Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0539051 Helianthus annuus HOM05D007340 ORTHO05D008979 5.7e-128 462.2 570 100.0
HanXRQChr10g0314401 Helianthus annuus HOM05D007340 ORTHO05D008979 3.8e-92 343.2 568 89.6
Lsat_1_v5_gn_5_93381 Lactuca sativa HOM05D007340 ORTHO05D008979 5.6e-75 286.2 201 68.7
Dinv44465 Davidia involucrata HOM05D007340 ORTHO05D008979 7.6e-48 196.1 211 46.9
CSS0042730 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.4e-46 191.8 207 46.9
Lj4P768T34 Lonicera japonica HOM05D007340 ORTHO05D008979 6.6e-44 183.0 202 45.0
vmacro17996 Vaccinium macrocarpon HOM05D007340 ORTHO05D008979 8.7e-44 182.6 209 45.0
Cfa015550 Carpinus fangiana HOM05D007340 ORTHO05D008979 9.6e-43 179.1 215 43.3
Cc03_g02890 Coffea canephora HOM05D007340 ORTHO05D008979 9.6e-43 179.1 220 40.5
Haze_00999 Corylus avellana HOM05D007340 ORTHO05D008979 1.6e-42 178.3 215 43.3
GSVIVG01017865001 Vitis vinifera HOM05D007340 ORTHO05D008979 8.1e-42 176.0 205 44.4
Atru.chr4.2678 Acer truncatum HOM05D007340 ORTHO05D008979 1.8e-41 174.9 204 43.1
Atru.chr4.2685 Acer truncatum HOM05D007340 ORTHO05D008979 1.8e-41 174.9 204 43.1
CiPaw.01G157600 Carya illinoinensis HOM05D007340 ORTHO05D008979 1.8e-41 174.9 215 41.4
Prupe.3G113000 Prunus persica HOM05D007340 ORTHO05D008979 1.8e-41 174.9 197 44.7
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 1.8e-41 174.9 209 43.1
Hma1.2p1_0511F.1_g169170 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 9.0e-41 172.6 161 45.3
Hma1.2p1_2025F.1_g311460 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 1.2e-40 172.2 161 45.3
Manes.03G186900 Manihot esculenta HOM05D007340 ORTHO05D008979 1.2e-40 172.2 215 38.6
Lalb_Chr15g0087231 Lupinus albus HOM05D007340 ORTHO05D008979 1.7e-39 168.3 191 44.5
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 2.2e-39 167.9 123 60.2
COL.COLO4_13983 Corchorus olitorius HOM05D007340 ORTHO05D008979 4.9e-39 166.8 218 40.4
Gorai.006G074200 Gossypium raimondii HOM05D001150 ORTHO05D008979 6.4e-39 166.4 213 38.5
Oeu021055.1 Olea europaea HOM05D007340 ORTHO05D008979 6.4e-39 166.4 209 43.1
MD02G1277500 Malus domestica HOM05D007340 ORTHO05D008979 8.4e-39 166.0 197 43.7
FvH4_4g14110 Fragaria vesca HOM05D007340 ORTHO05D008979 1.1e-38 165.6 198 42.4
Ciclev10007051m.g Citrus clementina HOM05D007340 ORTHO05D008979 1.9e-38 164.9 155 45.8
Ca_06378_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 3.2e-38 164.1 155 48.4
Duzib151G0496 Durio zibethinus HOM05D007340 ORTHO05D008979 7.1e-38 162.9 218 36.7
FAN12G4271 Fragaria x ananassa HOM05D007340 ORTHO05D008979 7.1e-38 162.9 198 41.9
Gohir.D09G059500 Gossypium hirsutum HOM05D001150 ORTHO05D008979 7.1e-38 162.9 180 42.2
QL06p005970 Quercus lobata HOM05D007340 ORTHO05D008979 7.1e-38 162.9 210 39.5
RcHm_v2.0_Chr4g0419121 Rosa chinensis HOM05D007340 ORTHO05D008979 2.1e-37 161.4 200 43.0
TAR633G1855 Trochodendron aralioides HOM05D007340 ORTHO05D008979 2.7e-37 161.0 208 38.9
