Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0538601 Helianthus annuus HOM05D005642 ORTHO05D006672 1.8e-238 828.9 441 100.0
ECA246G0678 Erigeron canadensis HOM05D005642 ORTHO05D006672 5.6e-115 418.7 496 53.6
Lsat_1_v5_gn_3_25461 Lactuca sativa HOM05D005642 ORTHO05D006672 1.1e-105 387.9 458 54.8
CSS0029793 Camellia sinensis var. sinensis HOM05D005642 ORTHO05D006672 6.7e-60 235.7 439 40.5
Hma1.2p1_0379F.1_g139820 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 3.4e-56 223.4 347 43.8
Dinv03494 Davidia involucrata HOM05D005642 ORTHO05D006672 5.5e-54 216.1 367 41.1
Prupe.1G460900 Prunus persica HOM05D005642 ORTHO05D006672 1.6e-53 214.5 315 42.5
Actinidia06420 Actinidia chinensis HOM05D005642 ORTHO05D006672 1.3e-52 211.5 458 37.8
FAN27G2209 Fragaria x ananassa HOM05D005642 ORTHO05D006672 1.3e-50 204.9 385 39.5
MD15G1108600 Malus domestica HOM05D005642 ORTHO05D006672 1.6e-50 204.5 312 43.9
FAN20G1085 Fragaria x ananassa HOM05D005642 ORTHO05D006672 3.7e-50 203.4 367 41.1
Gohir.D07G001900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 4.8e-50 203.0 359 38.2
FvH4_2g36900 Fragaria vesca HOM05D005642 ORTHO05D006672 6.3e-50 202.6 376 40.4
GSVIVG01035528001 Vitis vinifera HOM05D005642 ORTHO05D006672 8.2e-50 202.2 355 40.3
Gorai.001G001600 Gossypium raimondii HOM05D005642 ORTHO05D006672 1.4e-49 201.4 359 38.4
THA.LOC104803598 Tarenaya hassleriana HOM05D005642 ORTHO05D006672 2.4e-49 200.7 385 39.5
Thecc.09G006400 Theobroma cacao HOM05D005642 ORTHO05D006672 2.4e-49 200.7 359 41.8
RcHm_v2.0_Chr6g0304881 Rosa chinensis HOM05D005642 ORTHO05D006672 3.1e-49 200.3 292 46.6
Ciclev10007752m.g Citrus clementina HOM05D005642 ORTHO05D006672 6.9e-49 199.1 372 40.3
Glyma.06G075900 Glycine max HOM05D005642 ORTHO05D006672 6.9e-49 199.1 397 39.3
QL12p025051 Quercus lobata HOM05D005642 ORTHO05D006672 9.0e-49 198.7 389 37.8
CsaV3_3G047060 Cucumis sativus L. HOM05D005642 ORTHO05D006672 1.2e-48 198.4 329 41.3
FAN15G2732 Fragaria x ananassa HOM05D005642 ORTHO05D006672 1.2e-48 198.4 383 39.2
Cc11_g04340 Coffea canephora HOM05D005642 ORTHO05D006672 2.0e-48 197.6 416 40.6
Gohir.A07G001500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 2.0e-48 197.6 362 37.3
VMungo1309G0073 Vigna mungo HOM05D005642 ORTHO05D006672 2.6e-48 197.2 417 39.1
Manes.03G003300 Manihot esculenta HOM05D005642 ORTHO05D006672 7.7e-48 195.7 337 39.5
Lsat_1_v5_gn_5_61101 Lactuca sativa HOM05D005642 ORTHO05D006672 1.3e-47 194.9 442 36.7
CANSAT78G0024 Cannabis sativa HOM05D005642 ORTHO05D006672 8.5e-47 192.2 330 40.0
Potri.006G275200 Populus trichocarpa HOM05D005642 ORTHO05D006672 1.1e-46 191.8 332 41.0
Phvul.009G100600 Phaseolus vulgaris HOM05D005642 ORTHO05D006672 3.2e-46 190.3 392 40.1
