Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 2.4e-127 458.8 219 100.0
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 9.2e-95 350.5 202 82.7
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 2.1e-94 349.4 202 83.7
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 6.3e-59 231.5 189 59.3
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 5.3e-58 228.4 191 58.1
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 4.5e-57 225.3 155 69.0
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 7.6e-57 224.6 172 61.6
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.0e-56 224.2 155 68.4
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 1.3e-56 223.8 187 59.9
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 5.0e-56 221.9 203 53.2
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 5.0e-56 221.9 197 56.9
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 6.5e-56 221.5 197 56.9
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 1.9e-55 219.9 176 60.8
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 1.9e-55 219.9 167 62.9
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 1.9e-55 219.9 189 58.7
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.6e-54 216.9 203 53.7
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 1.6e-54 216.9 187 59.9
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 2.7e-54 216.1 171 59.6
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 3.6e-54 215.7 195 55.9
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 6.1e-54 214.9 179 59.8
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 2.3e-53 213.0 155 64.5
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 5.1e-53 211.8 170 58.8
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.5e-52 209.5 191 54.5
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 9.7e-52 207.6 171 57.9
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 9.7e-52 207.6 150 64.7
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 1.3e-51 207.2 166 59.0
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 1.3e-51 207.2 165 60.0
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 4.8e-51 205.3 212 50.5
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 1.4e-50 203.8 182 57.7
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 1.8e-50 203.4 154 62.3
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 1.8e-50 203.4 191 50.8
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 2.4e-50 203.0 163 57.7
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 2.4e-50 203.0 193 52.3
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 3.1e-50 202.6 150 62.0
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 3.1e-50 202.6 150 62.0
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 3.1e-50 202.6 153 60.1
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 3.1e-50 202.6 182 55.5
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 5.3e-50 201.8 150 62.0
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 5.3e-50 201.8 150 62.0
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 6.9e-50 201.4 153 62.7
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 6.9e-50 201.4 153 60.8
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 1.2e-49 200.7 184 53.8
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 1.5e-49 200.3 153 62.7
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 1.5e-49 200.3 184 52.2
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 2.0e-49 199.9 197 54.3
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 3.4e-49 199.1 187 50.3
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 1.4e-47 193.7 178 54.5
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 1.6e-46 190.3 206 52.9
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 6.1e-46 188.3 188 50.5
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 6.1e-46 188.3 192 50.5
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 1.0e-45 187.6 193 50.8
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 1.4e-45 187.2 150 60.0
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 1.8e-45 186.8 184 50.5
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 3.9e-45 185.7 230 43.9
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 5.1e-45 185.3 155 57.4
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 2.0e-44 183.3 186 50.0
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 3.3e-44 182.6 157 55.4
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 4.4e-44 182.2 177 52.0
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 4.4e-44 182.2 203 48.8
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 9.7e-44 181.0 191 49.2
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 2.2e-43 179.9 184 49.5
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 3.4e-41 172.6 172 51.2
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 1.3e-40 170.6 179 49.2
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 3.8e-40 169.1 150 57.3
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 4.2e-39 165.6 111 64.0
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 3.6e-38 162.5 188 47.9
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 2.3e-37 159.8 154 51.9
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 8.8e-37 157.9 151 50.3
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 2.0e-36 156.8 116 62.9
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 2.6e-36 156.4 148 52.7
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 3.3e-36 156.0 170 50.0
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 2.8e-35 152.9 111 64.9
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 3.7e-35 152.5 147 46.3
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 1.1e-34 151.0 109 62.4
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 1.4e-34 150.6 185 47.6
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 4.1e-34 149.1 219 38.8
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 9.1e-34 147.9 147 50.3
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 1.2e-33 147.5 106 64.2
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 8.5e-32 141.4 185 44.9
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 1.5e-31 140.6 138 52.9
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 7.2e-31 138.3 109 58.7
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.2e-30 137.5 125 52.0
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 1.4e-29 134.0 100 62.0
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 2.0e-25 120.2 114 52.6
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 1.1e-23 114.4 94 54.3
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 7.2e-23 111.7 77 62.3
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 2.3e-21 106.7 86 54.7
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 6.8e-21 105.1 75 68.0
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 4.4e-20 102.4 115 45.2
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 4.4e-20 102.4 108 46.3
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 1.6e-14 84.0 172 29.1
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 3.6e-14 82.8 212 28.3
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 4.9e-11 72.4 99 39.4
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 1.7e-08 63.9 82 36.6
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.9e-07 60.5 105 35.2
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 6.1e-06 55.5 32 78.1


User provided reference genes

Program Settings