Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0541461 Helianthus annuus HOM05D000002 ORTHO05D000001 2.7e-121 438.7 233 100.0
HanXRQChr01g0008001 Helianthus annuus HOM05D000002 ORTHO05D000001 6.5e-30 135.2 135 56.3
HanXRQChr07g0202651 Helianthus annuus HOM05D000002 ORTHO05D000001 3.2e-29 132.9 135 54.8
HanXRQChr11g0320201 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-28 130.2 135 52.6
HanXRQChr10g0315391 Helianthus annuus HOM05D000002 ORTHO05D000001 1.0e-27 127.9 135 52.6
HanXRQChr09g0251421 Helianthus annuus HOM05D000530 ORTHO05D003341 1.3e-22 110.9 140 47.1
HanXRQChr16g0523581 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-21 107.8 133 42.9
HanXRQChr11g0320841 Helianthus annuus HOM05D000002 ORTHO05D000001 1.9e-21 107.1 140 43.6
HanXRQChr17g0568341 Helianthus annuus HOM05D000002 ORTHO05D000001 1.6e-20 104.0 132 45.5
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 2.7e-20 103.2 146 45.2
ECA232G3680 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-19 101.3 132 41.7
HanXRQChr15g0491201 Helianthus annuus HOM05D000002 ORTHO05D000001 1.0e-19 101.3 134 44.0
HanXRQChr02g0040961 Helianthus annuus HOM05D000002 ORTHO05D000001 1.8e-19 100.5 131 40.5
HanXRQChr03g0064201 Helianthus annuus HOM05D000002 ORTHO05D000001 1.8e-19 100.5 133 44.4
HanXRQChr17g0570071 Helianthus annuus HOM05D000002 ORTHO05D000001 3.0e-19 99.8 133 41.4
ECA246G2563 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.8e-19 98.2 127 44.1
HanXRQChr17g0566031 Helianthus annuus HOM05D000002 ORTHO05D000001 2.0e-18 97.1 140 43.6
HanXRQChr07g0187191 Helianthus annuus HOM05D000002 ORTHO05D000001 5.7e-18 95.5 133 41.4
HanXRQChr14g0457051 Helianthus annuus HOM05D000002 ORTHO05D000001 9.7e-18 94.7 116 43.1
HanXRQChr09g0254161 Helianthus annuus HOM05D000002 ORTHO05D000001 4.8e-17 92.4 121 37.2
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 3.1e-16 89.7 126 44.4
Oeu059914.1 Olea europaea HOM05D000002 ORTHO05D000001 3.1e-16 89.7 117 47.0
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 4.1e-16 89.4 136 41.9
QL02p077346 Quercus lobata HOM05D000002 ORTHO05D000001 4.1e-16 89.4 138 42.8
Oeu018031.1 Olea europaea HOM05D000002 ORTHO05D000001 5.3e-16 89.0 97 52.6
Oeu005617.1 Olea europaea HOM05D000002 ORTHO05D000001 5.9e-15 85.5 117 46.2
ECA247G0128 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-15 85.1 98 50.0
ECA247G3681 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-15 85.1 98 50.0
HanXRQChr02g0036371 Helianthus annuus HOM05D000002 ORTHO05D000001 7.7e-15 85.1 82 52.4
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 7.7e-15 85.1 120 44.2
ECA233G0266 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-14 84.7 98 45.9
ECA240G0774 Erigeron canadensis HOM05D000004 ORTHO05D000001 1.3e-14 84.3 98 49.0
ECA236G1418 Erigeron canadensis HOM05D000669 ORTHO05D000679 2.9e-14 83.2 166 34.9
Oeu021500.1 Olea europaea HOM05D000002 ORTHO05D000001 5.0e-14 82.4 116 42.2
HanXRQChr00c0303g0573321 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-13 81.3 97 45.4
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 1.5e-13 80.9 116 43.1
VMungo0251G0530 Vigna mungo HOM05D000002 ORTHO05D037837 1.5e-13 80.9 89 47.2
Oeu039050.1 Olea europaea HOM05D000002 ORTHO05D000001 3.2e-13 79.7 120 43.3
Oeu003487.1 Olea europaea HOM05D000002 ORTHO05D000001 5.5e-13 79.0 117 40.2
Oeu058588.1 Olea europaea HOM05D000002 ORTHO05D000001 7.2e-13 78.6 101 46.5
HanXRQChr14g0429151 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-12 77.8 97 46.4
Oeu062632.1 Olea europaea HOM05D000002 ORTHO05D000001 2.1e-12 77.0 141 35.5
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-12 75.5 116 38.8
HanXRQChr05g0138601 Helianthus annuus HOM05D000002 ORTHO05D000001 2.3e-11 73.6 100 39.0
ECA240G3677 Erigeron canadensis HOM05D000031 ORTHO05D000030 3.0e-11 73.2 88 47.7
ECA246G1142 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-11 72.4 73 53.4
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 8.8e-11 71.6 122 33.6
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 1.2e-10 71.2 153 33.3
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 2.0e-10 70.5 121 34.7
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.4e-10 69.3 78 44.9