Ca_15671_v3 Cicer arietinum L. HOM05D005642 ORTHO05D006672 4.2e-46 189.9 461 37.3
Potri.018G006200 Populus trichocarpa HOM05D005642 ORTHO05D006672 5.5e-46 189.5 336 40.2
DCAR_004570 Daucus carota HOM05D005642 ORTHO05D006672 2.7e-45 187.2 411 36.7
Peaxi162Scf00045g01740 Petunia axillaris HOM05D005642 ORTHO05D006672 2.7e-45 187.2 284 46.8
TAR383G0661 Trochodendron aralioides HOM05D005642 ORTHO05D006672 4.6e-45 186.4 404 36.1
Lj1g0005947 Lotus japonicus HOM05D005642 ORTHO05D006672 1.0e-44 185.3 334 39.5
Sopen08g002430 Solanum pennellii HOM05D005642 ORTHO05D006672 1.0e-44 185.3 297 41.8
arahy.Tifrunner.gnm1.ann1.KDL0BF Arachis hypogaea HOM05D005642 ORTHO05D006672 5.1e-44 183.0 345 40.3
COL.COLO4_19042 Corchorus olitorius HOM05D005642 ORTHO05D006672 6.7e-44 182.6 410 35.9
ClCG05G017540 Citrullus lanatus HOM05D005642 ORTHO05D006672 1.5e-43 181.4 439 34.9
Migut.A00441 Erythranthe guttata HOM05D005642 ORTHO05D006672 1.5e-43 181.4 393 37.7
Psat5g024120 Pisum sativum HOM05D005642 ORTHO05D006672 1.5e-43 181.4 450 36.0
Sabra06G0213000 Salix brachista HOM05D005642 ORTHO05D006672 2.5e-43 180.6 372 36.8
CiPaw.07G213400 Carya illinoinensis HOM05D005642 ORTHO05D006672 9.7e-43 178.7 397 36.5
arahy.Tifrunner.gnm1.ann1.4FD105 Arachis hypogaea HOM05D005642 ORTHO05D006672 2.2e-42 177.6 392 37.2
Duzib168G1720 Durio zibethinus HOM05D005642 ORTHO05D006672 2.2e-42 177.6 388 33.8
HanXRQChr13g0412371 Helianthus annuus HOM05D005642 ORTHO05D006672 2.2e-42 177.6 447 35.8
Solyc08g006480.3 Solanum lycopersicum HOM05D005642 ORTHO05D006672 2.2e-42 177.6 360 37.8
MSTRG.25774 Avicennia marina HOM05D005642 ORTHO05D006672 3.7e-42 176.8 427 36.1
Sp7g29290 Schrenkiella parvula HOM05D005642 ORTHO05D006672 3.7e-42 176.8 339 38.1
Hma1.2p1_0379F.1_g139825 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 4.8e-42 176.4 222 49.5
Sed0007069 Sechium edule HOM05D005642 ORTHO05D006672 8.2e-42 175.6 310 40.6
A01p06850 Brassica napus HOM05D005642 ORTHO05D006672 1.4e-41 174.9 332 38.9
Hund03285 Selenicereus undatus HOM05D005642 ORTHO05D006672 1.4e-41 174.9 293 42.3
Hund19402 Selenicereus undatus HOM05D005642 ORTHO05D006672 1.4e-41 174.9 471 34.6
Medtr3g108780 Medicago truncatula HOM05D005642 ORTHO05D006672 1.8e-41 174.5 456 36.6
CARHR239310 Cardamine hirsuta HOM05D005642 ORTHO05D006672 2.4e-41 174.1 304 40.1
TWI63G0215 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 2.4e-41 174.1 308 39.3
Lalb_Chr11g0064111 Lupinus albus HOM05D005642 ORTHO05D006672 4.1e-41 173.3 395 37.5
Lalb_Chr23g0269061 Lupinus albus HOM05D005642 ORTHO05D006672 6.9e-41 172.6 403 38.0
BraA08t33825Z Brassica rapa HOM05D005642 ORTHO05D006672 1.2e-40 171.8 327 37.3
