Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0545281 Helianthus annuus HOM05D001860 ORTHO05D004922 9.2e-173 610.1 311 100.0
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 9.3e-125 450.7 325 74.2
ECA246G1483 Erigeron canadensis HOM05D001860 ORTHO05D004922 2.0e-119 433.0 309 75.1
Hma1.2p1_1079F.1_g254970 Hydrangea macrophylla HOM05D001860 ORTHO05D004922 4.8e-97 358.6 261 68.6
Solyc06g084030.3 Solanum lycopersicum HOM05D001860 ORTHO05D004922 3.5e-95 352.4 263 68.8
Sopen06g035410 Solanum pennellii HOM05D001860 ORTHO05D004922 1.7e-94 350.1 263 68.4
Atru.chr11.1760 Acer truncatum HOM05D001860 ORTHO05D004922 8.5e-94 347.8 259 68.0
Ciclev10032245m.g Citrus clementina HOM05D001860 ORTHO05D004922 1.1e-93 347.4 301 62.8
TAR629G3174 Trochodendron aralioides HOM05D001860 ORTHO05D004922 1.5e-93 347.1 258 69.0
Thecc.02G343500 Theobroma cacao HOM05D001860 ORTHO05D004922 7.2e-93 344.7 257 67.3
CAN.G771.16 Capsicum annuum HOM05D001860 ORTHO05D004922 1.2e-92 344.0 262 67.6
CiPaw.06G086900 Carya illinoinensis HOM05D001860 ORTHO05D004922 2.7e-92 342.8 259 69.5
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 4.7e-92 342.0 258 66.7
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 1.8e-91 340.1 285 61.1
Haze_11992 Corylus avellana HOM05D001860 ORTHO05D004922 2.3e-91 339.7 274 65.3
MSTRG.7790 Avicennia marina HOM05D001860 ORTHO05D004922 3.0e-91 339.3 310 58.7
GSVIVG01019959001 Vitis vinifera HOM05D001860 ORTHO05D004922 3.9e-91 339.0 259 65.6
PGSC0003DMG400020063 Solanum tuberosum HOM05D001860 ORTHO05D004922 5.2e-91 338.6 245 69.4
TWI31G0055 Tripterygium wilfordii HOM05D001860 ORTHO05D004922 6.7e-91 338.2 259 64.5
QL03p068521 Quercus lobata HOM05D001860 ORTHO05D004922 8.8e-91 337.8 267 65.5
Lj3A1035T53 Lonicera japonica HOM05D001860 ORTHO05D004922 1.1e-90 337.4 224 76.3
CSS0022995 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 1.5e-90 337.0 275 60.4
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 2.0e-90 336.7 272 65.4
Phvul.002G083300 Phaseolus vulgaris HOM05D001860 ORTHO05D004922 5.7e-90 335.1 295 59.3
Potri.008G088500 Populus trichocarpa HOM05D001860 ORTHO05D004922 1.3e-89 334.0 301 58.8
Rhsim12G0064600 Rhododendron simsii HOM05D001860 ORTHO05D004922 2.8e-89 332.8 259 64.1
RcHm_v2.0_Chr4g0439511 Rosa chinensis HOM05D001860 ORTHO05D004922 4.8e-89 332.0 275 62.5
CANSAT64G2732 Cannabis sativa HOM05D001860 ORTHO05D004922 1.8e-88 330.1 258 65.5
Glyma.02G109300 Glycine max HOM05D001860 ORTHO05D004922 1.8e-88 330.1 260 63.8
Oeu028270.1 Olea europaea HOM05D001860 ORTHO05D004922 2.4e-88 329.7 276 63.4
Peaxi162Scf01530g00038 Petunia axillaris HOM05D001860 ORTHO05D004922 2.4e-88 329.7 226 72.6
EL10Ac6g13236 Beta vulgaris HOM05D001860 ORTHO05D004922 7.0e-88 328.2 259 61.8
Nn3g17288 Nelumbo nucifera HOM05D001860 ORTHO05D004922 7.0e-88 328.2 286 60.8
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 9.1e-88 327.8 303 57.8
Ca_04822_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004922 2.0e-87 326.6 261 60.9