Atru.chr4.967 Acer truncatum HOM05D000002 ORTHO05D000001 5.7e-10 68.9 84 42.9
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 5.7e-10 68.9 121 34.7
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 5.7e-10 68.9 102 33.3
Sed0010177 Sechium edule HOM05D000002 ORTHO05D000001 5.7e-10 68.9 88 36.4
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.5e-10 68.6 149 35.6
Sabra02G0139200 Salix brachista HOM05D000002 ORTHO05D000001 1.7e-09 67.4 145 34.5
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.2e-09 67.0 143 34.3
Potri.016G087601 Populus trichocarpa HOM05D000002 ORTHO05D000001 3.7e-09 66.2 107 34.6
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.7e-09 66.2 144 31.2
Sed0021481 Sechium edule HOM05D000002 ORTHO05D000001 8.2e-09 65.1 124 29.8
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-08 64.7 142 33.1
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.1e-08 64.7 176 34.1
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 1.1e-08 64.7 133 30.8
Sabra11G0010600 Salix brachista HOM05D000002 ORTHO05D000001 1.1e-08 64.7 120 36.7
Atru.chr2.2995 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-08 63.9 126 31.0
CSS0025416 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-08 63.9 141 33.3
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-08 63.5 141 30.5
Oeu032551.1 Olea europaea HOM05D000002 ORTHO05D000001 2.4e-08 63.5 124 35.5
ECA238G2413 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-08 63.2 90 37.8
Lju225C4G4 Lonicera japonica HOM05D000002 ORTHO05D000001 3.1e-08 63.2 111 34.2
RcHm_v2.0_Chr7g0203981 Rosa chinensis HOM05D000002 ORTHO05D000001 3.1e-08 63.2 110 31.8
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-08 62.8 141 30.5
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.1e-08 62.8 127 33.1
Hma1.2p1_0840F.1_g226720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.3e-08 62.4 131 32.8
Hma1.2p1_1768F.1_g301510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.3e-08 62.4 131 32.8
Hma1.2p1_3787F.1_g337595 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.3e-08 62.4 131 32.8
Hma1.2p1_3787F.1_g337600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.3e-08 62.4 131 32.8
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 5.3e-08 62.4 98 35.7
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-08 62.0 128 32.8
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 7.0e-08 62.0 158 30.4
CSS0045870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-08 61.6 103 35.0
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.1e-08 61.6 128 30.5
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.1e-08 61.6 145 28.3
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 9.1e-08 61.6 114 29.8
C09p34990 Brassica napus HOM05D000002 ORTHO05D000001 1.2e-07 61.2 140 32.9
PSO040G0055 Papaver somniferum HOM05D000973 ORTHO05D000001 1.2e-07 61.2 102 32.4
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-07 61.2 138 30.4
ECA234G3518 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-07 60.8 78 44.9
Hma1.2p1_2159F.1_g315520 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-07 60.8 138 30.4
PSO423G0202 Papaver somniferum HOM05D000973 ORTHO05D000001 1.6e-07 60.8 102 32.4
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 2.0e-07 60.5 121 37.2
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 2.0e-07 60.5 138 33.3
TAR696G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.0e-07 60.5 99 35.4
Hma1.2p1_2469F.1_g322690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.7e-07 60.1 168 30.4
Prupe.4G199600 Prunus persica HOM05D000002 ORTHO05D000001 2.7e-07 60.1 85 36.5
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 3.5e-07 59.7 134 28.4
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 3.5e-07 59.7 141 27.7
Hma1.2p1_0158F.1_g069590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-07 59.7 168 30.4
Hma1.2p1_2372F.1_g320810 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-07 59.7 147 28.6
Hma1.2p1_2923F.1_g330370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-07 59.7 147 28.6
Hma1.2p1_3198F.1_g333876 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-07 59.7 147 28.6
