Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 4.5e-109 397.9 197 100.0
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 3.4e-80 302.0 195 77.4
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 7.1e-62 241.1 144 82.6
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 5.6e-59 231.5 192 63.5
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 3.6e-58 228.8 192 62.5
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 4.0e-57 225.3 191 62.8
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 1.5e-56 223.4 142 73.2
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 2.6e-56 222.6 142 73.2
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 3.4e-56 222.2 197 60.4
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 3.4e-56 222.2 140 75.0
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 4.5e-56 221.9 142 73.2
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 4.5e-56 221.9 143 72.0
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 9.9e-56 220.7 140 77.9
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 9.9e-56 220.7 140 75.7
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 1.7e-55 219.9 197 59.9
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 1.7e-55 219.9 168 67.9
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 2.2e-55 219.5 199 60.8
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 2.2e-55 219.5 140 73.6
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 3.8e-55 218.8 200 59.5
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 4.9e-55 218.4 192 59.9
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 6.4e-55 218.0 186 61.3
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 8.4e-55 217.6 188 62.8
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 8.4e-55 217.6 188 62.8
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 8.4e-55 217.6 137 73.7
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 8.4e-55 217.6 139 73.4
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 8.4e-55 217.6 140 73.6
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.4e-54 216.9 120 89.2
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 1.9e-54 216.5 170 65.9
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 2.4e-54 216.1 126 80.2
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 3.2e-54 215.7 196 60.2
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 3.2e-54 215.7 140 71.4
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 3.2e-54 215.7 196 58.2
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 4.2e-54 215.3 126 80.2
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 4.2e-54 215.3 197 58.9
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 4.2e-54 215.3 193 61.1
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 5.4e-54 214.9 126 80.2
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 5.4e-54 214.9 198 59.6
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.4e-54 214.9 198 61.6
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 9.3e-54 214.2 196 59.7
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.2e-53 213.8 136 72.8
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 1.2e-53 213.8 196 58.7
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 1.2e-53 213.8 192 60.4
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 1.2e-53 213.8 167 62.9
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 1.2e-53 213.8 139 71.2
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 1.6e-53 213.4 126 79.4
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 2.1e-53 213.0 150 68.7
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 2.7e-53 212.6 168 62.5
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 2.7e-53 212.6 192 58.3
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 2.7e-53 212.6 191 58.1
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 3.5e-53 212.2 155 65.2
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 3.5e-53 212.2 175 62.3
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 3.5e-53 212.2 176 61.9
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 4.6e-53 211.8 179 62.0
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 6.0e-53 211.5 196 59.2
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 6.0e-53 211.5 178 60.7
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 6.0e-53 211.5 189 56.6
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 6.0e-53 211.5 189 56.6
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 7.9e-53 211.1 140 72.1
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 7.9e-53 211.1 140 68.6
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 1.3e-52 210.3 192 57.8
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 1.8e-52 209.9 140 67.9
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 1.8e-52 209.9 136 69.9
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.3e-52 209.5 140 68.6
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 2.3e-52 209.5 192 56.8
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 2.3e-52 209.5 140 70.0
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 3.0e-52 209.1 140 67.9
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 6.7e-52 208.0 140 69.3
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 8.7e-52 207.6 136 72.8
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 8.7e-52 207.6 176 63.6
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.1e-51 207.2 161 67.1
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.1e-51 207.2 139 69.1
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 1.5e-51 206.8 193 57.5
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 1.9e-51 206.5 123 75.6
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.9e-51 206.5 133 72.2
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 4.3e-51 205.3 181 60.2
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 4.3e-51 205.3 189 55.6
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 7.4e-51 204.5 141 69.5
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 9.6e-51 204.1 136 70.6
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 9.6e-51 204.1 140 69.3
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 9.6e-51 204.1 139 69.1
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 3.7e-50 202.2 197 55.3
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.7e-50 202.2 182 59.9
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 6.2e-50 201.4 161 63.4
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 1.4e-49 200.3 169 57.4
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 1.8e-49 199.9 124 71.8
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 2.4e-49 199.5 181 59.1
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 5.3e-49 198.4 148 65.5
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 9.0e-49 197.6 141 66.0
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 2.6e-48 196.1 176 59.1
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 7.6e-48 194.5 164 59.8
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 1.0e-47 194.1 176 57.4
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 4.9e-47 191.8 135 63.7
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 6.5e-47 191.4 176 56.8
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 8.4e-47 191.0 176 55.7
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.1e-46 190.7 111 78.4
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 1.4e-46 190.3 204 52.5
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 2.5e-46 189.5 185 53.5
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.5e-46 189.5 135 65.2
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 1.8e-44 183.3 157 57.3
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 3.9e-44 182.2 120 70.8
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 8.7e-44 181.0 240 45.8
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 2.5e-43 179.5 121 66.1
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 5.7e-43 178.3 112 73.2
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 1.3e-42 177.2 215 50.7
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 4.0e-41 172.2 116 69.0
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 5.3e-41 171.8 116 65.5
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 4.5e-40 168.7 110 70.0
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 8.4e-39 164.5 122 65.6
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.1e-38 164.1 91 83.5
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 1.2e-37 160.6 115 66.1
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 6.1e-37 158.3 126 58.7
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 1.8e-36 156.8 123 56.1
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 2.3e-36 156.4 153 56.2
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 2.8e-34 149.4 93 76.3
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 2.8e-34 149.4 146 59.6
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 6.3e-34 148.3 127 63.8
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 6.3e-34 148.3 96 74.0
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 5.3e-33 145.2 97 72.2
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 2.0e-32 143.3 95 70.5
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 1.9e-30 136.7 109 59.6
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 1.9e-30 136.7 109 58.7
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 2.1e-29 133.3 90 64.4
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 2.2e-26 123.2 129 45.0
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 3.7e-26 122.5 73 74.0
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 8.2e-26 121.3 113 51.3
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 3.9e-20 102.4 90 48.9
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 1.1e-19 100.9 93 57.0
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.7e-18 97.1 111 44.1
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 1.4e-17 94.0 70 67.1
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 4.5e-16 89.0 122 47.5
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 1.7e-15 87.0 78 60.3
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 9.4e-14 81.3 112 37.5
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 1.8e-09 67.0 42 76.2
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 2.6e-08 63.2 138 37.7
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 2.5e-06 56.6 121 28.9


User provided reference genes

Program Settings