Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 4.6e-116 421.4 235 100.0
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 1.3e-65 253.8 140 92.9
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 3.7e-65 252.3 144 91.0
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.4e-59 233.8 140 82.9
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 3.9e-59 232.3 140 83.6
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 6.7e-59 231.5 150 78.0
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 6.7e-59 231.5 140 82.9
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 8.8e-59 231.1 140 84.3
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 2.5e-58 229.6 140 83.6
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 3.3e-58 229.2 139 82.0
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 5.7e-58 228.4 139 81.3
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 9.7e-58 227.6 140 81.4
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 2.2e-57 226.5 141 80.1
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 3.7e-57 225.7 140 79.3
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 4.8e-57 225.3 140 80.7
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 6.3e-57 224.9 139 81.3
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 6.3e-57 224.9 140 79.3
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 8.2e-57 224.6 139 81.3
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 8.2e-57 224.6 140 80.7
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 1.1e-56 224.2 138 79.7
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 1.4e-56 223.8 139 82.0
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.4e-56 223.8 143 78.3
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 1.4e-56 223.8 140 79.3
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 1.4e-56 223.8 139 82.0
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.8e-56 223.4 139 82.0
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 3.1e-56 222.6 137 80.3
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 3.1e-56 222.6 140 80.0
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 4.1e-56 222.2 140 78.6
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 4.1e-56 222.2 140 78.6
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 4.1e-56 222.2 137 79.6
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 4.1e-56 222.2 139 79.9
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 5.3e-56 221.9 139 80.6
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 5.3e-56 221.9 143 76.2
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 9.1e-56 221.1 140 77.1
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 1.2e-55 220.7 140 77.1
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 1.2e-55 220.7 139 79.9
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 1.5e-55 220.3 139 78.4
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 2.0e-55 219.9 138 80.4
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 2.0e-55 219.9 161 67.7
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 3.4e-55 219.2 140 75.0
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 7.7e-55 218.0 140 77.9
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 1.7e-54 216.9 138 76.8
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 2.2e-54 216.5 140 75.0
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 2.9e-54 216.1 142 79.6
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 2.9e-54 216.1 140 77.9
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 3.8e-54 215.7 147 74.8
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.4e-53 213.8 138 77.5
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 1.9e-53 213.4 138 77.5
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 1.9e-53 213.4 139 78.4
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 2.5e-53 213.0 139 77.0
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 2.5e-53 213.0 140 74.3
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 4.2e-53 212.2 139 74.1
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 5.5e-53 211.8 151 69.5
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 5.5e-53 211.8 138 78.3
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 7.2e-53 211.5 139 77.7
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 9.4e-53 211.1 139 77.7
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.2e-52 210.7 139 73.4
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 7.9e-52 208.0 138 74.6
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.0e-51 207.6 139 78.4
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 5.1e-51 205.3 137 75.2
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 6.7e-51 204.9 132 79.5
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 8.8e-51 204.5 195 57.4
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 2.6e-50 203.0 150 70.7
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 4.4e-50 202.2 124 80.6
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 7.4e-50 201.4 150 64.7
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 9.7e-50 201.1 145 71.0
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 1.3e-49 200.7 135 74.1
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 1.7e-49 200.3 140 75.0
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 4.8e-49 198.7 140 74.3
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 8.2e-49 198.0 142 71.8
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 1.8e-48 196.8 127 75.6
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 9.1e-48 194.5 148 68.2
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.2e-47 194.1 142 71.8
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 7.7e-47 191.4 187 59.4
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.0e-46 191.0 140 71.4
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 2.2e-46 189.9 142 67.6
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 5.0e-46 188.7 141 66.7
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 1.5e-45 187.2 147 69.4
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 2.7e-44 183.0 108 82.4
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 4.7e-44 182.2 137 68.6
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.3e-43 179.9 139 66.9
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 4.0e-43 179.1 107 79.4
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 3.7e-41 172.6 152 59.9
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 5.3e-40 168.7 139 61.9
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 7.0e-40 168.3 147 58.5
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 9.1e-40 167.9 107 73.8
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 9.1e-40 167.9 139 61.2
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 1.6e-39 167.2 139 59.7
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.6e-39 167.2 139 59.7
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 2.7e-39 166.4 139 61.2
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 2.7e-39 166.4 139 61.2
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 4.5e-39 165.6 139 59.0
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 4.5e-39 165.6 140 60.7
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 5.9e-39 165.2 139 60.4
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.3e-38 164.1 139 59.7
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.3e-38 164.1 139 59.7
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 1.3e-38 164.1 127 64.6
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.7e-38 163.7 139 58.3
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 3.8e-38 162.5 136 60.3
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 6.5e-38 161.8 139 59.0
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 1.5e-37 160.6 140 57.9
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 3.2e-37 159.5 123 69.9
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 9.4e-37 157.9 144 56.2
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 6.8e-35 151.8 139 53.2
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 8.8e-35 151.4 113 67.3
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 8.8e-35 151.4 136 61.8
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 7.7e-31 138.3 111 64.0
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 3.8e-30 136.0 102 67.6
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 3.2e-29 132.9 135 51.1
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 7.2e-29 131.7 149 52.3
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 5.7e-26 122.1 149 51.7
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 1.7e-25 120.6 81 72.8
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 5.9e-23 112.1 68 82.4
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 9.5e-21 104.8 65 75.4
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 7.0e-16 88.6 71 60.6
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 9.2e-16 88.2 91 53.8
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 7.3e-13 78.6 113 43.4
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 9.5e-13 78.2 51 74.5
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 1.3e-06 57.8 138 30.4


User provided reference genes

Program Settings