Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 1.2e-46 189.5 96 100.0
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 5.4e-39 164.1 93 84.9
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 3.5e-38 161.4 94 84.0
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 8.6e-37 156.8 90 85.6
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 2.2e-32 142.1 96 71.9
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 1.1e-31 139.8 96 69.8
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.4e-31 139.4 96 69.8
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 4.1e-31 137.9 96 68.8
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 2.0e-30 135.6 95 68.4
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.7e-30 135.2 96 67.7
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 6.0e-30 134.0 96 66.7
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 7.8e-30 133.7 96 68.8
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 2.3e-29 132.1 89 70.8
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 2.3e-29 132.1 96 65.6
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 3.0e-29 131.7 96 66.7
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 3.9e-29 131.3 96 64.6
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 3.9e-29 131.3 96 65.6
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 5.0e-29 131.0 96 65.6
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 6.6e-29 130.6 94 67.0
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 6.6e-29 130.6 96 65.6
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 8.6e-29 130.2 91 65.9
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 1.1e-28 129.8 96 63.5
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.1e-28 129.8 96 65.6
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.9e-28 129.0 88 70.5
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.9e-28 129.0 88 70.5
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.9e-28 129.0 88 70.5
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.9e-28 129.0 93 66.7
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.9e-28 129.0 93 66.7
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 2.5e-28 128.6 96 63.5
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 3.3e-28 128.3 93 65.6
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 4.3e-28 127.9 96 62.5
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 4.3e-28 127.9 96 64.6
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 5.6e-28 127.5 95 64.2
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 7.3e-28 127.1 88 69.3
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 7.3e-28 127.1 96 64.6
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 7.3e-28 127.1 96 63.5
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 9.5e-28 126.7 96 63.5
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 9.5e-28 126.7 89 68.5
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.2e-27 126.3 94 64.9
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 1.6e-27 125.9 89 68.5
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 1.6e-27 125.9 88 69.3
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 2.1e-27 125.6 89 66.3
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 2.1e-27 125.6 84 72.6
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 2.8e-27 125.2 96 63.5
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.8e-27 125.2 94 63.8
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 2.8e-27 125.2 94 63.8
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 2.8e-27 125.2 93 65.6
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 2.8e-27 125.2 96 62.5
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.6e-27 124.8 94 63.8
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 8.0e-27 123.6 89 66.3
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 8.0e-27 123.6 96 62.5
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 8.0e-27 123.6 96 62.5
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.4e-26 122.9 97 61.9
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 1.8e-26 122.5 89 66.3
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 4.0e-26 121.3 96 63.5
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 5.2e-26 120.9 94 58.5
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 5.2e-26 120.9 96 62.5
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 6.8e-26 120.6 84 66.7
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 6.8e-26 120.6 92 66.3
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 8.9e-26 120.2 84 66.7
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 1.2e-25 119.8 96 60.4
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 1.5e-25 119.4 88 64.8
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 1.5e-25 119.4 86 66.3
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 2.6e-25 118.6 94 57.4
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.6e-25 118.6 86 65.1
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 1.3e-24 116.3 87 63.2
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 1.3e-24 116.3 87 63.2
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 1.3e-24 116.3 93 58.1
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 1.7e-24 115.9 88 64.8
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.2e-24 115.5 93 57.0
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 3.7e-24 114.8 87 62.1
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 1.4e-23 112.8 84 61.9
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 4.1e-23 111.3 85 57.6
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 4.1e-23 111.3 88 60.2
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 6.0e-22 107.5 97 56.7
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 7.8e-22 107.1 93 54.8
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 1.7e-21 105.9 85 54.1
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 1.7e-21 105.9 97 53.6
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.7e-21 105.9 97 53.6
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.7e-21 105.9 97 53.6
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.3e-21 105.5 96 53.1
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 5.1e-21 104.4 69 73.9
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 8.6e-21 103.6 97 53.6
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.5e-20 102.8 75 61.3
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 3.3e-20 101.7 85 56.5
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 5.6e-20 100.9 82 57.3
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 5.6e-20 100.9 84 56.0
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 7.3e-20 100.5 90 52.2
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 9.5e-20 100.1 74 67.6
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 9.5e-20 100.1 88 55.7
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.6e-19 99.4 75 57.3
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 3.6e-19 98.2 92 52.2
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.4e-18 96.3 94 47.9
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 2.3e-18 95.5 94 46.8
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 2.3e-18 95.5 94 47.9
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 2.3e-18 95.5 94 46.8
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 2.3e-18 95.5 94 46.8
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 2.3e-18 95.5 94 46.8
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.3e-18 95.5 70 57.1
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 2.0e-17 92.4 89 50.6
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.6e-17 92.0 125 41.6
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 5.8e-17 90.9 68 60.3
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 1.3e-16 89.7 76 53.9
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 1.2e-14 83.2 67 64.2
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 6.6e-13 77.4 87 42.5
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.4e-10 69.7 97 40.2
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 1.2e-09 66.6 67 46.3
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 1.1e-07 60.1 50 56.0


User provided reference genes

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