Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0542001 Helianthus annuus HOM05D010440 ORTHO05D000119 9.1e-64 246.5 106 100.0
HanXRQChr17g0542021 Helianthus annuus HOM05D010440 ORTHO05D000119 1.9e-53 212.2 103 88.3
HanXRQChr17g0542011 Helianthus annuus HOM05D010440 ORTHO05D000119 8.0e-36 153.7 103 67.0
Lsat_1_v5_gn_5_76320 Lactuca sativa HOM05D010440 ORTHO05D000119 9.5e-29 130.2 103 59.2
Lsat_1_v5_gn_5_76220 Lactuca sativa HOM05D010440 ORTHO05D000119 8.0e-28 127.1 103 57.3
Lsat_1_v5_gn_5_76600 Lactuca sativa HOM05D010440 ORTHO05D000119 2.2e-25 119.0 84 61.9
Lsat_1_v5_gn_9_62781 Lactuca sativa HOM05D010440 ORTHO05D000119 2.9e-25 118.6 104 51.0
HanXRQChr17g0541971 Helianthus annuus HOM05D010440 ORTHO05D000119 1.9e-21 105.9 103 47.6
Lsat_1_v5_gn_5_38501 Lactuca sativa HOM05D010440 ORTHO05D000119 3.6e-20 101.7 101 43.6
Lsat_1_v5_gn_3_37180 Lactuca sativa HOM05D010440 ORTHO05D000119 2.4e-16 89.0 99 41.4
Lsat_1_v5_gn_5_82000 Lactuca sativa HOM05D010440 ORTHO05D000119 2.4e-16 89.0 84 45.2
Lsat_1_v5_gn_5_81281 Lactuca sativa HOM05D010440 ORTHO05D000119 9.2e-16 87.0 84 46.4
Lsat_1_v5_gn_3_37240 Lactuca sativa HOM05D010440 ORTHO05D000119 7.8e-15 84.0 97 40.2
HanXRQChr10g0295941 Helianthus annuus HOM05D000256 ORTHO05D000119 1.3e-14 83.2 100 39.0
HanXRQChr07g0197691 Helianthus annuus HOM05D000256 ORTHO05D000119 1.7e-14 82.8 86 43.0
Lsat_1_v5_gn_5_89960 Lactuca sativa HOM05D000256 ORTHO05D000119 2.3e-14 82.4 99 40.4
HanXRQChr07g0197701 Helianthus annuus HOM05D000256 ORTHO05D000119 3.9e-14 81.6 86 43.0
HanXRQChr07g0197601 Helianthus annuus HOM05D000256 ORTHO05D000119 5.1e-14 81.3 86 43.0
HanXRQChr10g0309341 Helianthus annuus HOM05D000256 ORTHO05D000119 8.6e-14 80.5 84 45.2
HanXRQChr10g0311181 Helianthus annuus HOM05D000256 ORTHO05D000119 1.5e-13 79.7 86 43.0
HanXRQChr02g0059401 Helianthus annuus HOM05D000256 ORTHO05D000119 4.3e-13 78.2 99 33.3
HanXRQChr10g0312631 Helianthus annuus HOM05D000256 ORTHO05D000119 7.3e-13 77.4 84 44.0
unitig_899.g15051 Utricularia gibba HOM05D000256 ORTHO05D000119 2.1e-12 75.9 104 35.6
CAN.G194.31 Capsicum annuum HOM05D000256 ORTHO05D000119 2.8e-12 75.5 100 38.0
CAN.G2051.1 Capsicum annuum HOM05D000256 ORTHO05D000119 2.8e-12 75.5 100 38.0
RhsimUnG0181400 Rhododendron simsii HOM05D000256 ORTHO05D000119 2.8e-12 75.5 90 38.9
HanXRQChr05g0155421 Helianthus annuus HOM05D000256 ORTHO05D000119 3.6e-12 75.1 85 43.5
CAN.G194.35 Capsicum annuum HOM05D000256 ORTHO05D000119 4.7e-12 74.7 103 36.9
Migut.F01939 Erythranthe guttata HOM05D000256 ORTHO05D000119 4.7e-12 74.7 79 41.8
Solyc09g091320.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 8.1e-12 73.9 103 36.9
PGSC0003DMG400035767 Solanum tuberosum HOM05D000256 ORTHO05D000119 2.3e-11 72.4 103 36.9
Migut.C00644 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.1e-11 72.0 83 41.0
Lsat_1_v5_gn_0_28001 Lactuca sativa HOM05D010440 ORTHO05D000119 3.1e-11 72.0 92 41.3
Lsat_1_v5_gn_5_86860 Lactuca sativa HOM05D010440 ORTHO05D000119 5.2e-11 71.2 84 38.1
