Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0537771 Helianthus annuus HOM05D020097 ORTHO05D025295 8.9e-177 623.6 343 100.0
HanXRQChr17g0537781 Helianthus annuus HOM05D020097 ORTHO05D025295 1.8e-84 317.0 287 60.3
HanXRQChr17g0537841 Helianthus annuus HOM05D020097 ORTHO05D025295 9.4e-70 268.1 303 51.8
ECA248G3273 Erigeron canadensis HOM05D020097 ORTHO05D025295 2.5e-62 243.4 281 49.8
ECA232G3396 Erigeron canadensis HOM05D020097 ORTHO05D025295 3.5e-56 223.0 298 45.0
ECA246G2483 Erigeron canadensis HOM05D000455 ORTHO05D000434 1.3e-47 194.5 234 47.4
HanXRQChr01g0011291 Helianthus annuus HOM05D020097 ORTHO05D022532 4.8e-21 106.3 274 28.5
HanXRQChr17g0537901 Helianthus annuus HOM05D022966 ORTHO05D022532 1.0e-15 88.6 154 37.7
HanXRQChr17g0537811 Helianthus annuus HOM05D022966 ORTHO05D022532 1.5e-14 84.7 157 38.2
ECA246G2572 Erigeron canadensis HOM05D000413 ORTHO05D000292 1.9e-14 84.3 233 29.2
HanXRQChr17g0537911 Helianthus annuus HOM05D022966 ORTHO05D022532 9.6e-14 82.0 148 39.2
ECA248G2105 Erigeron canadensis HOM05D022966 ORTHO05D022532 7.1e-09 65.9 161 29.8
HanXRQChr15g0492841 Helianthus annuus HOM05D020468 ORTHO05D222733 4.6e-08 63.2 28 96.4
HanXRQChr13g0405471 Helianthus annuus HOM05D020468 ORTHO05D227200 1.8e-07 61.2 28 96.4
Cc00_g10740 Coffea canephora HOM05D000455 ORTHO05D010375 3.9e-07 60.1 82 41.5
Cc06_g22030 Coffea canephora HOM05D000455 ORTHO05D010375 3.9e-07 60.1 82 41.5
HanXRQChr02g0047091 Helianthus annuus HOM05D000455 ORTHO05D011724 6.7e-07 59.3 81 35.8
Cc11_g02140 Coffea canephora HOM05D000455 ORTHO05D000434 8.7e-07 58.9 82 40.2
ECA246G4950 Erigeron canadensis HOM05D007880 ORTHO05D003386 8.7e-07 58.9 184 30.4
CSS0010287 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.1e-06 58.5 79 39.2
CAN.G322.7 Capsicum annuum HOM05D000455 ORTHO05D000434 1.1e-06 58.5 79 38.0
CSS0000650 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.9e-06 57.8 79 39.2
CSS0032249 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.9e-06 57.8 79 39.2
Lj8C207T2 Lonicera japonica HOM05D000455 ORTHO05D000434 2.5e-06 57.4 77 36.4
ClCG07G011370 Citrullus lanatus HOM05D000455 ORTHO05D000434 3.3e-06 57.0 79 38.0
ATR1159G043 Amborella trichopoda HOM05D000455 ORTHO05D000434 4.3e-06 56.6 79 41.8
Cc00_g35530 Coffea canephora HOM05D000455 ORTHO05D010375 5.6e-06 56.2 82 39.0
MELO3C016260.2 Cucumis melo HOM05D000455 ORTHO05D000434 5.6e-06 56.2 79 38.0
CsaV3_4G006840 Cucumis sativus L. HOM05D000455 ORTHO05D000434 7.4e-06 55.8 79 36.7
vmacro11541 Vaccinium macrocarpon HOM05D000112 ORTHO05D000564 7.4e-06 55.8 75 45.3
Solyc08g008410.3 Solanum lycopersicum HOM05D000455 ORTHO05D000434 9.6e-06 55.5 79 40.5


User provided reference genes

Program Settings