Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 1.4e-85 319.7 178 100.0
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 2.8e-49 199.1 190 66.8
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 9.7e-34 147.5 115 62.6
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 2.4e-32 142.9 111 59.5
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 2.4e-32 142.9 132 50.8
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 5.3e-32 141.7 104 67.3
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 1.2e-31 140.6 96 67.7
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 1.2e-31 140.6 175 57.7
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 2.0e-31 139.8 179 48.0
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 2.6e-31 139.4 177 47.5
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 3.4e-31 139.0 108 64.8
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 5.9e-31 138.3 176 47.2
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 1.0e-30 137.5 104 65.4
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 1.0e-30 137.5 72 77.8
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 1.3e-30 137.1 69 85.5
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 1.3e-30 137.1 111 60.4
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 1.7e-30 136.7 86 73.3
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 1.7e-30 136.7 69 81.2
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 1.7e-30 136.7 114 59.6
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 2.2e-30 136.3 132 51.5
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 5.0e-30 135.2 102 64.7
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 6.5e-30 134.8 79 73.4
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 1.1e-29 134.0 177 48.0
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 1.1e-29 134.0 112 61.6
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 1.4e-29 133.7 107 60.7
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 1.9e-29 133.3 98 65.3
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 2.5e-29 132.9 104 63.5
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 3.2e-29 132.5 126 55.6
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 4.2e-29 132.1 92 69.6
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 4.2e-29 132.1 94 68.1
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 4.2e-29 132.1 109 56.9
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 5.5e-29 131.7 68 83.8
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 5.5e-29 131.7 132 59.8
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 5.5e-29 131.7 73 80.8
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 5.5e-29 131.7 87 69.0
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 5.5e-29 131.7 76 71.1
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 7.2e-29 131.3 103 64.1
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 9.3e-29 131.0 101 66.3
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 9.3e-29 131.0 62 90.3
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 9.3e-29 131.0 132 59.8
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 9.3e-29 131.0 173 44.5
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 1.6e-28 130.2 69 81.2
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 2.1e-28 129.8 132 59.8
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 2.1e-28 129.8 132 59.8
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 2.1e-28 129.8 102 63.7
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 2.7e-28 129.4 62 88.7
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 2.7e-28 129.4 75 74.7
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 2.7e-28 129.4 116 70.7
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 3.6e-28 129.0 97 67.0
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 3.6e-28 129.0 86 69.8
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 4.6e-28 128.6 68 82.4
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 4.6e-28 128.6 99 65.7
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 4.6e-28 128.6 172 45.3
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 4.6e-28 128.6 69 79.7
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 6.1e-28 128.3 176 44.9
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 6.1e-28 128.3 155 43.9
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 7.9e-28 127.9 91 67.0
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 1.0e-27 127.5 76 71.1
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 1.0e-27 127.5 103 61.2
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 1.3e-27 127.1 105 59.0
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 1.3e-27 127.1 65 83.1
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 1.3e-27 127.1 101 62.4
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 1.8e-27 126.7 92 66.3
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 1.8e-27 126.7 103 60.2
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 3.0e-27 125.9 104 61.5
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 3.0e-27 125.9 85 68.2
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 3.9e-27 125.6 102 59.8
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 3.9e-27 125.6 64 81.2
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 5.1e-27 125.2 98 61.2
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 5.1e-27 125.2 75 72.0
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 5.1e-27 125.2 75 72.0
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 5.1e-27 125.2 71 76.1
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 5.1e-27 125.2 103 60.2
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 6.7e-27 124.8 75 72.0
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 6.7e-27 124.8 75 72.0
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 6.7e-27 124.8 75 72.0
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 8.8e-27 124.4 75 72.0
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 8.8e-27 124.4 99 60.6
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 8.8e-27 124.4 99 60.6
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 8.8e-27 124.4 73 75.3
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 8.8e-27 124.4 64 84.4
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 8.8e-27 124.4 94 66.0
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 1.1e-26 124.0 63 82.5
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 1.5e-26 123.6 90 67.8
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 1.5e-26 123.6 75 72.0
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 2.5e-26 122.9 72 75.0
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 3.3e-26 122.5 62 85.5
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 3.3e-26 122.5 62 85.5
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 3.3e-26 122.5 68 77.9
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 3.3e-26 122.5 106 57.5
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 5.7e-26 121.7 76 68.4
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 7.4e-26 121.3 83 71.1
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 9.7e-26 120.9 166 46.4
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 9.7e-26 120.9 62 80.6
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 2.2e-25 119.8 65 78.5
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 2.8e-25 119.4 78 67.9
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 4.8e-25 118.6 104 59.6
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 1.1e-24 117.5 62 83.9
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 4.1e-24 115.5 66 74.2
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 4.1e-24 115.5 66 74.2
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 5.3e-24 115.2 61 80.3
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 2.2e-22 109.8 83 60.2
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 8.5e-22 107.8 76 61.8
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 3.2e-21 105.9 87 59.8
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 3.8e-14 82.4 62 53.2
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 1.1e-13 80.9 78 47.4
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 2.4e-08 63.2 59 45.8


User provided reference genes

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