Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 5.2e-142 507.7 254 100.0
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 3.5e-106 388.7 247 79.4
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 9.1e-94 347.4 248 71.0
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 2.0e-88 329.7 245 70.6
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 9.1e-86 320.9 241 66.8
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 2.0e-80 303.1 244 62.7
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 3.7e-79 298.9 245 62.0
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 1.1e-78 297.4 212 67.9
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 3.1e-78 295.8 243 60.1
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 3.1e-78 295.8 204 70.6
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 3.1e-78 295.8 199 70.4
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 4.1e-78 295.4 240 62.1
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 9.1e-78 294.3 221 65.6
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 9.1e-78 294.3 199 71.4
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.2e-77 293.9 201 70.1
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 1.2e-77 293.9 197 70.6
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 2.0e-77 293.1 202 67.3
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 2.0e-77 293.1 203 67.5
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 2.7e-77 292.7 206 67.5
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 4.5e-77 292.0 203 68.0
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 4.5e-77 292.0 214 64.0
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 7.7e-77 291.2 213 63.8
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 7.7e-77 291.2 198 70.2
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 1.7e-76 290.0 204 67.2
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 2.2e-76 289.7 199 68.8
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 2.2e-76 289.7 211 64.0
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.9e-76 289.3 213 62.4
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 3.8e-76 288.9 211 64.5
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 6.5e-76 288.1 198 68.7
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 6.5e-76 288.1 199 69.8
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.5e-75 287.0 238 60.5
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.5e-75 287.0 199 67.8
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 1.9e-75 286.6 211 63.5
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 2.5e-75 286.2 203 64.5
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 2.5e-75 286.2 199 68.3
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 4.2e-75 285.4 206 63.1
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 4.2e-75 285.4 237 61.2
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 5.5e-75 285.0 202 65.3
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 5.5e-75 285.0 205 65.4
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 5.5e-75 285.0 215 62.8
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 9.4e-75 284.3 196 65.8
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 9.4e-75 284.3 197 65.5
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 1.2e-74 283.9 202 64.9
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 1.2e-74 283.9 209 64.1
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.6e-74 283.5 200 66.5
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 2.1e-74 283.1 214 61.2
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 2.1e-74 283.1 200 66.5
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 2.1e-74 283.1 197 65.0
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 2.7e-74 282.7 196 66.8
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 6.1e-74 281.6 199 67.3
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 6.1e-74 281.6 196 66.3
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 8.0e-74 281.2 205 65.9
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 8.0e-74 281.2 199 66.3
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 2.3e-73 279.6 213 62.4
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 4.0e-73 278.9 190 67.4
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 6.8e-73 278.1 198 66.2
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 8.8e-73 277.7 199 64.8
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.2e-72 277.3 236 58.9
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 2.6e-72 276.2 206 64.6
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 3.4e-72 275.8 213 63.4
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 5.7e-72 275.0 199 66.8
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.3e-71 273.9 200 63.5
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 1.3e-71 273.9 204 63.7
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 2.2e-71 273.1 198 67.7
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 2.8e-71 272.7 199 64.3
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 2.8e-71 272.7 198 64.1
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 3.7e-71 272.3 236 58.5
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 4.8e-71 271.9 196 65.3
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 8.3e-71 271.2 228 59.2
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 1.1e-70 270.8 199 63.3
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 1.1e-70 270.8 199 63.3
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 1.8e-70 270.0 199 62.8
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.4e-70 269.6 204 60.3
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 3.1e-70 269.2 180 71.7
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.2e-69 267.3 204 61.3
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.2e-69 267.3 200 63.5
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 1.6e-69 266.9 199 62.3
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 1.6e-69 266.9 205 62.4
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 2.0e-69 266.5 199 62.8
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 3.5e-69 265.8 200 62.0
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 4.5e-69 265.4 223 60.1
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 7.7e-69 264.6 198 62.1
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.0e-68 264.2 200 62.5
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 1.7e-68 263.5 200 61.5
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.9e-68 262.7 221 60.2
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 2.9e-68 262.7 196 62.2
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 2.9e-68 262.7 186 66.7
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 7.2e-67 258.1 202 60.9
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 2.7e-66 256.1 285 49.5
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 4.0e-65 252.3 238 53.4
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 8.8e-65 251.1 232 56.5
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.5e-64 250.4 178 67.4
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 7.5e-64 248.1 215 56.7
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 7.0e-62 241.5 198 56.1
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 8.6e-60 234.6 200 55.0
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.2e-58 230.7 174 64.9
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 8.0e-58 228.0 174 64.9
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 1.8e-54 216.9 157 63.7
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.3e-52 209.9 137 70.1
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.6e-50 203.8 133 70.7
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 1.8e-49 200.3 204 44.6
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.0e-44 184.5 179 54.2
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 1.1e-43 181.0 120 68.3
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.5e-43 180.6 133 61.7
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.8e-41 173.7 110 72.7
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.1e-41 172.9 115 72.2
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.3e-36 156.8 112 66.1
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 2.3e-33 146.7 126 59.5
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.3e-31 141.0 87 75.9
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 2.4e-30 136.7 106 62.3
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 1.2e-29 134.4 78 88.5
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.5e-27 126.7 89 66.3
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 2.8e-26 123.2 91 67.0
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 4.7e-26 122.5 94 67.0
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 8.1e-26 121.7 84 70.2
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 2.7e-21 106.7 82 63.4
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.7e-20 104.0 161 41.6
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 5.1e-20 102.4 88 53.4
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 1.5e-19 100.9 70 67.1
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 1.9e-19 100.5 112 45.5
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 8.1e-18 95.1 78 53.8
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.6e-13 80.9 67 56.7
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 3.9e-12 76.3 67 53.7
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 2.0e-08 63.9 52 55.8


User provided reference genes

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