Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 2.3e-108 395.6 203 100.0
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 6.8e-68 261.2 190 75.3
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 1.5e-62 243.4 212 67.0
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 2.6e-59 232.6 204 63.2
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 7.3e-54 214.5 205 62.4
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 1.8e-52 209.9 214 57.0
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 6.9e-52 208.0 208 56.7
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 1.5e-51 206.8 221 54.8
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 2.2e-50 203.0 208 56.7
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 8.4e-50 201.1 207 57.5
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 1.9e-49 199.9 214 55.1
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 5.4e-49 198.4 227 51.5
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 7.1e-49 198.0 207 56.5
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 2.1e-48 196.4 219 54.3
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 3.5e-48 195.7 211 54.0
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.3e-47 193.7 208 53.8
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 1.7e-47 193.4 211 53.6
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.7e-47 193.4 211 53.6
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 2.3e-47 193.0 206 57.3
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 3.0e-47 192.6 204 53.9
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 3.9e-47 192.2 208 55.8
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 5.1e-47 191.8 215 54.9
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 1.5e-46 190.3 207 55.1
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.9e-46 189.9 207 54.6
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 1.9e-46 189.9 208 55.8
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 1.9e-46 189.9 207 55.1
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 4.3e-46 188.7 204 55.4
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 5.6e-46 188.3 203 52.7
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 5.6e-46 188.3 211 53.1
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 7.3e-46 188.0 204 55.4
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 9.6e-46 187.6 215 53.0
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.3e-45 187.2 208 53.8
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 1.6e-45 186.8 211 53.1
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 2.8e-45 186.0 206 55.8
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 4.8e-45 185.3 207 55.6
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 6.2e-45 184.9 207 52.2
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 4.0e-44 182.2 211 51.2
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 9.0e-44 181.0 208 52.4
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.6e-43 179.5 213 52.1
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 4.5e-43 178.7 213 51.2
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.5e-43 178.7 213 51.6
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 4.5e-43 178.7 217 53.5
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 5.8e-43 178.3 208 52.4
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 9.9e-43 177.6 206 51.9
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 2.2e-42 176.4 204 54.4
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 2.9e-42 176.0 226 47.3
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 8.4e-42 174.5 213 50.7
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 8.4e-42 174.5 203 51.2
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 1.4e-41 173.7 204 52.0
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 1.9e-41 173.3 204 52.5
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 2.4e-41 172.9 204 51.5
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 3.2e-41 172.6 211 48.8
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 3.2e-41 172.6 208 52.4
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 3.2e-41 172.6 204 52.9
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 7.1e-41 171.4 204 50.0
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 7.1e-41 171.4 213 49.8
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 2.1e-40 169.9 210 50.0
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 3.5e-40 169.1 201 50.7
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 3.5e-40 169.1 206 54.9
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 1.0e-39 167.5 208 47.1
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 1.0e-39 167.5 209 46.9
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 1.0e-39 167.5 209 46.9
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 1.0e-39 167.5 211 49.3
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 1.3e-39 167.2 209 46.4
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 1.3e-39 167.2 205 50.2
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 3.0e-39 166.0 212 49.1
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 3.0e-39 166.0 214 49.5
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 3.9e-39 165.6 211 53.1
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 1.5e-38 163.7 236 45.3
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 7.4e-38 161.4 223 48.9
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 7.4e-38 161.4 214 47.2
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 9.6e-38 161.0 206 48.5
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.1e-37 159.8 154 57.1
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 4.8e-37 158.7 262 42.7
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 6.2e-37 158.3 150 54.7
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 8.1e-37 157.9 208 46.6
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 6.9e-36 154.8 215 47.9
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 1.2e-35 154.1 212 45.3
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.5e-35 153.7 203 46.3
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 2.6e-35 152.9 212 48.1
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 5.8e-35 151.8 211 46.9
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 7.6e-35 151.4 203 46.3
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 1.0e-34 151.0 203 46.8
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 1.3e-34 150.6 205 46.3
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 4.9e-34 148.7 168 49.4
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 6.5e-34 148.3 213 46.9
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 1.1e-33 147.5 130 61.5
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.1e-33 147.5 214 44.4
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 1.9e-33 146.7 212 45.3
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 2.5e-33 146.4 199 47.7
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.2e-32 144.1 161 52.2
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 2.7e-32 142.9 210 44.8
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 1.8e-31 140.2 152 48.0
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 1.5e-30 137.1 117 65.8
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.4e-28 130.6 124 58.1
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.1e-25 120.9 206 40.8
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 1.9e-25 120.2 205 41.5
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.1e-24 116.7 126 52.4
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 3.7e-21 105.9 154 43.5
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.4e-15 87.4 127 43.3
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 2.2e-13 80.1 87 55.2
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.1e-12 77.8 90 48.9
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 5.0e-10 68.9 124 42.7


User provided reference genes

Program Settings