RcHm_v2.0_Chr7g0200091 Rosa chinensis HOM05D000002 ORTHO05D000001 3.5e-07 59.7 126 28.6
Sed0012354 Sechium edule HOM05D007933 ORTHO05D000001 3.5e-07 59.7 141 32.6
TAR607G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.5e-07 59.7 71 42.3
TAR720G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.5e-07 59.7 105 32.4
CSS0007683 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-07 59.3 75 40.0
FvH4_7g19191 Fragaria vesca HOM05D000002 ORTHO05D000001 4.5e-07 59.3 76 40.8
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 4.5e-07 59.3 96 34.4
PSO339G0642 Papaver somniferum HOM05D000002 ORTHO05D000001 4.5e-07 59.3 135 30.4
Atru.chr7.1131 Acer truncatum HOM05D000002 ORTHO05D000001 5.9e-07 58.9 144 31.2
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 5.9e-07 58.9 139 28.1
Dinv08503 Davidia involucrata HOM05D000002 ORTHO05D000001 5.9e-07 58.9 129 28.7
TAR492G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.9e-07 58.9 136 30.1
CSS0001687 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-07 58.5 77 40.3
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-07 58.5 141 29.1
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.7e-07 58.5 127 32.3
Hma1.2p1_0786F.1_g217740 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.7e-07 58.5 118 34.7
Hma1.2p1_1446F.1_g283970 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.7e-07 58.5 114 33.3
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 7.7e-07 58.5 140 31.4
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 7.7e-07 58.5 130 29.2
CSS0034941 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-06 58.2 103 34.0
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 1.3e-06 57.8 117 32.5
Atru.chr3.1003 Acer truncatum HOM05D000002 ORTHO05D000001 1.7e-06 57.4 162 27.2
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 57.4 91 39.6
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-06 57.4 120 31.7
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-06 57.4 137 32.1
PSO339G3884 Papaver somniferum HOM05D000002 ORTHO05D000001 1.7e-06 57.4 171 30.4
Prupe.2G201300 Prunus persica HOM05D000010 ORTHO05D000001 1.7e-06 57.4 88 38.6
Sabra01G0140600 Salix brachista HOM05D000002 ORTHO05D000001 1.7e-06 57.4 124 33.1
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 2.2e-06 57.0 137 27.0
Prupe.2G201200 Prunus persica HOM05D000010 ORTHO05D000001 2.2e-06 57.0 86 37.2
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 2.2e-06 57.0 131 30.5
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 2.2e-06 57.0 123 35.0
CSS0005755 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-06 56.6 102 34.3
FvH4_6g11492 Fragaria vesca HOM05D000002 ORTHO05D000001 3.8e-06 56.2 76 39.5
SHI14897 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-06 56.2 106 34.9
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-06 55.8 141 28.4
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 5.0e-06 55.8 99 32.3
FvH4_5g20701 Fragaria vesca HOM05D050343 ORTHO05D000001 5.0e-06 55.8 107 28.0
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 5.0e-06 55.8 140 32.9
Prupe.1G170400 Prunus persica HOM05D000002 ORTHO05D000001 5.0e-06 55.8 145 30.3
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.5e-06 55.5 122 27.9
Dinv09595 Davidia involucrata HOM05D000097 ORTHO05D000041 6.5e-06 55.5 116 31.0
Gorai.008G092500 Gossypium raimondii HOM05D000002 ORTHO05D000001 6.5e-06 55.5 140 30.0
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 6.5e-06 55.5 135 31.9
Nitab4.5_0003104g0060 Nicotiana tabacum HOM05D000097 ORTHO05D000041 6.5e-06 55.5 82 39.0
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-06 55.1 133 27.8
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-06 55.1 140 29.3
FvH4_5g20624 Fragaria vesca HOM05D000002 ORTHO05D000001 8.5e-06 55.1 106 31.1
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.5e-06 55.1 128 28.1
MD02G1303700 Malus domestica HOM05D000002 ORTHO05D000001 8.5e-06 55.1 141 30.5
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 8.5e-06 55.1 104 35.6
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.5e-06 55.1 86 36.0


User provided reference genes

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