Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 2.1e-42 175.3 88 100.0
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 1.1e-35 152.9 84 89.3
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.8e-33 145.6 80 88.8
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 5.1e-28 127.5 81 75.3
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 2.5e-27 125.2 86 68.6
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 1.6e-26 122.5 86 66.3
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.1e-26 122.1 80 72.5
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 6.2e-26 120.6 87 70.1
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 2.4e-25 118.6 81 74.1
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 3.1e-25 118.2 80 71.2
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 3.1e-25 118.2 80 71.2
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 3.1e-25 118.2 77 72.7
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 3.1e-25 118.2 74 77.0
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 5.3e-25 117.5 74 77.0
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 6.9e-25 117.1 85 67.1
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 6.9e-25 117.1 74 77.0
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 9.0e-25 116.7 83 71.1
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 9.0e-25 116.7 74 74.3
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 9.0e-25 116.7 81 74.1
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 1.2e-24 116.3 74 74.3
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 1.5e-24 115.9 74 74.3
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 2.0e-24 115.5 77 71.4
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 2.6e-24 115.2 74 74.3
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 2.6e-24 115.2 80 65.0
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 2.6e-24 115.2 81 70.4
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 3.4e-24 114.8 80 70.0
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 3.4e-24 114.8 81 71.6
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 3.4e-24 114.8 81 70.4
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 3.4e-24 114.8 73 76.7
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 3.4e-24 114.8 82 65.9
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 4.5e-24 114.4 74 77.0
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 4.5e-24 114.4 74 77.0
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 7.6e-24 113.6 81 72.8
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 7.6e-24 113.6 83 68.7
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 7.6e-24 113.6 73 76.7
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 1.0e-23 113.2 85 69.4
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 1.0e-23 113.2 76 72.4
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 1.3e-23 112.8 76 72.4
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 1.3e-23 112.8 72 75.0
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.3e-23 112.8 80 68.8
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 1.7e-23 112.5 76 72.4
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.7e-23 112.5 76 72.4
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 1.7e-23 112.5 79 68.4
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 2.2e-23 112.1 80 66.2
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 2.2e-23 112.1 81 71.6
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 2.9e-23 111.7 79 73.4
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 4.9e-23 110.9 79 69.6
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 6.5e-23 110.5 74 71.6
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 8.4e-23 110.2 79 67.1
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 1.1e-22 109.8 76 72.4
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 1.1e-22 109.8 73 75.3
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.4e-22 109.4 79 67.1
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 1.4e-22 109.4 73 72.6
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 1.9e-22 109.0 73 74.0
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 2.5e-22 108.6 80 66.2
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.5e-22 108.6 79 65.8
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 2.5e-22 108.6 85 63.5
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 3.2e-22 108.2 79 64.6
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 3.2e-22 108.2 79 64.6
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 3.2e-22 108.2 83 66.3
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 3.2e-22 108.2 71 76.1
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 4.2e-22 107.8 74 70.3
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 4.2e-22 107.8 74 68.9
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 4.2e-22 107.8 77 66.2
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 5.5e-22 107.5 77 64.9
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 7.1e-22 107.1 74 67.6
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 7.1e-22 107.1 79 69.6
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 7.1e-22 107.1 73 68.5
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 7.1e-22 107.1 83 63.9
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 7.1e-22 107.1 74 68.9
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 9.3e-22 106.7 74 67.6
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.2e-21 106.3 74 68.9
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.2e-21 106.3 74 68.9
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.2e-21 106.3 74 68.9
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 1.2e-21 106.3 79 62.0
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 1.2e-21 106.3 74 68.9
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.6e-21 105.9 80 65.0
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 2.1e-21 105.5 72 72.2
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 4.6e-21 104.4 82 64.6
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 6.1e-21 104.0 105 56.2
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 6.1e-21 104.0 73 72.6
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 1.0e-20 103.2 73 68.5
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 2.3e-20 102.1 80 63.8
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 3.9e-20 101.3 73 65.8
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 3.9e-20 101.3 73 69.9
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 5.1e-20 100.9 74 64.9
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 5.1e-20 100.9 73 64.4
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 6.7e-20 100.5 68 70.6
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 6.7e-20 100.5 72 69.4
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 8.7e-20 100.1 73 67.1
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.1e-19 99.8 73 67.1
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 1.9e-19 99.0 73 67.1
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 2.5e-19 98.6 73 67.1
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 4.3e-19 97.8 77 63.6
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 4.3e-19 97.8 73 65.8
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 4.3e-19 97.8 73 65.8
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 5.7e-19 97.4 64 73.4
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 1.3e-18 96.3 76 63.2
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.3e-18 96.3 72 65.3
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 2.2e-18 95.5 67 65.7
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 2.2e-18 95.5 76 59.2
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 2.4e-17 92.0 75 58.7
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 4.1e-17 91.3 52 86.5
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 5.3e-17 90.9 70 64.3
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 9.0e-17 90.1 81 55.6
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.5e-16 89.4 73 60.3
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 2.6e-16 88.6 59 74.6
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.7e-15 85.9 120 45.0
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 1.8e-12 75.9 74 50.0
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 2.3e-12 75.5 74 59.5
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 3.9e-12 74.7 155 35.5
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.1e-11 73.2 49 73.5
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 2.0e-11 72.4 69 49.3
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 3.3e-11 71.6 78 48.7
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 9.7e-11 70.1 79 53.2
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 6.3e-10 67.4 58 56.9
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 4.1e-09 64.7 76 42.1
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 2.9e-07 58.5 37 67.6
MBI13_g38674_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 3.8e-07 58.2 94 42.6
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 8.5e-07 57.0 71 38.0


User provided reference genes

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