Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 4.6e-111 405.6 418 100.0
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 1.4e-83 314.3 398 92.5
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 2.9e-81 306.6 404 91.6
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 2.0e-74 283.9 410 74.6
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 8.5e-73 278.5 402 70.1
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 1.1e-72 278.1 403 73.9
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 1.1e-72 278.1 403 73.9
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 1.7e-68 264.2 403 69.2
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 1.7e-68 264.2 403 69.2
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 2.8e-68 263.5 403 68.0
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 4.8e-68 262.7 406 77.8
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 1.4e-67 261.2 406 77.6
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 2.4e-67 260.4 403 69.0
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 3.1e-67 260.0 401 69.6
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 4.1e-67 259.6 404 70.8
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 7.0e-67 258.8 408 72.1
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 9.1e-67 258.5 417 70.7
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 7.7e-66 255.4 404 68.6
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 1.0e-65 255.0 394 84.5
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 1.3e-65 254.6 404 73.5
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 1.7e-65 254.2 403 72.2
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 3.8e-65 253.1 404 72.3
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 5.0e-65 252.7 402 72.9
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 1.5e-64 251.1 402 73.1
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 2.5e-64 250.4 405 76.3
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 5.5e-64 249.2 404 73.0
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 8.0e-63 245.4 406 76.6
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 1.8e-62 244.2 411 72.0
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 2.3e-62 243.8 404 66.1
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 2.3e-62 243.8 412 69.2
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 2.3e-62 243.8 404 67.1
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 4.0e-62 243.0 403 72.0
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 8.8e-62 241.9 402 70.6
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 1.5e-61 241.1 404 70.3
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 2.0e-61 240.7 403 65.5
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 3.7e-60 236.5 405 62.5
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 6.3e-60 235.7 404 68.3
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 8.3e-60 235.3 398 67.6
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 1.4e-59 234.6 400 69.0
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 1.8e-59 234.2 404 70.5
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 2.4e-59 233.8 402 66.2
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 3.1e-59 233.4 404 67.8
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 3.1e-59 233.4 401 68.3
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 3.1e-59 233.4 399 69.9
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 5.4e-59 232.6 404 66.8
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 5.4e-59 232.6 404 71.0
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 5.4e-59 232.6 406 67.5
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 1.2e-58 231.5 402 65.9
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 1.2e-58 231.5 405 80.5
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 1.6e-58 231.1 404 71.0
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 1.6e-58 231.1 417 65.5
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 4.5e-58 229.6 403 69.5
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 5.9e-58 229.2 403 68.5
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 7.7e-58 228.8 424 64.6
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 1.3e-57 228.0 401 79.6
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 2.3e-57 227.3 403 69.0
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 2.3e-57 227.3 464 53.0
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 3.8e-57 226.5 402 67.9
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 1.5e-56 224.6 404 67.1
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 1.5e-56 224.6 398 69.1
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 3.3e-56 223.4 404 63.6
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 3.6e-55 219.9 404 72.5
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 6.1e-55 219.2 404 70.8
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 1.8e-54 217.6 406 67.5
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 8.9e-54 215.3 403 64.5
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 2.0e-53 214.2 404 65.6
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 3.4e-53 213.4 403 63.3
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 5.7e-53 212.6 403 69.2
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 5.7e-53 212.6 403 67.7
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 9.8e-53 211.8 404 67.6
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 1.3e-52 211.5 404 68.8
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 2.2e-52 210.7 404 65.3
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 2.8e-52 210.3 404 69.1
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 2.8e-52 210.3 404 68.8
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 2.8e-52 210.3 403 67.7
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 4.9e-52 209.5 401 62.6
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 6.3e-52 209.1 409 62.6
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 1.8e-51 207.6 415 63.9
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 2.4e-51 207.2 404 65.1
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 2.0e-50 204.1 406 63.5
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 3.5e-50 203.4 404 63.6
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 7.8e-50 202.2 403 65.3
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 1.7e-49 201.1 391 64.7
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 2.9e-49 200.3 404 63.9
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 3.8e-49 199.9 405 63.7
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 5.0e-49 199.5 443 49.4
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 1.8e-46 191.0 450 56.9
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 2.3e-46 190.7 403 69.5
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 3.0e-46 190.3 405 69.4
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 8.9e-46 188.7 404 58.2
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 3.7e-44 183.3 404 55.7
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 5.4e-43 179.5 405 75.1
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 3.5e-42 176.8 533 45.0
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 2.8e-39 167.2 403 73.0
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 1.4e-38 164.9 403 64.0
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 1.8e-38 164.5 412 55.3
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 2.3e-38 164.1 410 62.2
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 2.2e-36 157.5 419 50.6
arahy.Tifrunner.gnm1.ann1.6XP1A8 Arachis hypogaea HOM05D006667 ORTHO05D008387 1.0e-33 148.7 106 67.9
arahy.Tifrunner.gnm1.ann1.RI7T4X Arachis hypogaea HOM05D006667 ORTHO05D008387 1.0e-33 148.7 106 67.9
arahy.Tifrunner.gnm1.ann1.ALJ85P Arachis hypogaea HOM05D006667 ORTHO05D008387 3.6e-31 140.2 98 70.4
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 6.2e-31 139.4 111 60.4
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 8.1e-31 139.0 183 65.6
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 3.4e-29 133.7 106 61.3
arahy.Tifrunner.gnm1.ann1.L6WSTP Arachis hypogaea HOM05D006667 ORTHO05D008387 2.9e-28 130.6 90 71.1
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 3.7e-28 130.2 398 38.9
HPP92_025485 Vanilla planifolia HOM05D006667 ORTHO05D008387 1.6e-26 124.8 119 55.5
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 1.7e-25 121.3 104 57.7
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 2.0e-21 107.8 180 49.4
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 4.4e-21 106.7 177 44.6
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 3.9e-17 93.6 67 71.6
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 1.5e-16 91.7 179 43.6
Medtr7g010500 Medicago truncatula HOM05D006667 ORTHO05D008387 1.8e-06 58.2 46 58.7
C06p28130 Brassica napus HOM05D006667 ORTHO05D008387 6.9e-06 56.2 33 75.8


User provided reference genes

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