Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 9.3e-59 231.1 249 100.0
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 1.9e-35 153.7 123 65.0
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 2.1e-34 150.2 249 85.1
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.9e-32 143.7 123 64.2
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.7e-31 140.6 123 61.0
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 2.2e-31 140.2 113 65.5
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 9.1e-30 134.8 122 60.7
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 2.0e-29 133.7 118 61.9
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 2.0e-29 133.7 123 69.1
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 3.4e-29 132.9 113 70.8
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 1.0e-28 131.3 113 69.9
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.3e-28 131.0 249 82.3
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 1.3e-28 131.0 104 73.1
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.1e-27 127.9 119 59.7
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 1.4e-27 127.5 124 66.9
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 2.5e-27 126.7 123 65.9
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 1.6e-26 124.0 113 58.4
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 2.1e-26 123.6 147 49.7
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.7e-26 123.2 124 56.5
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.6e-26 122.9 124 56.5
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.4e-25 120.9 131 54.2
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.8e-25 120.6 106 63.2
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 1.8e-25 120.6 123 62.6
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.8e-25 120.6 250 76.4
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 1.8e-25 120.6 113 54.9
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.0e-25 119.8 111 59.5
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.0e-25 119.8 111 59.5
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.0e-25 119.8 111 58.6
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 5.1e-25 119.0 106 61.3
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 6.7e-25 118.6 105 59.0
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.8e-25 118.2 111 61.3
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 1.5e-24 117.5 110 64.5
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 2.0e-24 117.1 111 57.7
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 2.0e-24 117.1 123 53.7
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 9.7e-24 114.8 123 52.8
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 2.8e-23 113.2 231 80.1
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 6.3e-23 112.1 100 57.0
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 6.3e-23 112.1 100 57.0
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 6.3e-23 112.1 100 57.0
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 6.3e-23 112.1 123 57.7
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 8.2e-23 111.7 231 81.4
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 8.2e-23 111.7 106 55.7
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 1.4e-22 110.9 123 60.2
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 1.8e-22 110.5 123 61.0
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 3.1e-22 109.8 122 60.7
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 5.3e-22 109.0 98 59.2
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 7.0e-22 108.6 249 76.7
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 1.5e-21 107.5 113 58.4
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 2.6e-21 106.7 111 61.3
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 3.4e-21 106.3 121 62.8
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 4.5e-21 105.9 123 57.7
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 4.5e-21 105.9 100 58.0
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 7.7e-21 105.1 249 76.3
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 7.7e-21 105.1 99 51.5
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 1.0e-20 104.8 123 54.5
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 1.3e-20 104.4 123 56.1
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 1.1e-19 101.3 107 62.6
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 5.5e-19 99.0 111 53.2
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 5.5e-19 99.0 123 55.3
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 5.5e-19 99.0 123 53.7
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 1.2e-18 97.8 96 52.1
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 3.6e-18 96.3 113 53.1
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 4.7e-18 95.9 119 55.5
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 6.1e-18 95.5 249 73.9
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 8.0e-18 95.1 113 57.5
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 1.0e-17 94.7 124 53.2
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 1.8e-17 94.0 123 54.5
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 3.0e-17 93.2 106 49.1
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 3.9e-17 92.8 249 75.1
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 5.2e-17 92.4 250 75.6
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.5e-16 90.9 123 52.0
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 2.0e-16 90.5 118 51.7
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 2.0e-16 90.5 101 56.4
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 2.0e-16 90.5 101 56.4
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 2.6e-16 90.1 123 52.8
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 3.3e-16 89.7 121 54.5
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 4.4e-16 89.4 100 57.0
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 4.4e-16 89.4 103 59.2
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 7.4e-16 88.6 117 54.7
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 9.7e-16 88.2 102 47.1
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 9.7e-16 88.2 119 52.1
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 2.2e-15 87.0 103 45.6
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 3.7e-15 86.3 250 73.6
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 4.1e-14 82.8 117 49.6
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 4.1e-14 82.8 123 50.4
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 7.0e-14 82.0 104 40.4
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 9.1e-14 81.6 104 45.2
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 1.2e-13 81.3 101 55.4
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 2.0e-13 80.5 100 56.0
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 2.6e-13 80.1 117 51.3
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 5.9e-13 79.0 123 47.2
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 7.7e-13 78.6 108 51.9
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 7.7e-13 78.6 118 51.7
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 1.0e-12 78.2 115 52.2
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.0e-12 78.2 98 55.1
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.3e-12 77.8 107 47.7
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 2.2e-12 77.0 103 49.5
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 3.8e-12 76.3 96 44.8
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 5.0e-12 75.9 96 41.7
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.1e-11 74.7 109 51.4
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.5e-11 74.3 119 47.9
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.9e-11 73.9 107 51.4
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 3.2e-11 73.2 106 49.1
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.2e-11 73.2 109 49.5
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 4.2e-11 72.8 96 50.0
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 4.2e-11 72.8 101 36.6
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 1.2e-10 71.2 107 50.5
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.2e-10 71.2 107 50.5
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 6.1e-10 68.9 111 35.1
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 6.1e-10 68.9 78 51.3
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 3.0e-09 66.6 117 45.3
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 5.2e-09 65.9 128 38.3
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.7e-07 60.8 82 43.9
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 3.7e-07 59.7 105 46.7
EL10Ac6g14964 Beta vulgaris HOM05D027931 ORTHO05D007861 5.3e-06 55.8 100 41.0


User provided reference genes

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