Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 1.5e-125 453.0 254 100.0
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 1.6e-69 266.9 235 60.9
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 1.1e-59 234.2 247 53.8
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 5.7e-56 221.9 202 61.9
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 2.0e-53 213.4 235 50.6
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 4.4e-48 195.7 236 48.7
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 4.4e-48 195.7 241 47.7
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 4.4e-48 195.7 208 54.3
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 7.5e-48 194.9 212 52.8
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 1.3e-47 194.1 212 52.8
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 2.9e-47 193.0 131 68.7
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 2.9e-47 193.0 221 52.5
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 2.9e-47 193.0 252 47.6
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 4.9e-47 192.2 147 63.3
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 6.4e-47 191.8 174 58.0
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 6.4e-47 191.8 186 55.4
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 6.4e-47 191.8 205 54.1
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.1e-46 191.0 255 47.1
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 1.1e-46 191.0 198 55.1
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.1e-46 191.0 186 52.7
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 1.1e-46 191.0 166 57.8
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.4e-46 190.7 209 50.2
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 1.4e-46 190.7 216 50.0
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.9e-46 190.3 227 49.8
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 2.4e-46 189.9 136 66.9
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 4.1e-46 189.1 208 51.4
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 4.1e-46 189.1 170 58.8
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 5.4e-46 188.7 162 58.6
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 9.2e-46 188.0 211 49.8
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 1.2e-45 187.6 176 55.1
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 2.0e-45 186.8 197 52.8
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 3.5e-45 186.0 169 57.4
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 3.5e-45 186.0 218 48.6
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 4.6e-45 185.7 162 58.0
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 6.0e-45 185.3 204 52.0
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 7.8e-45 184.9 178 52.8
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 1.0e-44 184.5 193 49.7
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 1.0e-44 184.5 186 55.4
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 1.3e-44 184.1 183 53.6
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 3.0e-44 183.0 156 57.1
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 3.9e-44 182.6 207 50.2
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 6.6e-44 181.8 211 49.8
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 6.6e-44 181.8 178 53.9
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 1.1e-43 181.0 145 62.8
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 1.5e-43 180.6 218 46.8
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 1.5e-43 180.6 151 60.3
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 2.5e-43 179.9 182 53.3
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 2.5e-43 179.9 171 55.6
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 3.3e-43 179.5 219 47.5
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 7.3e-43 178.3 201 50.2
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 9.5e-43 177.9 157 59.2
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 9.5e-43 177.9 184 51.6
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 9.5e-43 177.9 184 51.6
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 1.2e-42 177.6 178 52.8
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 1.2e-42 177.6 196 52.0
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 1.6e-42 177.2 161 58.4
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 2.8e-42 176.4 194 52.1
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 3.6e-42 176.0 209 45.9
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 4.7e-42 175.6 213 48.8
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 4.7e-42 175.6 135 64.4
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 8.1e-42 174.9 199 50.8
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.4e-41 174.1 169 53.3
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 2.3e-41 173.3 234 45.3
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 4.0e-41 172.6 239 44.8
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 5.2e-41 172.2 210 49.0
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 1.2e-40 171.0 177 52.0
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 1.2e-40 171.0 168 54.2
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 1.2e-40 171.0 239 44.4
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 1.2e-40 171.0 207 48.8
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 4.4e-40 169.1 139 56.8
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 5.8e-40 168.7 192 46.9
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 5.8e-40 168.7 172 52.9
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 7.5e-40 168.3 188 48.9
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 7.5e-40 168.3 159 52.8
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 7.5e-40 168.3 228 45.6
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 9.8e-40 167.9 159 54.1
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 1.3e-39 167.5 176 52.3
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 1.3e-39 167.5 158 53.2
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 2.2e-39 166.8 202 46.5
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 2.2e-39 166.8 153 55.6
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 3.7e-39 166.0 162 51.9
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 4.9e-39 165.6 164 53.7
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 6.4e-39 165.2 161 54.0
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 1.1e-38 164.5 203 46.3
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 1.1e-38 164.5 130 60.0
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 1.9e-38 163.7 160 50.6
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 2.4e-38 163.3 196 47.4
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 3.2e-38 162.9 158 53.8
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 3.2e-38 162.9 155 52.3
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 5.4e-38 162.2 149 53.7
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 5.4e-38 162.2 162 52.5
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 9.2e-38 161.4 155 51.0
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 9.2e-38 161.4 155 51.0
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 4.6e-37 159.1 276 39.9
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 1.0e-36 157.9 133 57.9
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 1.3e-36 157.5 231 44.6
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.3e-36 157.5 150 55.3
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 3.9e-36 156.0 174 49.4
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 5.6e-35 152.1 190 46.3
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 5.6e-35 152.1 182 48.4
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 8.1e-34 148.3 136 53.7
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.4e-33 147.5 135 57.0
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 4.0e-33 146.0 206 44.2
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.5e-32 144.1 198 42.9
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 1.3e-31 141.0 146 50.0
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 2.9e-31 139.8 173 46.8
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.1e-30 137.9 210 42.9
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.2e-29 134.4 153 48.4
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 7.8e-29 131.7 115 54.8
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 1.3e-28 131.0 165 43.6
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 1.7e-28 130.6 124 54.0
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 5.1e-28 129.0 87 65.5
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 2.1e-26 123.6 94 61.7
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 8.1e-26 121.7 157 42.0
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 1.8e-25 120.6 83 66.3
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 8.9e-25 118.2 141 48.9
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.0e-24 117.1 194 41.8
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.4e-22 110.9 85 65.9
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 3.6e-18 96.3 116 47.4
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 9.9e-16 88.2 162 36.4
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 2.2e-15 87.0 209 34.0
PSO675G1839 Papaver somniferum HOM05D000047 ORTHO05D000044 2.6e-08 63.5 70 47.1
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 1.3e-07 61.2 85 45.9
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 2.9e-07 60.1 57 56.1


User provided reference genes

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