Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 3.8e-80 301.6 171 100.0
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 2.9e-59 232.3 173 83.2
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.6e-54 216.5 173 71.1
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 6.8e-53 211.1 175 66.3
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 6.8e-53 211.1 180 68.9
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 8.9e-53 210.7 174 69.0
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 8.9e-53 210.7 176 68.8
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 1.5e-52 209.9 176 67.0
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 2.6e-52 209.1 172 69.8
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 5.8e-52 208.0 174 69.0
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 5.8e-52 208.0 185 63.8
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 7.6e-52 207.6 176 67.6
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 9.9e-52 207.2 175 68.6
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 9.9e-52 207.2 175 68.6
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 9.9e-52 207.2 175 67.4
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.7e-51 206.5 174 68.4
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 2.9e-51 205.7 173 69.9
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.7e-51 205.3 178 68.5
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.7e-51 205.3 173 67.6
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.9e-51 204.9 178 68.5
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 4.9e-51 204.9 175 70.3
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 4.9e-51 204.9 175 68.0
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 4.9e-51 204.9 175 67.4
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 6.4e-51 204.5 172 70.3
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 8.3e-51 204.1 173 67.1
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 8.3e-51 204.1 179 67.6
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 8.3e-51 204.1 178 67.4
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 8.3e-51 204.1 172 70.3
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.1e-50 203.8 176 70.5
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 1.1e-50 203.8 173 68.2
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 1.4e-50 203.4 176 65.9
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 1.4e-50 203.4 172 73.3
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.4e-50 202.6 175 69.7
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 2.4e-50 202.6 172 69.8
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.2e-50 202.2 177 66.1
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 4.1e-50 201.8 176 66.5
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.1e-50 201.8 176 66.5
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.1e-50 201.8 176 66.5
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 5.4e-50 201.4 178 68.0
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 7.1e-50 201.1 179 64.2
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 9.2e-50 200.7 176 71.6
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.2e-49 200.3 172 65.7
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 1.2e-49 200.3 173 65.9
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.1e-49 199.5 179 65.4
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 2.7e-49 199.1 172 69.2
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 2.7e-49 199.1 175 65.7
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 3.5e-49 198.7 172 65.7
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 6.0e-49 198.0 171 70.8
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 7.8e-49 197.6 175 64.6
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 7.8e-49 197.6 171 69.6
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.0e-48 197.2 178 64.0
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.0e-48 197.2 176 70.5
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 1.3e-48 196.8 177 62.7
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 2.3e-48 196.1 178 63.5
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 3.0e-48 195.7 180 63.9
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 3.0e-48 195.7 177 70.1
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 3.9e-48 195.3 180 67.8
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 3.9e-48 195.3 176 63.6
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 3.9e-48 195.3 173 65.9
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 6.6e-48 194.5 175 63.4
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 8.6e-48 194.1 179 66.5
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.1e-47 193.7 178 62.9
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 1.5e-47 193.4 174 67.2
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.9e-47 193.0 171 64.3
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 3.3e-47 192.2 179 62.0
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 3.3e-47 192.2 179 65.4
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 4.3e-47 191.8 172 64.5
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 5.6e-47 191.4 174 70.7
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 7.3e-47 191.0 175 65.1
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 7.3e-47 191.0 179 61.5
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.2e-46 190.3 174 70.1
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.2e-46 190.3 167 62.9
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 1.6e-46 189.9 166 62.7
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 8.1e-46 187.6 174 64.4
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.8e-45 186.4 110 84.5
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 3.1e-45 185.7 177 62.1
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 4.0e-45 185.3 110 83.6
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 8.9e-45 184.1 181 60.8
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 8.9e-45 184.1 174 65.5
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 8.9e-45 184.1 133 70.7
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.2e-44 183.7 179 60.9
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 2.0e-44 183.0 174 60.3
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 4.4e-44 181.8 130 73.1
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 4.4e-44 181.8 179 61.5
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 5.8e-44 181.4 177 65.5
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 5.8e-44 181.4 176 63.6
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 2.2e-43 179.5 178 61.2
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 2.9e-43 179.1 173 61.8
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 2.9e-43 179.1 173 62.4
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 3.8e-43 178.7 130 74.6
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 4.9e-43 178.3 175 60.0
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 4.9e-43 178.3 175 60.0
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 4.9e-43 178.3 137 70.1
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 6.4e-43 177.9 174 61.5
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 8.4e-43 177.6 129 69.0
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.1e-42 177.2 183 60.7
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 2.4e-42 176.0 173 59.0
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 3.2e-42 175.6 181 58.0
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 3.2e-42 175.6 184 57.6
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 3.2e-42 175.6 110 79.1
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 4.2e-42 175.3 172 59.3
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 4.2e-42 175.3 113 75.2
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 5.4e-42 174.9 175 58.9
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 7.1e-42 174.5 175 59.4
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 7.1e-42 174.5 111 78.4
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 7.1e-42 174.5 180 59.4
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 1.2e-41 173.7 173 58.4
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 2.7e-41 172.6 178 58.4
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 4.6e-41 171.8 103 81.6
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 3.0e-40 169.1 127 70.1
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 3.9e-40 168.7 179 58.1
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 3.9e-40 168.7 179 58.1
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 4.3e-39 165.2 164 59.8
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 9.6e-39 164.1 174 58.6
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 2.2e-35 152.9 110 68.2
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 5.1e-32 141.7 85 78.8
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.3e-30 137.1 139 61.9
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 2.1e-30 136.3 133 54.9
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.8e-29 133.3 161 49.1
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 6.9e-29 131.3 170 47.1
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 5.8e-28 128.3 128 52.3
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 1.7e-27 126.7 117 55.6
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.4e-26 122.9 144 52.8
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 8.1e-22 107.8 126 57.9
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 7.6e-20 101.3 130 43.1
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 1.3e-19 100.5 139 43.9
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 1.7e-19 100.1 129 51.9
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 3.5e-17 92.4 170 45.3
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.3e-06 57.4 98 27.6


User provided reference genes

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