Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 1.2e-80 303.1 159 100.0
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 9.4e-65 250.4 156 82.7
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 1.3e-61 240.0 145 83.4
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.9e-57 226.1 159 69.8
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 1.8e-55 219.5 161 69.6
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 3.0e-55 218.8 156 68.6
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 5.2e-55 218.0 157 69.4
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 6.8e-55 217.6 154 66.2
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 3.4e-54 215.3 149 67.1
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 2.9e-53 212.2 156 68.6
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 2.9e-53 212.2 144 71.5
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 6.3e-53 211.1 143 72.0
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 8.3e-53 210.7 156 69.9
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 8.3e-53 210.7 148 69.6
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 1.1e-52 210.3 153 68.0
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 5.4e-52 208.0 155 67.7
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 9.2e-52 207.2 144 69.4
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 9.2e-52 207.2 144 70.1
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 1.2e-51 206.8 144 70.8
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 1.6e-51 206.5 148 67.6
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 3.5e-51 205.3 147 70.1
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 4.6e-51 204.9 156 63.5
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 4.6e-51 204.9 147 67.3
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 5.9e-51 204.5 156 62.8
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 5.9e-51 204.5 147 70.7
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 2.3e-50 202.6 143 67.1
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 2.3e-50 202.6 160 65.6
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 3.9e-50 201.8 143 69.2
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 5.0e-50 201.4 157 62.4
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 8.6e-50 200.7 146 67.1
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 1.1e-49 200.3 191 57.6
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 2.5e-49 199.1 159 62.3
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 3.3e-49 198.7 153 63.4
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 4.3e-49 198.4 159 61.0
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 1.2e-48 196.8 153 63.4
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 1.6e-48 196.4 159 62.9
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 1.0e-47 193.7 156 62.2
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 3.1e-47 192.2 184 57.6
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 4.0e-47 191.8 144 61.1
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 5.2e-47 191.4 147 65.3
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 5.2e-47 191.4 169 58.0
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 2.6e-46 189.1 147 63.3
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 3.4e-46 188.7 145 60.7
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 3.4e-46 188.7 161 63.4
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 4.4e-46 188.3 147 63.9
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 9.8e-46 187.2 148 62.2
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 1.3e-45 186.8 160 58.8
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 1.3e-45 186.8 159 59.1
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 1.7e-45 186.4 131 71.0
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 2.2e-45 186.0 157 56.1
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 2.9e-45 185.7 130 70.0
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 2.9e-45 185.7 148 63.5
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 1.1e-44 183.7 159 57.2
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.4e-44 183.3 123 69.9
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 2.4e-44 182.6 148 63.5
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 4.1e-44 181.8 159 60.4
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 7.0e-44 181.0 157 58.0
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 7.0e-44 181.0 147 59.2
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 1.2e-43 180.3 120 70.8
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 2.7e-43 179.1 144 61.8
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 3.5e-43 178.7 133 65.4
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 4.6e-43 178.3 155 55.5
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 7.8e-43 177.6 143 60.8
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.0e-42 177.2 159 56.0
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.0e-42 177.2 159 56.0
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.0e-42 177.2 159 56.0
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 1.0e-42 177.2 148 56.8
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 1.0e-42 177.2 155 58.1
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 1.3e-42 176.8 118 72.9
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.7e-42 176.4 169 55.6
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 3.9e-42 175.3 177 53.7
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 3.9e-42 175.3 122 72.1
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 3.9e-42 175.3 159 57.2
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 8.6e-42 174.1 147 59.9
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 1.5e-41 173.3 155 56.1
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 7.3e-41 171.0 147 59.2
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 2.8e-40 169.1 155 56.1
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 3.6e-40 168.7 159 54.7
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.1e-39 167.2 154 55.2
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 1.1e-39 167.2 159 54.7
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 3.1e-39 165.6 121 65.3
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 4.4e-38 161.8 159 52.8
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 5.8e-38 161.4 144 56.2
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.3e-37 160.2 135 58.5
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 6.4e-37 157.9 147 54.4
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 6.4e-37 157.9 147 54.4
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.1e-36 157.1 115 66.1
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.3e-34 150.2 111 60.4
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 3.9e-34 148.7 112 65.2
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 3.9e-34 148.7 131 58.0
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.5e-33 146.7 109 65.1
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.5e-33 146.0 154 48.1
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.2e-32 143.7 94 71.3
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 2.1e-32 142.9 125 57.6
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 2.8e-32 142.5 148 52.0
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 8.4e-29 131.0 108 58.3
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 1.2e-27 127.1 121 54.5
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 6.0e-27 124.8 135 48.9
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.3e-26 123.6 143 43.4
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 3.9e-26 122.1 143 43.4
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.1e-25 120.6 128 46.9
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.6e-24 116.7 81 70.4
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 1.5e-22 110.2 81 64.2
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.0e-22 109.8 88 60.2
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 2.6e-22 109.4 123 41.5
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 6.4e-21 104.8 127 40.9
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 8.4e-21 104.4 68 77.9
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 4.2e-20 102.1 79 63.3
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.6e-19 100.1 66 71.2
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 3.5e-19 99.0 68 67.6
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 4.6e-19 98.6 70 68.6
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 3.0e-18 95.9 83 60.2
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 4.0e-15 85.5 97 43.3
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 3.5e-11 72.4 73 52.1
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.1e-09 67.4 61 57.4
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 1.9e-09 66.6 44 65.9
Cre03.g201500 Chlamydomonas reinhardtii HOM05D006886 ORTHO05D008494 1.6e-08 63.5 140 27.1


User provided reference genes

Program Settings