arahy.Tifrunner.gnm1.ann1.PE1C4R Arachis hypogaea HOM05D007340 ORTHO05D008979 3.5e-37 160.6 164 46.3
PGSC0003DMG400004352 Solanum tuberosum HOM05D007340 ORTHO05D008979 3.5e-37 160.6 218 39.4
CAN.G522.11 Capsicum annuum HOM05D007340 ORTHO05D008979 4.6e-37 160.2 218 39.0
Gohir.A09G060400 Gossypium hirsutum HOM05D001150 ORTHO05D008979 1.0e-36 159.1 163 42.9
Solyc01g080310.4 Solanum lycopersicum HOM05D007340 ORTHO05D008979 1.8e-36 158.3 164 44.5
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 3.9e-36 157.1 165 43.0
TWI73G0639 Tripterygium wilfordii HOM05D007340 ORTHO05D008979 3.9e-36 157.1 209 35.9
Sopen01g032100 Solanum pennellii HOM05D007340 ORTHO05D008979 5.1e-36 156.8 218 39.0
TPR.G28181 Trifolium pratense HOM05D007340 ORTHO05D008979 5.1e-36 156.8 189 41.3
ClCG05G001120 Citrullus lanatus HOM05D007340 ORTHO05D008979 1.9e-35 154.8 201 38.3
Medtr5g094770 Medicago truncatula HOM05D007340 ORTHO05D008979 4.3e-35 153.7 189 40.7
Nitab4.5_0003070g0020 Nicotiana tabacum HOM05D007340 ORTHO05D008979 7.4e-35 152.9 177 41.8
Cpa.g.sc16.57 Carica papaya HOM05D007340 ORTHO05D008979 9.6e-35 152.5 217 36.9
Thecc.04G270900 Theobroma cacao HOM05D007340 ORTHO05D008979 9.6e-35 152.5 217 37.8
Sed0013632 Sechium edule HOM05D007340 ORTHO05D008979 1.6e-34 151.8 196 39.8
Sc19g0004680 Simmondsia chinensis HOM05D007340 ORTHO05D008979 1.6e-34 151.8 212 35.8
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 3.7e-34 150.6 177 41.8
TPR.G14140 Trifolium pratense HOM05D007340 ORTHO05D008979 6.2e-34 149.8 179 41.3
CSS0023925 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 3.1e-33 147.5 207 40.1
CsaV3_3G008450 Cucumis sativus L. HOM05D007340 ORTHO05D008979 5.3e-33 146.7 201 36.3
MELO3C006065.2 Cucumis melo HOM05D007340 ORTHO05D008979 6.9e-33 146.4 201 35.8
AUR62021475 Chenopodium quinoa HOM05D007340 ORTHO05D008979 2.0e-32 144.8 157 43.9
Carub.0006s1725 Capsella rubella HOM05D007340 ORTHO05D008979 4.5e-32 143.7 208 36.1
EL10Ac8g18451 Beta vulgaris HOM05D007340 ORTHO05D008979 5.8e-32 143.3 156 41.7
CANSAT78G0497 Cannabis sativa HOM05D007340 ORTHO05D008979 7.6e-32 142.9 177 39.0
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 9.9e-32 142.5 155 43.9
Migut.G00250 Erythranthe guttata HOM05D007340 ORTHO05D008979 2.2e-31 141.4 231 38.5
PGR065G0011 Punica granatum HOM05D007340 ORTHO05D008979 2.2e-31 141.4 155 40.6
Phvul.003G036500 Phaseolus vulgaris HOM05D007340 ORTHO05D008979 1.4e-30 138.7 154 41.6
AUR62010965 Chenopodium quinoa HOM05D007340 ORTHO05D008979 1.9e-30 138.3 193 37.3
FAN17G2541 Fragaria x ananassa HOM05D007340 ORTHO05D008979 4.2e-30 137.1 198 36.9
BraA10t44135Z Brassica rapa HOM05D007340 ORTHO05D008979 5.5e-30 136.7 212 37.3
BcaB08g36633 Brassica carinata HOM05D007340 ORTHO05D008979 7.1e-30 136.3 215 35.8
BcaC04g18636 Brassica carinata HOM05D007340 ORTHO05D008979 9.3e-30 136.0 211 37.0
A10p20720 Brassica napus HOM05D007340 ORTHO05D008979 1.2e-29 135.6 215 36.7
AL6G30300 Arabidopsis lyrata HOM05D007340 ORTHO05D008979 1.6e-29 135.2 185 36.2