CAN.G799.8 Capsicum annuum HOM05D000256 ORTHO05D000119 6.8e-11 70.9 100 39.0
Migut.G00652 Erythranthe guttata HOM05D000256 ORTHO05D000119 8.9e-11 70.5 90 41.1
SGA_v2.0_scaffold114G31929 Striga asiatica HOM05D000256 ORTHO05D000119 8.9e-11 70.5 97 40.2
Migut.H02432 Erythranthe guttata HOM05D005430 ORTHO05D000119 1.2e-10 70.1 79 41.8
Solyc09g091290.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 1.2e-10 70.1 100 34.0
Peaxi162Scf00047g01539 Petunia axillaris HOM05D000256 ORTHO05D000119 2.0e-10 69.3 81 42.0
Sopen09g005850 Solanum pennellii HOM05D000256 ORTHO05D000119 2.6e-10 68.9 93 36.6
CAN.G194.26 Capsicum annuum HOM05D000256 ORTHO05D000119 3.4e-10 68.6 103 35.0
Migut.J01121 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.4e-10 68.6 99 36.4
Rhsim09G0037200 Rhododendron simsii HOM05D000256 ORTHO05D000119 3.4e-10 68.6 105 32.4
PGSC0003DMG400041390 Solanum tuberosum HOM05D000256 ORTHO05D000119 4.4e-10 68.2 81 38.3
HanXRQChr02g0059391 Helianthus annuus HOM05D000256 ORTHO05D000119 5.8e-10 67.8 87 35.6
HanXRQChr10g0281411 Helianthus annuus HOM05D000256 ORTHO05D000119 5.8e-10 67.8 97 29.9
Migut.G00648 Erythranthe guttata HOM05D000256 ORTHO05D000119 7.6e-10 67.4 95 37.9
CAN.G1327.1 Capsicum annuum HOM05D000256 ORTHO05D000119 9.9e-10 67.0 102 37.3
Oeu012978.1 Olea europaea HOM05D000256 ORTHO05D000119 1.3e-09 66.6 96 35.4
Thecc.01G232200 Theobroma cacao HOM05D000256 ORTHO05D000119 1.3e-09 66.6 98 36.7
HanXRQChr06g0184631 Helianthus annuus HOM05D000256 ORTHO05D000119 2.9e-09 65.5 99 30.3
SalBow1G3303 Salvia bowleyana HOM05D000256 ORTHO05D000119 2.9e-09 65.5 81 38.3
SalBow7G2474 Salvia bowleyana HOM05D000256 ORTHO05D000119 2.9e-09 65.5 81 38.3
CAN.G194.30 Capsicum annuum HOM05D000256 ORTHO05D000119 3.8e-09 65.1 95 36.8
CAN.G250.1 Capsicum annuum HOM05D000256 ORTHO05D000119 3.8e-09 65.1 81 37.0
Oeu028457.1 Olea europaea HOM05D000256 ORTHO05D000119 3.8e-09 65.1 96 35.4
Migut.K01035 Erythranthe guttata HOM05D000256 ORTHO05D000119 4.9e-09 64.7 95 36.8
CAN.G1110.54 Capsicum annuum HOM05D000256 ORTHO05D000119 6.4e-09 64.3 100 34.0
Lsat_1_v5_gn_7_65441 Lactuca sativa HOM05D000256 ORTHO05D000119 6.4e-09 64.3 85 37.6
Oeu009572.1 Olea europaea HOM05D000256 ORTHO05D000119 6.4e-09 64.3 101 33.7
SalBow4G2587 Salvia bowleyana HOM05D000256 ORTHO05D000119 6.4e-09 64.3 92 38.0
Lsat_1_v5_gn_9_110780 Lactuca sativa HOM05D010440 ORTHO05D000119 8.4e-09 63.9 78 38.5
DCAR_002288 Daucus carota HOM05D000256 ORTHO05D000119 1.1e-08 63.5 97 32.0
Migut.I00440 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.1e-08 63.5 85 36.5
SalBow4G3261 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.1e-08 63.5 89 38.2
Migut.C00641 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.9e-08 62.8 78 38.5
Migut.F01653 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.9e-08 62.8 83 38.6
PGSC0003DMG400036675 Solanum tuberosum HOM05D000256 ORTHO05D000119 1.9e-08 62.8 101 35.6
CAN.G229.22 Capsicum annuum HOM05D000256 ORTHO05D000119 2.4e-08 62.4 81 35.8
Migut.F01940 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.4e-08 62.4 79 36.7