QL03p068489 Quercus lobata HOM05D001860 ORTHO05D004922 2.0e-87 326.6 254 65.4
Duzib248G0566 Durio zibethinus HOM05D001860 ORTHO05D004922 2.6e-87 326.2 257 65.4
MELO3C012111.2 Cucumis melo HOM05D001860 ORTHO05D004922 3.5e-87 325.9 286 59.4
QL03p068503 Quercus lobata HOM05D001860 ORTHO05D004922 3.5e-87 325.9 254 64.6
Nitab4.5_0006433g0040 Nicotiana tabacum HOM05D001860 ORTHO05D004922 4.5e-87 325.5 221 71.9
DCAR_026253 Daucus carota HOM05D001016 ORTHO05D003396 1.0e-86 324.3 301 59.1
Manes.05G104100 Manihot esculenta HOM05D001860 ORTHO05D004922 1.0e-86 324.3 260 65.0
Nitab4.5_0001044g0130 Nicotiana tabacum HOM05D001860 ORTHO05D004922 1.0e-86 324.3 222 71.6
Medtr5g041780 Medicago truncatula HOM05D001860 ORTHO05D004922 1.3e-86 323.9 263 60.5
PSO478G0757 Papaver somniferum HOM05D001860 ORTHO05D004922 1.3e-86 323.9 262 63.0
arahy.Tifrunner.gnm1.ann1.0UW6S5 Arachis hypogaea HOM05D001860 ORTHO05D004922 6.5e-86 321.6 291 58.8
CsaV3_5G032900 Cucumis sativus L. HOM05D001860 ORTHO05D004922 8.5e-86 321.2 286 58.7
Lj2g0002858 Lotus japonicus HOM05D001860 ORTHO05D004922 8.5e-86 321.2 276 59.4
Aqoxy5G04114 Aquilegia oxysepala HOM05D001860 ORTHO05D004922 1.1e-85 320.9 312 57.1
Eucgr.B03211 Eucalyptus grandis HOM05D001860 ORTHO05D004922 1.1e-85 320.9 314 56.1
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.9e-85 320.1 302 57.0
CsaV3_5G032890 Cucumis sativus L. HOM05D001860 ORTHO05D004922 4.2e-85 318.9 262 61.5
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 7.2e-85 318.2 304 56.2
Migut.L01273 Erythranthe guttata HOM05D001860 ORTHO05D004922 9.4e-85 317.8 224 71.4
vmacro01268 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 2.1e-84 316.6 297 56.6
Psat2g116760 Pisum sativum HOM05D001860 ORTHO05D004922 2.7e-84 316.2 258 58.5
Sed0020595 Sechium edule HOM05D001860 ORTHO05D004922 2.7e-84 316.2 270 59.3
PSO017G0798 Papaver somniferum HOM05D001860 ORTHO05D004922 3.6e-84 315.8 262 63.0
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 4.7e-84 315.5 257 63.0
FvH4_4g31120 Fragaria vesca HOM05D001860 ORTHO05D004922 1.8e-83 313.5 304 56.9
MBI05_g10765_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004922 2.3e-83 313.2 261 59.8
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 6.8e-83 311.6 279 59.9
MD16G1070300 Malus domestica HOM05D001860 ORTHO05D004922 1.5e-82 310.5 297 56.2
Os02g0744100 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004922 3.4e-82 309.3 260 60.0
SGA_v2.0_scaffold172G38956 Striga asiatica HOM05D001860 ORTHO05D004922 3.4e-82 309.3 283 58.7
Cc11_g12800 Coffea canephora HOM05D001860 ORTHO05D004922 7.5e-82 308.1 259 62.2
arahy.Tifrunner.gnm1.ann1.F2WL4X Arachis hypogaea HOM05D001860 ORTHO05D004922 8.3e-81 304.7 320 53.1
Sp5g24630 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.1e-80 304.3 305 54.4
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 1.4e-80 303.9 305 56.4
AT1G69523 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 3.1e-80 302.8 308 51.9
arahy.Tifrunner.gnm1.ann1.WF3EDY Arachis hypogaea HOM05D001860 ORTHO05D004922 5.3e-80 302.0 320 52.8