BolC9t58627H Brassica oleracea HOM05D007340 ORTHO05D008979 2.1e-29 134.8 215 35.3
Eucgr.C04132 Eucalyptus grandis HOM05D007340 ORTHO05D008979 1.3e-28 132.1 153 39.2
C09p57580 Brassica napus HOM05D007340 ORTHO05D008979 1.8e-28 131.7 215 34.9
Lj5g0026289 Lotus japonicus HOM05D007340 ORTHO05D008979 3.9e-28 130.6 155 40.6
AT5G18950 Arabidopsis thaliana HOM05D007340 ORTHO05D008979 1.9e-27 128.3 205 33.7
Eucgr.C03952 Eucalyptus grandis HOM05D007340 ORTHO05D008979 1.9e-27 128.3 153 37.3
CARHR194060 Cardamine hirsuta HOM05D007340 ORTHO05D008979 5.6e-27 126.7 194 34.0
Psat2g009000 Pisum sativum HOM05D007340 ORTHO05D008979 9.6e-27 125.9 191 38.7
Sp6g25440 Schrenkiella parvula HOM05D007340 ORTHO05D008979 9.6e-27 125.9 159 36.5
THA.LOC104827130 Tarenaya hassleriana HOM05D007340 ORTHO05D008979 1.3e-26 125.6 153 35.3
PSO170G6018 Papaver somniferum HOM05D007340 ORTHO05D008979 1.6e-26 125.2 156 37.2
SHI00355 Sapria himalayana HOM05D007340 ORTHO05D008979 2.4e-25 121.3 219 31.1
SalBow2G1987 Salvia bowleyana HOM05D007340 ORTHO05D008979 3.1e-25 120.9 169 34.9
Psat7g256640 Pisum sativum HOM05D007340 ORTHO05D008979 2.6e-24 117.9 172 37.8
Aqoxy1G00377 Aquilegia oxysepala HOM05D007340 ORTHO05D008979 5.8e-24 116.7 140 35.0
TPR.G15743 Trifolium pratense HOM05D007340 ORTHO05D008979 5.8e-24 116.7 114 46.5
Lsat_1_v5_gn_8_10680 Lactuca sativa HOM05D007340 ORTHO05D008979 7.1e-22 109.8 70 65.7
Glyma.07G161500 Glycine max HOM05D007340 ORTHO05D008979 4.6e-21 107.1 199 35.2
CSS0037889 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 3.7e-18 97.4 79 55.7
DCAR_030586 Daucus carota HOM05D007340 ORTHO05D008979 4.8e-18 97.1 91 50.5
VMungo1215G3235 Vigna mungo HOM05D007340 ORTHO05D008979 1.6e-13 82.0 130 35.4
CDE04G1227 Ceratophyllum demersum HOM05D007340 ORTHO05D008979 3.6e-13 80.9 162 29.6
BcaB01g05283 Brassica carinata HOM05D007340 ORTHO05D008979 8.8e-12 76.3 91 38.5
CSS0014652 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.5e-11 75.5 92 41.3
C03p10720 Brassica napus HOM05D007340 ORTHO05D008979 3.3e-11 74.3 98 39.8
Gohir.D08G046350 Gossypium hirsutum HOM05D007340 ORTHO05D008979 1.7e-10 72.0 68 42.6
Gorai.004G045600 Gossypium raimondii HOM05D007340 ORTHO05D008979 1.7e-10 72.0 68 42.6
CSS0002707 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 6.3e-10 70.1 76 46.1
Lsat_1_v5_gn_4_28380 Lactuca sativa HOM05D007340 ORTHO05D008979 1.4e-09 68.9 43 65.1
Thhalv10022683m.g Eutrema salsugineum HOM05D007700 ORTHO05D009669 1.2e-08 65.9 227 26.9
Dinv34879 Davidia involucrata HOM05D007347 ORTHO05D009296 2.9e-07 61.2 182 26.4
Sed0015131 Sechium edule HOM05D000242 ORTHO05D009669 8.5e-07 59.7 180 23.3
CAN.G407.98 Capsicum annuum HOM05D006819 ORTHO05D008763 1.9e-06 58.5 156 22.4
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 5.5e-06 57.0 195 24.1
Migut.D01062 Erythranthe guttata HOM05D006819 ORTHO05D008763 9.4e-06 56.2 161 26.1


User provided reference genes

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