D007529 ORTHO05D007451 1.4e-28 131.0 228 33.8
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 1.2e-27 127.9 260 34.6
CiPaw.09G042800 Carya illinoinensis HOM05D007529 ORTHO05D007451 2.0e-27 127.1 261 34.5
FvH4_2g38461 Fragaria vesca HOM05D007529 ORTHO05D007451 2.6e-27 126.7 188 39.9
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 5.9e-27 125.6 255 34.5
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 1.4e-23 114.4 250 32.0
CDE11G0566 Ceratophyllum demersum HOM05D007529 ORTHO05D007451 1.8e-23 114.0 167 35.3
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 2.0e-22 110.5 250 33.6
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 4.4e-22 109.4 250 33.6
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 2.2e-21 107.1 250 30.4
Potri.004G077301 Populus trichocarpa HOM05D007529 ORTHO05D007451 2.8e-21 106.7 164 37.8
Zm00001eb150670 Zea mays HOM05D007529 ORTHO05D007451 9.1e-20 101.7 272 33.5
FAN17G2871 Fragaria x ananassa HOM05D007529 ORTHO05D011815 3.4e-19 99.8 94 46.8
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 5.9e-19 99.0 120 39.2
AUR62026141 Chenopodium quinoa HOM05D007529 ORTHO05D007451 1.0e-18 98.2 136 41.2
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 3.8e-18 96.3 248 27.4
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 6.5e-18 95.5 170 35.9
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 4.2e-17 92.8 258 31.4
Nn1g01084 Nelumbo nucifera HOM05D007529 ORTHO05D007451 4.7e-16 89.4 105 46.7
SEGI_22599 Sequoiadendron giganteum HOM05D007529 ORTHO05D007451 8.0e-16 88.6 252 30.2
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 1.8e-15 87.4 112 44.6
FAN12G3498 Fragaria x ananassa HOM05D007529 ORTHO05D007451 9.7e-14 81.6 163 33.7
Cpa.g.sc5.217 Carica papaya HOM05D007529 ORTHO05D007451 1.7e-13 80.9 90 46.7
THA.LOC104825174 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 1.7e-13 80.9 147 32.7
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 1.1e-12 78.2 262 26.3
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 2.4e-12 77.0 254 27.2
SMO340G0132 Selaginella moellendorffii HOM05D027965 ORTHO05D007451 1.6e-11 74.3 300 25.0
FvH4_4g15602 Fragaria vesca HOM05D007529 ORTHO05D007451 3.5e-11 73.2 164 32.3
MELO3C014210.2 Cucumis melo HOM05D007529 ORTHO05D007451 1.0e-10 71.6 81 48.1
ClCG04G003940 Citrullus lanatus HOM05D007529 ORTHO05D007451 1.7e-10 70.9 80 45.0
FAN22G2112 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.7e-10 70.9 96 43.8
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 3.8e-10 69.7 250 25.6
CsaV3_4G021970 Cucumis sativus L. HOM05D007529 ORTHO05D007451 3.8e-10 69.7 81 45.7
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 5.0e-10 69.3 249 26.1
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 5.0e-10 69.3 249 26.1
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 8.5e-10 68.6 185 29.2
Thhalv10015674m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.1e-09 68.2 188 28.7
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 2.5e-09 67.0 250 25.2
AagrBONN_evm.TU.Sc2ySwM_368.1069 Anthoceros agrestis HOM05D027965 ORTHO05D007451 5.5e-09 65.9 295 23.7
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 5.5e-09 65.9 185 28.6
Cpa.g.sc5.218 Carica papaya HOM05D007529 ORTHO05D007451 5.5e-09 65.9 63 49.2
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 9.4e-09 65.1 250 24.8
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 9.4e-09 65.1 185 28.1
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 1.2e-08 64.7 249 22.9
Sp6g38750 Schrenkiella parvula HOM05D005503 ORTHO05D007451 1.2e-08 64.7 250 24.0
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.6e-08 64.3 256 25.0
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 2.1e-08 63.9 185 28.6
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 2.1e-08 63.9 183 25.7
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 2.1e-08 63.9 251 23.9
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 2.7e-08 63.5 250 24.8
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 2.7e-08 63.5 249 24.9
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 2.7e-08 63.5 250 24.8
Oeu026328.1 Olea europaea HOM05D000056 ORTHO05D000019 2.7e-08 63.5 61 45.9
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 4.7e-08 62.8 250 24.8
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 4.7e-08 62.8 250 24.8
FAN17G0844 Fragaria x ananassa HOM05D007529 ORTHO05D007451 6.1e-08 62.4 101 40.6
C04p51340 Brassica napus HOM05D005503 ORTHO05D007451 1.8e-07 60.8 252 24.2
BolC8t51531H Brassica oleracea HOM05D005503 ORTHO05D007451 1.8e-07 60.8 164 28.7
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 3.0e-07 60.1 154 28.6


User provided reference genes

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