unitig_26.g10298 Utricularia gibba HOM05D001860 ORTHO05D004922 7.0e-80 301.6 301 53.2
Sabra08G0066100 Salix brachista HOM05D001860 ORTHO05D004922 1.6e-79 300.4 396 47.2
TPR.G36138 Trifolium pratense HOM05D001860 ORTHO05D004922 2.0e-79 300.1 221 63.8
ATR0564G196 Amborella trichopoda HOM05D001860 ORTHO05D004922 2.7e-79 299.7 295 52.2
CDE04G1474 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 2.7e-79 299.7 262 59.2
A07p35850 Brassica napus HOM05D001860 ORTHO05D004922 3.5e-79 299.3 268 57.5
Hund25222 Selenicereus undatus HOM05D001860 ORTHO05D004922 3.5e-79 299.3 269 58.4
C06p40330 Brassica napus HOM05D001860 ORTHO05D004922 7.7e-79 298.1 268 57.5
THA.LOC104822044 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 2.2e-78 296.6 291 55.0
BcaB03g14715 Brassica carinata HOM05D001860 ORTHO05D004922 3.8e-78 295.8 281 53.4
Carub.0002s1616 Capsella rubella HOM05D001860 ORTHO05D004922 3.8e-78 295.8 307 53.1
AUR62032811 Chenopodium quinoa HOM05D001860 ORTHO05D004922 3.8e-78 295.8 224 64.3
Lalb_Chr04g0255941 Lupinus albus HOM05D001860 ORTHO05D004922 5.0e-78 295.4 330 50.6
Zm00001eb194590 Zea mays HOM05D001860 ORTHO05D004922 5.0e-78 295.4 259 58.7
vmacro01267 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 1.1e-77 294.3 340 49.4
BcaB03g14720 Brassica carinata HOM05D001860 ORTHO05D004922 1.9e-77 293.5 306 53.3
BcaC08g46392 Brassica carinata HOM05D001860 ORTHO05D004922 2.5e-77 293.1 263 57.4
BolC6t39396H Brassica oleracea HOM05D001860 ORTHO05D004922 3.2e-77 292.7 282 53.5
BolC6t39398H Brassica oleracea HOM05D001860 ORTHO05D004922 9.4e-77 291.2 282 53.2
MELO3C012110.2 Cucumis melo HOM05D001860 ORTHO05D004922 9.4e-77 291.2 290 54.5
BolC6t39399H Brassica oleracea HOM05D001860 ORTHO05D004922 1.2e-76 290.8 266 56.4
C06p40340 Brassica napus HOM05D001860 ORTHO05D004922 2.7e-76 289.7 282 53.2
Aa31LG4G11250 Aethionema arabicum HOM05D001860 ORTHO05D004922 4.7e-76 288.9 308 51.0
HPP92_016837 Vanilla planifolia HOM05D001860 ORTHO05D004922 4.7e-76 288.9 267 55.1
AL2G28650 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 1.4e-75 287.3 310 50.6
BraA07t31170Z Brassica rapa HOM05D001860 ORTHO05D004922 1.4e-75 287.3 266 55.3
A07p35840 Brassica napus HOM05D001860 ORTHO05D004922 5.2e-75 285.4 266 54.5
BraA07t31171Z Brassica rapa HOM05D001860 ORTHO05D004922 5.2e-75 285.4 260 56.9
Carub.0002s1615 Capsella rubella HOM05D001860 ORTHO05D004922 5.2e-75 285.4 275 54.2
A07p35830 Brassica napus HOM05D001860 ORTHO05D004922 6.8e-75 285.0 266 54.5
BraA07t31169Z Brassica rapa HOM05D001860 ORTHO05D004922 6.8e-75 285.0 266 54.5
SEGI_35280 Sequoiadendron giganteum HOM05D001860 ORTHO05D004922 6.8e-75 285.0 268 55.6
Thhalv10018913m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 2.6e-74 283.1 321 50.8
CARHR062460 Cardamine hirsuta HOM05D001860 ORTHO05D004922 4.4e-74 282.3 290 52.1
BraA07t30786Z Brassica rapa HOM05D001860 ORTHO05D004922 2.4e-72 276.6 262 56.5
BcaC08g46390 Brassica carinata HOM05D001860 ORTHO05D004922 5.4e-72 275.4 253 54.2