Migut.L00895 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.4e-08 62.4 84 34.5
Lsat_1_v5_gn_2_53301 Lactuca sativa HOM05D010440 ORTHO05D000119 2.4e-08 62.4 103 35.0
Migut.H02435 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.2e-08 62.0 79 36.7
MD17G1052600 Malus domestica HOM05D000256 ORTHO05D000119 4.1e-08 61.6 97 33.0
Oeu051793.1 Olea europaea HOM05D000256 ORTHO05D000119 4.1e-08 61.6 82 35.4
Peaxi162Scf00558g00319 Petunia axillaris HOM05D000256 ORTHO05D000119 4.1e-08 61.6 93 34.4
Sopen05g031950 Solanum pennellii HOM05D000256 ORTHO05D000119 4.1e-08 61.6 83 38.6
Oeu057965.1 Olea europaea HOM05D000256 ORTHO05D000119 5.4e-08 61.2 65 40.0
Solyc09g091330.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 5.4e-08 61.2 103 32.0
Solyc09g091340.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 5.4e-08 61.2 102 30.4
Migut.C00643 Erythranthe guttata HOM05D000256 ORTHO05D000119 7.1e-08 60.8 74 39.2
Nitab4.5_0000128g0100 Nicotiana tabacum HOM05D000256 ORTHO05D000119 7.1e-08 60.8 96 37.5
Migut.C00637 Erythranthe guttata HOM05D000256 ORTHO05D000119 9.2e-08 60.5 78 37.2
Hma1.2p1_0785F.1_g217560 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 9.2e-08 60.5 104 34.6
Hma1.2p1_1359F.1_g278050 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 9.2e-08 60.5 85 35.3
Lsat_1_v5_gn_2_53381 Lactuca sativa HOM05D010440 ORTHO05D000119 9.2e-08 60.5 97 36.1
Rhsim09G0049800 Rhododendron simsii HOM05D000256 ORTHO05D000119 9.2e-08 60.5 88 38.6
PGSC0003DMG400038118 Solanum tuberosum HOM05D000256 ORTHO05D000119 9.2e-08 60.5 100 35.0
CAN.G194.33 Capsicum annuum HOM05D000256 ORTHO05D000119 1.2e-07 60.1 80 36.2
CAN.G222.33 Capsicum annuum HOM05D000256 ORTHO05D000119 1.2e-07 60.1 88 36.4
CANSAT78G0605 Cannabis sativa HOM05D000256 ORTHO05D000119 1.6e-07 59.7 80 35.0
CAN.G674.26 Capsicum annuum HOM05D000256 ORTHO05D000119 1.6e-07 59.7 102 34.3
Migut.F01971 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.1e-07 59.3 88 31.8
Migut.H02332 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.1e-07 59.3 84 32.1
Rhsim02G0049600 Rhododendron simsii HOM05D000256 ORTHO05D000119 2.1e-07 59.3 95 36.8
SGA_v2.0_scaffold91G28096 Striga asiatica HOM05D019630 ORTHO05D000119 2.1e-07 59.3 88 31.8
Migut.F01975 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.7e-07 58.9 96 29.2
Potri.018G148366 Populus trichocarpa HOM05D000256 ORTHO05D000119 2.7e-07 58.9 93 31.2
Sopen09g034270 Solanum pennellii HOM05D000256 ORTHO05D000119 2.7e-07 58.9 102 31.4
Migut.F01731 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.5e-07 58.5 100 30.0
RcHm_v2.0_Chr4g0396541 Rosa chinensis HOM05D000256 ORTHO05D000119 3.5e-07 58.5 82 39.0
Sopen05g019280 Solanum pennellii HOM05D000256 ORTHO05D000119 3.5e-07 58.5 84 34.5
SGA_v2.0_scaffold2G01339 Striga asiatica HOM05D000256 ORTHO05D000119 3.5e-07 58.5 96 34.4
ECA234G4325 Erigeron canadensis HOM05D020961 ORTHO05D025294 4.6e-07 58.2 88 29.5
SGA_v2.0_scaffold13G06528 Striga asiatica HOM05D000256 ORTHO05D000119 4.6e-07 58.2 93 33.3