CAN.G673.14 Capsicum annuum HOM05D005642 ORTHO05D006672 1.5e-40 171.4 366 36.1
BcaB03g12695 Brassica carinata HOM05D005642 ORTHO05D006672 2.0e-40 171.0 405 34.8
AUR62020612 Chenopodium quinoa HOM05D005642 ORTHO05D006672 2.6e-40 170.6 380 34.2
BraA01t00636Z Brassica rapa HOM05D005642 ORTHO05D006672 3.4e-40 170.2 302 40.4
Migut.E01422 Erythranthe guttata HOM05D005642 ORTHO05D006672 4.5e-40 169.9 311 38.3
Haze_21725 Corylus avellana HOM05D005642 ORTHO05D006672 5.9e-40 169.5 353 36.5
BcaC09g51922 Brassica carinata HOM05D005642 ORTHO05D006672 7.7e-40 169.1 332 40.7
A08p18620 Brassica napus HOM05D005642 ORTHO05D006672 7.7e-40 169.1 327 36.1
C01p07620 Brassica napus HOM05D005642 ORTHO05D006672 7.7e-40 169.1 332 40.7
BolC3t21109H Brassica oleracea HOM05D005642 ORTHO05D006672 7.7e-40 169.1 335 36.1
Carub.0007s0913 Capsella rubella HOM05D005642 ORTHO05D006672 1.0e-39 168.7 417 35.0
BcaC01g01089 Brassica carinata HOM05D005642 ORTHO05D006672 1.3e-39 168.3 335 36.1
C03p87980 Brassica napus HOM05D005642 ORTHO05D006672 1.3e-39 168.3 335 36.1
SalBow8G4661 Salvia bowleyana HOM05D005642 ORTHO05D006672 2.9e-39 167.2 387 34.6
Thhalv10024763m.g Eutrema salsugineum HOM05D005642 ORTHO05D006672 3.8e-39 166.8 363 33.9
BolC1t00742H Brassica oleracea HOM05D005642 ORTHO05D006672 5.0e-39 166.4 303 39.3
PGR044G2675 Punica granatum HOM05D005642 ORTHO05D006672 5.0e-39 166.4 318 38.1
TWI32G0776 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 5.0e-39 166.4 433 34.2
BcaNung04589 Brassica carinata HOM05D005642 ORTHO05D006672 1.4e-38 164.9 334 38.3
Cfa013263 Carpinus fangiana HOM05D005642 ORTHO05D006672 1.9e-38 164.5 272 42.3
Ah.11g043760 Amaranthus hybridus HOM05D005642 ORTHO05D006672 2.5e-38 164.1 326 39.0
ECA240G1730 Erigeron canadensis HOM05D000542 ORTHO05D006672 4.2e-38 163.3 434 33.4
Nn8g40457 Nelumbo nucifera HOM05D005642 ORTHO05D006672 9.4e-38 162.2 457 32.8
Sabra18G0014300 Salix brachista HOM05D005642 ORTHO05D006672 1.6e-37 161.4 329 37.4
AL7G20630 Arabidopsis lyrata HOM05D005642 ORTHO05D006672 6.1e-37 159.5 332 37.3
EL10Ac2g03740 Beta vulgaris HOM05D005642 ORTHO05D006672 7.9e-37 159.1 314 35.7
SGA_v2.0_scaffold27G11668 Striga asiatica HOM05D005642 ORTHO05D006672 2.3e-36 157.5 425 35.3
AT4G31430 Arabidopsis thaliana HOM05D005642 ORTHO05D006672 3.9e-36 156.8 340 37.1
Aa31LG2G18900 Aethionema arabicum HOM05D005642 ORTHO05D006672 2.2e-34 151.0 355 34.4
Glyma.04G074900 Glycine max HOM05D005642 ORTHO05D006672 2.8e-34 150.6 269 41.3
HanXRQChr03g0082481 Helianthus annuus HOM05D005642 ORTHO05D006672 1.1e-33 148.7 200 47.0
MBI16_g31790_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 1.1e-33 148.7 413 30.3
MELO3C003630.2 Cucumis melo HOM05D005642 ORTHO05D006672 1.4e-33 148.3 312 35.9