THA.LOC104822045 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 9.1e-72 274.6 289 52.2
BcaB03g15478 Brassica carinata HOM05D001860 ORTHO05D004922 2.0e-71 273.5 310 49.4
CDE06G2440 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 5.9e-71 271.9 234 56.8
AT1G69526 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 3.8e-70 269.2 311 48.6
SMO239G0167 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 3.8e-70 269.2 301 48.5
Carub.0002s1617 Capsella rubella HOM05D001860 ORTHO05D004922 1.9e-69 266.9 311 47.9
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 3.3e-69 266.2 299 52.5
Sp5g24640 Schrenkiella parvula HOM05D001860 ORTHO05D004922 3.3e-69 266.2 272 52.9
C06p40360 Brassica napus HOM05D001860 ORTHO05D004922 9.5e-69 264.6 247 54.3
THA.LOC104822184 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 2.8e-68 263.1 223 60.1
AagrBONN_evm.TU.Sc2ySwM_368.914 Anthoceros agrestis HOM05D001860 ORTHO05D004922 1.0e-67 261.2 254 53.1
Pp3c24_6910 Physcomitrium patens HOM05D001860 ORTHO05D004922 1.3e-65 254.2 223 54.7
Prupe.1G276900 Prunus persica HOM05D001860 ORTHO05D004922 1.1e-64 251.1 211 62.6
Gohir.D13G076400 Gossypium hirsutum HOM05D001860 ORTHO05D004922 2.9e-62 243.0 193 63.7
PGR102G3336 Punica granatum HOM05D001860 ORTHO05D004922 5.0e-62 242.3 179 67.0
Mapoly0002s0191 Marchantia polymorpha HOM05D001860 ORTHO05D004922 6.6e-62 241.9 258 48.4
Gohir.A13G076700 Gossypium hirsutum HOM05D001860 ORTHO05D004922 5.6e-61 238.8 226 57.5
CARHR062480 Cardamine hirsuta HOM05D001860 ORTHO05D004922 1.3e-57 227.6 202 58.9
BcaC08g46388 Brassica carinata HOM05D001860 ORTHO05D004922 2.0e-55 220.3 206 53.9
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 6.0e-55 218.8 206 54.4
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 6.0e-55 218.8 206 53.4
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 2.3e-54 216.9 206 53.4
AL2G28640 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 3.9e-54 216.1 218 50.9
BcaB03g14714 Brassica carinata HOM05D001860 ORTHO05D004922 3.9e-54 216.1 206 53.9
Thhalv10019583m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 5.0e-54 215.7 206 54.9
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 5.6e-53 212.2 219 50.7
AT1G69520 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 3.1e-51 206.5 210 51.4
CARHR062450 Cardamine hirsuta HOM05D001860 ORTHO05D004922 6.8e-51 205.3 219 50.7
Sp5g24610 Schrenkiella parvula HOM05D001860 ORTHO05D004922 6.8e-51 205.3 215 50.2
CSS0019961 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 2.2e-49 200.3 163 62.0
Ah.02g129590 Amaranthus hybridus HOM05D001860 ORTHO05D004922 6.4e-49 198.7 307 40.7
Sc11g0002060 Simmondsia chinensis HOM05D001860 ORTHO05D004922 6.0e-47 192.2 169 60.4
C06p40380 Brassica napus HOM05D001482 ORTHO05D001499 1.3e-46 191.0 227 47.1
Sp5g24620 Schrenkiella parvula HOM05D001860 ORTHO05D004922 4.0e-43 179.5 143 60.8
SMO137G0248 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 4.0e-43 179.5 207 46.9
