Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 1.6e-212 742.7 426 100.0
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 6.2e-87 325.5 361 62.9
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 1.1e-80 304.7 227 76.2
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 3.0e-57 226.9 251 53.8
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 1.5e-56 224.6 237 56.5
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 1.3e-52 211.5 247 53.8
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 4.2e-51 206.5 209 58.4
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 5.5e-51 206.1 272 50.0
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 2.1e-50 204.1 247 54.3
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 2.7e-50 203.8 243 53.9
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 2.7e-50 203.8 255 51.8
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 1.3e-49 201.4 243 53.1
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 1.3e-49 201.4 236 53.8
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 5.1e-49 199.5 238 52.5
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 8.7e-49 198.7 238 52.9
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.1e-48 198.4 243 53.5
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.1e-48 198.4 209 55.0
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.9e-48 197.6 246 50.0
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.5e-48 197.2 238 52.5
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.5e-48 197.2 238 52.5
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 2.5e-48 197.2 251 49.4
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 2.5e-48 197.2 230 51.7
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 3.3e-48 196.8 250 51.6
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 4.3e-48 196.4 247 51.8
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 4.3e-48 196.4 244 52.5
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 9.7e-48 195.3 244 47.1
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 1.3e-47 194.9 238 52.9
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 1.3e-47 194.9 233 51.5
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.6e-47 194.5 238 52.5
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.2e-47 194.1 238 52.1
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.2e-47 194.1 238 52.1
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 2.8e-47 193.7 238 52.5
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 3.7e-47 193.4 250 49.2
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 6.3e-47 192.6 237 47.3
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 6.3e-47 192.6 213 52.6
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.4e-46 191.4 242 48.3
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 2.4e-46 190.7 251 51.0
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 2.4e-46 190.7 239 50.6
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 9.0e-46 188.7 248 48.8
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 9.0e-46 188.7 206 53.9
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 1.2e-45 188.3 212 51.4
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 3.4e-45 186.8 247 45.7
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 3.4e-45 186.8 248 48.0
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 4.5e-45 186.4 261 44.8
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 4.5e-45 186.4 218 54.1
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 4.5e-45 186.4 214 51.9
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 2.2e-44 184.1 248 49.2
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 2.2e-44 184.1 213 53.1
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 2.9e-44 183.7 240 50.4
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 3.2e-43 180.3 257 47.9
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 4.2e-43 179.9 250 50.0
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 7.2e-43 179.1 290 43.4
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 1.2e-42 178.3 274 43.1
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 1.6e-42 177.9 239 46.0
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 1.6e-42 177.9 260 46.9
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 2.1e-42 177.6 211 52.6
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 3.6e-42 176.8 214 53.3
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 3.6e-42 176.8 214 53.3
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 4.6e-42 176.4 201 53.2
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 4.6e-42 176.4 288 45.1
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 6.1e-42 176.0 250 45.6
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 1.0e-41 175.3 248 46.4
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 1.0e-41 175.3 269 43.9
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.0e-41 175.3 223 48.9
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 2.3e-41 174.1 239 50.2
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 3.0e-41 173.7 212 52.4
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 3.0e-41 173.7 217 52.1
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 3.9e-41 173.3 211 49.3
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 5.1e-41 172.9 215 51.6
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 8.8e-41 172.2 281 43.1
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 1.5e-40 171.4 263 45.6
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 2.0e-40 171.0 253 46.2
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 3.3e-40 170.2 210 51.4
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 3.3e-40 170.2 289 40.8
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 3.3e-40 170.2 195 55.4
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 4.3e-40 169.9 251 47.4
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 5.7e-40 169.5 271 43.9
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 2.8e-39 167.2 209 50.7
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 8.2e-39 165.6 238 46.2
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 8.2e-39 165.6 220 46.8
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 3.1e-38 163.7 179 53.6
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 9.1e-38 162.2 236 44.1
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 4.5e-37 159.8 135 60.0
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 7.7e-37 159.1 228 46.9
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 7.7e-37 159.1 134 60.4
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 2.2e-36 157.5 203 47.8
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 2.9e-36 157.1 294 37.1
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 5.0e-36 156.4 203 47.3
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 1.1e-35 155.2 198 48.0
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 4.2e-35 153.3 241 44.0
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 5.5e-35 152.9 123 61.8
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 9.4e-35 152.1 176 54.0
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 7.4e-32 142.5 273 37.7
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 2.4e-30 137.5 260 41.9
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 4.5e-29 133.3 219 38.8
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 1.0e-28 132.1 204 43.6
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 5.0e-28 129.8 144 49.3
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 1.2e-26 125.2 106 62.3
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 1.2e-26 125.2 176 46.0
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 5.2e-25 119.8 215 40.0
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 6.3e-23 112.8 166 42.8
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 7.0e-22 109.4 266 35.0
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 1.0e-20 105.5 104 52.9
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 1.0e-20 105.5 221 37.6
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 2.1e-18 97.8 198 37.9
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 8.8e-17 92.4 244 32.0
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 1.4e-14 85.1 117 48.7
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 2.4e-14 84.3 180 38.9
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 2.9e-12 77.4 74 55.4
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 6.5e-12 76.3 126 38.9
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 8.5e-12 75.9 50 70.0
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 1.6e-10 71.6 122 44.3
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 6.1e-10 69.7 130 38.5
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 8.0e-10 69.3 122 43.4
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 2.3e-09 67.8 154 40.3
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 5.2e-09 66.6 127 41.7
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 8.8e-09 65.9 40 77.5
Lsat_1_v5_gn_5_54781 Lactuca sativa HOM05D000375 ORTHO05D000240 1.5e-08 65.1 44 77.3
HanXRQChr01g0016831 Helianthus annuus HOM05D001622 ORTHO05D048278 2.8e-07 60.8 50 72.0
HanXRQChr15g0486411 Helianthus annuus HOM05D001622 ORTHO05D048278 2.8e-07 60.8 54 66.7
Sabra19G0056100 Salix brachista HOM05D006369 ORTHO05D007764 3.7e-07 60.5 91 42.9


User provided reference genes

Program Settings