Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 8.8e-204 713.4 357 100.0
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 1.9e-174 615.9 357 85.2
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 2.1e-173 612.5 357 82.9
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 1.1e-142 510.4 350 72.3
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 5.3e-140 501.5 356 69.1
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 5.3e-140 501.5 357 68.6
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.2e-139 500.4 357 68.6
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 1.5e-139 500.0 356 66.9
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.6e-139 499.2 350 69.7
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 3.4e-139 498.8 351 71.2
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 1.0e-138 497.3 352 69.3
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 1.0e-138 497.3 355 69.3
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 2.9e-138 495.7 356 70.2
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 3.8e-138 495.4 353 69.1
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 3.8e-138 495.4 350 69.7
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 4.9e-138 495.0 356 66.3
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 8.4e-138 494.2 349 69.3
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.1e-137 493.8 350 69.1
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.1e-137 493.8 350 70.0
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 2.5e-137 492.7 352 67.6
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 3.2e-137 492.3 350 69.7
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 7.1e-137 491.1 356 67.4
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 7.1e-137 491.1 350 67.1
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 1.6e-136 490.0 342 71.6
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 1.6e-136 490.0 350 69.1
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 1.0e-135 487.3 352 67.3
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 1.8e-135 486.5 389 63.8
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 5.1e-135 485.0 360 65.0
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 6.7e-135 484.6 349 67.0
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.5e-134 483.4 352 67.3
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 1.5e-134 483.4 352 66.8
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 2.5e-134 482.6 349 68.5
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 4.3e-134 481.9 351 66.7
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 5.7e-134 481.5 356 68.5
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 1.6e-133 479.9 355 65.9
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.1e-133 479.6 350 68.0
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 4.8e-133 478.4 355 66.8
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 1.4e-132 476.9 351 67.0
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 1.4e-132 476.9 350 67.1
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.2e-131 473.8 350 66.9
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 4.5e-131 471.9 354 65.8
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 5.9e-131 471.5 350 66.0
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 5.9e-131 471.5 351 66.1
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 1.3e-130 470.3 350 66.6
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.2e-130 469.5 350 66.3
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 3.8e-130 468.8 353 64.0
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 3.8e-130 468.8 351 66.1
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 3.8e-130 468.8 354 65.8
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 6.5e-130 468.0 356 64.9
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 6.5e-130 468.0 356 64.9
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 6.5e-130 468.0 356 64.9
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 1.1e-129 467.2 353 65.2
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 1.4e-129 466.8 350 65.1
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 7.2e-129 464.5 355 65.9
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 9.3e-129 464.2 354 64.7
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 1.0e-127 460.7 355 65.6
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 5.1e-127 458.4 395 60.8
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 8.7e-127 457.6 349 66.2
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 1.1e-126 457.2 356 62.9
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 3.3e-126 455.7 413 57.9
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 3.3e-126 455.7 353 62.9
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 5.7e-126 454.9 350 62.9
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 1.6e-125 453.4 355 60.8
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 4.8e-125 451.8 357 61.6
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 2.4e-124 449.5 353 62.3
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 4.5e-123 445.3 352 60.8
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 2.2e-122 443.0 316 68.4
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 3.8e-122 442.2 351 64.4
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 6.5e-122 441.4 316 68.7
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.7e-120 436.0 313 69.6
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 8.8e-119 431.0 313 67.7
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 3.3e-118 429.1 314 67.8
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 2.8e-117 426.0 357 58.8
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.8e-116 423.3 353 60.1
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 4.1e-116 422.2 322 65.8
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 2.9e-114 416.0 351 59.3
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 2.5e-113 412.9 346 57.5
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 4.7e-112 408.7 353 58.6
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 1.3e-106 390.6 354 56.2
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.2e-104 384.0 280 67.9
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.1e-97 360.9 348 55.7
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 9.8e-94 347.8 227 74.4
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 8.3e-93 344.7 335 48.4
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.8e-90 335.9 342 48.5
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 9.5e-89 331.3 328 50.6
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 1.5e-86 323.9 236 66.1
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 6.3e-85 318.5 344 50.6
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 5.9e-83 312.0 335 47.5
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 9.2e-68 261.5 208 63.9
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 4.0e-63 246.1 301 47.2
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 1.2e-62 244.6 470 33.2
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 4.4e-62 242.7 175 65.7
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 5.8e-54 215.7 180 57.8
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.3e-42 177.2 130 61.5
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.3e-42 177.2 130 61.5
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.3e-40 171.4 169 54.4
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 3.4e-30 136.7 264 34.8
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 2.2e-29 134.0 169 43.8
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 7.1e-20 102.4 88 53.4
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 1.3e-16 91.7 74 62.2
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.4e-15 88.2 92 42.4
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 8.5e-13 79.0 88 37.5
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 1.6e-11 74.7 57 68.4
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 1.1e-07 62.0 57 52.6
ECA234G3701 Erigeron canadensis HOM05D007339 ORTHO05D009302 3.4e-06 57.0 53 54.7


User provided reference genes

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