BcaNung04578 Brassica carinata HOM05D005642 ORTHO05D006672 2.4e-33 147.5 454 32.2
Oeu019279.2 Olea europaea HOM05D005642 ORTHO05D006672 5.3e-33 146.4 355 35.5
Nitab4.5_0004131g0010 Nicotiana tabacum HOM05D005642 ORTHO05D006672 1.7e-31 141.4 334 35.9
Eucgr.C04006 Eucalyptus grandis HOM05D005642 ORTHO05D006672 5.0e-31 139.8 288 38.9
MD08G1130500 Malus domestica HOM05D005642 ORTHO05D006672 1.1e-30 138.7 269 37.9
Gorai.009G068300 Gossypium raimondii HOM05D005642 ORTHO05D006672 1.8e-28 131.3 327 32.4
Sc23g0006020 Simmondsia chinensis HOM05D005642 ORTHO05D006672 2.3e-28 131.0 197 41.1
Gohir.D05G067500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 3.0e-28 130.6 368 31.5
vmacro00200 Vaccinium macrocarpon HOM05D005642 ORTHO05D006672 3.0e-28 130.6 516 26.4
Gohir.A05G064900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 5.2e-28 129.8 338 32.2
PSO170G3270 Papaver somniferum HOM05D005642 ORTHO05D006672 6.7e-28 129.4 348 31.3
MBI14_g08146_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 4.4e-27 126.7 382 30.4
Aqoxy7G02962 Aquilegia oxysepala HOM05D005642 ORTHO05D006672 1.8e-25 121.3 448 30.1
SHI21128 Sapria himalayana HOM05D005642 ORTHO05D006672 2.4e-25 120.9 168 39.3
Nitab4.5_0000555g0260 Nicotiana tabacum HOM05D005642 ORTHO05D006672 3.1e-25 120.6 176 42.0
Cpa.g.sc23.5 Carica papaya HOM05D005642 ORTHO05D006672 2.0e-24 117.9 308 31.5
Oeu048000.1 Olea europaea HOM05D005642 ORTHO05D006672 5.9e-24 116.3 352 33.2
SalBow4G3316 Salvia bowleyana HOM05D005642 ORTHO05D006672 5.9e-24 116.3 445 29.0
Atru.chr7.2633 Acer truncatum HOM05D005642 ORTHO05D006672 7.7e-24 115.9 281 35.2
PSO063G4833 Papaver somniferum HOM05D005642 ORTHO05D006672 2.9e-23 114.0 353 29.7
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 1.6e-21 108.2 352 27.8
Oeu014127.1 Olea europaea HOM05D005642 ORTHO05D006672 3.6e-21 107.1 164 42.7
AUR62009051 Chenopodium quinoa HOM05D005642 ORTHO05D006672 4.7e-21 106.7 454 27.1
BraA03t15110Z Brassica rapa HOM05D005642 ORTHO05D006672 1.4e-17 95.1 178 36.0
CDE07G1180 Ceratophyllum demersum HOM05D005642 ORTHO05D006672 1.4e-17 95.1 220 31.4
Lsat_1_v5_gn_3_131141 Lactuca sativa HOM05D000032 ORTHO05D006672 2.7e-16 90.9 165 38.8
HPP92_015370 Vanilla planifolia HOM05D005642 ORTHO05D006672 2.7e-16 90.9 291 27.8
unitig_747.g21903 Utricularia gibba HOM05D005642 ORTHO05D006672 2.3e-12 77.8 359 26.7
Zm00001eb432470 Zea mays HOM05D005642 ORTHO05D006672 5.2e-12 76.6 459 25.9
Atru.chr7.2632 Acer truncatum HOM05D005642 ORTHO05D006672 2.0e-11 74.7 151 39.7
unitig_0.g2821 Utricularia gibba HOM05D005642 ORTHO05D006672 1.3e-10 72.0 160 36.9
arahy.Tifrunner.gnm1.ann1.GW4HJP Arachis hypogaea HOM05D000013 ORTHO05D021469 2.2e-10 71.2 101 43.6