Migut.F01937 Erythranthe guttata HOM05D000256 ORTHO05D000119 6.0e-07 57.8 93 34.4
Sopen09g035010 Solanum pennellii HOM05D000256 ORTHO05D000119 6.0e-07 57.8 81 38.3
SalBow1G1412 Salvia bowleyana HOM05D000256 ORTHO05D000119 7.8e-07 57.4 79 36.7
SalBow1G6082 Salvia bowleyana HOM05D000256 ORTHO05D000119 7.8e-07 57.4 79 36.7
SGA_v2.0_scaffold62G21375 Striga asiatica HOM05D000256 ORTHO05D000119 7.8e-07 57.4 93 34.4
Migut.F01976 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.0e-06 57.0 96 28.1
Migut.N00384 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.0e-06 57.0 85 34.1
Hma1.2p1_2329F.1_g320010 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 1.0e-06 57.0 101 30.7
Solyc05g053465.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 1.0e-06 57.0 81 30.9
Solyc09g011100.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 1.0e-06 57.0 91 31.9
Rhsim09G0045600 Rhododendron simsii HOM05D005430 ORTHO05D026106 1.3e-06 56.6 92 31.5
SalBow2G0067 Salvia bowleyana HOM05D005430 ORTHO05D000119 1.3e-06 56.6 95 35.8
CiPaw.04G107900 Carya illinoinensis HOM05D000256 ORTHO05D000119 1.7e-06 56.2 81 35.8
Peaxi162Scf00047g01546 Petunia axillaris HOM05D038614 ORTHO05D000119 1.7e-06 56.2 97 36.1
Aqoxy3G02151 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 2.3e-06 55.8 98 35.7
AT1G04645 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 2.3e-06 55.8 80 35.0
CAN.G305.12 Capsicum annuum HOM05D000256 ORTHO05D000119 2.3e-06 55.8 81 34.6
Migut.G01271 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.3e-06 55.8 78 37.2
Oeu062945.1 Olea europaea HOM05D000256 ORTHO05D000119 2.3e-06 55.8 97 34.0
SGA_v2.0_scaffold2G01373 Striga asiatica HOM05D000256 ORTHO05D000119 2.3e-06 55.8 87 34.5
RcHm_v2.0_Chr4g0396551 Rosa chinensis HOM05D005430 ORTHO05D000119 3.9e-06 55.1 82 34.1
PGSC0003DMG400044097 Solanum tuberosum HOM05D000256 ORTHO05D000119 3.9e-06 55.1 101 30.7
Migut.G01208 Erythranthe guttata HOM05D000256 ORTHO05D000119 5.1e-06 54.7 76 34.2
Hma1.2p1_0170F.1_g075380 Hydrangea macrophylla HOM05D005430 ORTHO05D000119 5.1e-06 54.7 97 35.1
PGSC0003DMG400044708 Solanum tuberosum HOM05D000256 ORTHO05D000119 5.1e-06 54.7 102 29.4
Eucgr.H01885 Eucalyptus grandis HOM05D000256 ORTHO05D000119 6.6e-06 54.3 101 27.7
SalBow1G3274 Salvia bowleyana HOM05D000256 ORTHO05D000119 6.6e-06 54.3 93 29.0
COL.COLO4_11200 Corchorus olitorius HOM05D000256 ORTHO05D000119 8.6e-06 53.9 104 28.8
Migut.K01027 Erythranthe guttata HOM05D000256 ORTHO05D000119 8.6e-06 53.9 95 27.4
Gohir.A08G046400 Gossypium hirsutum HOM05D000256 ORTHO05D000119 8.6e-06 53.9 100 33.0
Medtr1g028420 Medicago truncatula HOM05D000256 ORTHO05D000119 8.6e-06 53.9 83 33.7
SalBow4G1538 Salvia bowleyana HOM05D000256 ORTHO05D000119 8.6e-06 53.9 92 33.7
SalBow4G3236 Salvia bowleyana HOM05D000256 ORTHO05D000119 8.6e-06 53.9 92 33.7
Thecc.01G232100 Theobroma cacao HOM05D000256 ORTHO05D000119 8.6e-06 53.9 93 32.3


User provided reference genes

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