Oeu028272.1 Olea europaea HOM05D001860 ORTHO05D004922 8.9e-43 178.3 125 71.2
Dinv16666 Davidia involucrata HOM05D001860 ORTHO05D004922 5.8e-42 175.6 189 52.9
AUR62005816 Chenopodium quinoa HOM05D001860 ORTHO05D004922 7.6e-42 175.3 138 61.6
BcaB03g14717 Brassica carinata HOM05D001860 ORTHO05D004922 9.9e-42 174.9 168 52.4
Aa31LG4G11270 Aethionema arabicum HOM05D001860 ORTHO05D004922 4.9e-41 172.6 237 44.3
C06p40370 Brassica napus HOM05D001860 ORTHO05D004922 2.8e-36 156.8 120 64.2
BcaC08g45887 Brassica carinata HOM05D001860 ORTHO05D004922 6.2e-36 155.6 131 60.3
MCO03G556 Micromonas commoda HOM05D001860 ORTHO05D004922 1.1e-35 154.8 238 41.2
Thhalv10019188m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 1.8e-35 154.1 151 55.0
A07p31570 Brassica napus HOM05D001860 ORTHO05D004922 4.0e-35 152.9 120 64.2
CBR_g41443 Chara braunii HOM05D001860 ORTHO05D004922 1.5e-34 151.0 264 36.0
Cpa.g.sc350.4 Carica papaya HOM05D001860 ORTHO05D004922 2.0e-34 150.6 131 64.9
C06p36870 Brassica napus HOM05D000005 ORTHO05D042562 5.8e-34 149.1 120 63.3
BolC6t38800H Brassica oleracea HOM05D000005 ORTHO05D042562 5.8e-34 149.1 258 39.9
MCO09G753 Micromonas commoda HOM05D001860 ORTHO05D004922 5.1e-30 136.0 145 46.2
PRCOL_00003589 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 8.7e-30 135.2 181 42.0
PRCOL_00000783 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 5.3e-27 125.9 195 37.9
Cre07.g342550 Chlamydomonas reinhardtii HOM05D001860 ORTHO05D004922 1.2e-26 124.8 251 33.9
CSS0034144 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 1.2e-23 114.8 83 65.1
CSS0016207 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 5.6e-21 105.9 75 64.0
Actinidia19883 Actinidia chinensis HOM05D001860 ORTHO05D004922 2.9e-17 93.6 105 51.4
VMungo1383G2064 Vigna mungo HOM05D001860 ORTHO05D004922 3.8e-17 93.2 91 51.6
Thecc.01G276100 Theobroma cacao HOM05D001860 ORTHO05D004922 3.9e-14 83.2 85 54.1
MCO03G203 Micromonas commoda HOM05D023757 ORTHO05D024904 4.3e-13 79.7 160 34.4
arahy.Tifrunner.gnm1.ann1.661SM0 Arachis hypogaea HOM05D001860 ORTHO05D004922 6.2e-12 75.9 87 52.9
CBR_g34579 Chara braunii HOM05D001860 ORTHO05D019626 2.4e-11 73.9 178 34.3
PRCOL_00001331 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 2.2e-09 67.4 150 30.7
HanXRQChr14g0429031 Helianthus annuus HOM05D001860 ORTHO05D223518 1.9e-08 64.3 34 85.3
Zm00001eb254460 Zea mays HOM05D001860 ORTHO05D004922 1.9e-08 64.3 76 47.4
Cfa024139 Carpinus fangiana HOM05D001860 ORTHO05D004922 1.2e-07 61.6 149 30.2
MCO11G161 Micromonas commoda HOM05D019459 ORTHO05D019626 3.5e-07 60.1 139 34.5
TPR.G39184 Trifolium pratense HOM05D001860 ORTHO05D004922 7.9e-07 58.9 57 47.4
Mapoly0068s0103 Marchantia polymorpha HOM05D019459 ORTHO05D019626 3.0e-06 57.0 178 27.5
MCO11G703 Micromonas commoda HOM05D001535 ORTHO05D004010 3.9e-06 56.6 208 25.5
CDE08G0834 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 8.7e-06 55.5 58 48.3


User provided reference genes

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