Rhsim09G0061700 Rhododendron simsii HOM05D005642 ORTHO05D006672 2.2e-10 71.2 180 30.6
Zm00001eb067810 Zea mays HOM05D005642 ORTHO05D006672 2.2e-10 71.2 218 29.8
HanXRQChr06g0180441 Helianthus annuus HOM05D006756 ORTHO05D001869 2.8e-10 70.9 256 30.9
DCAR_000668 Daucus carota HOM05D005642 ORTHO05D006672 3.7e-10 70.5 403 24.8
SEGI_30019 Sequoiadendron giganteum HOM05D003044 ORTHO05D006672 6.3e-10 69.7 303 29.7
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 1.4e-09 68.6 251 29.5
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 2.4e-09 67.8 218 31.7
MD00G1205700 Malus domestica HOM05D005642 ORTHO05D006672 2.0e-08 64.7 65 50.8
Os04g0655600 Oryza sativa ssp. japonica HOM05D005642 ORTHO05D006672 2.0e-08 64.7 347 24.5
Hund09258 Selenicereus undatus HOM05D006756 ORTHO05D001869 1.0e-07 62.4 257 27.6
Sc18g0000500 Simmondsia chinensis HOM05D006756 ORTHO05D001869 1.0e-07 62.4 257 28.4
Psat6g049400 Pisum sativum HOM05D003044 ORTHO05D001869 1.3e-07 62.0 257 28.8
SGA_v2.0_scaffold169G38591 Striga asiatica HOM05D005642 ORTHO05D006672 2.9e-07 60.8 143 39.2
vmacro20571 Vaccinium macrocarpon HOM05D006756 ORTHO05D001869 2.9e-07 60.8 264 29.5
Sed0023754 Sechium edule HOM05D003044 ORTHO05D001869 3.8e-07 60.5 278 26.6
RcHm_v2.0_Chr2g0088181 Rosa chinensis HOM05D006756 ORTHO05D001869 5.0e-07 60.1 249 28.5
SGA_v2.0_scaffold121G33034 Striga asiatica HOM05D005642 ORTHO05D006672 5.0e-07 60.1 190 27.4
TAR636G1345 Trochodendron aralioides HOM05D003044 ORTHO05D001869 5.0e-07 60.1 239 25.5
Peaxi162Scf00046g00819 Petunia axillaris HOM05D006756 ORTHO05D001869 1.1e-06 58.9 257 26.5
CsaV3_6G004440 Cucumis sativus L. HOM05D003044 ORTHO05D001869 1.5e-06 58.5 278 25.9
Actinidia21975 Actinidia chinensis HOM05D006756 ORTHO05D001869 2.5e-06 57.8 238 29.4
Ciclev10014057m.g Citrus clementina HOM05D003044 ORTHO05D001869 2.5e-06 57.8 277 25.3
ECA240G3825 Erigeron canadensis HOM05D000094 ORTHO05D002063 2.5e-06 57.8 73 46.6
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 3.3e-06 57.4 81 43.2
THA.LOC104811027 Tarenaya hassleriana HOM05D006756 ORTHO05D001869 3.3e-06 57.4 253 25.3
arahy.Tifrunner.gnm1.ann1.T032QQ Arachis hypogaea HOM05D005642 ORTHO05D010845 4.3e-06 57.0 89 46.1
Rhsim01G0068000 Rhododendron simsii HOM05D006756 ORTHO05D001869 4.3e-06 57.0 302 26.5
ATR0697G055 Amborella trichopoda HOM05D003044 ORTHO05D001869 5.6e-06 56.6 311 25.4
TPR.G19799 Trifolium pratense HOM05D003044 ORTHO05D001869 5.6e-06 56.6 225 25.3
MD15G1171200 Malus domestica HOM05D006756 ORTHO05D001869 7.3e-06 56.2 272 26.1
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 9.5e-06 55.8 256 24.6


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