Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 2.9e-119 433.7 222 100.0
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 9.5e-78 295.8 223 73.1
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 4.3e-30 137.5 148 50.7
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 1.6e-29 135.6 191 44.0
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 1.8e-28 132.1 183 44.3
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 1.5e-27 129.0 195 40.0
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 2.6e-27 128.3 201 40.3
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 3.4e-27 127.9 132 46.2
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 1.3e-26 125.9 217 37.8
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 4.9e-26 124.0 192 37.5
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 4.9e-26 124.0 135 46.7
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 3.2e-25 121.3 151 43.7
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 7.1e-25 120.2 183 41.0
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 2.1e-24 118.6 134 49.3
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 4.6e-24 117.5 179 38.5
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 2.3e-23 115.2 239 34.7
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 2.3e-23 115.2 150 41.3
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 2.3e-23 115.2 148 43.9
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 3.0e-23 114.8 148 43.2
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 6.7e-23 113.6 122 51.6
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 8.7e-23 113.2 196 39.3
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 1.1e-22 112.8 148 41.9
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 1.5e-22 112.5 145 43.4
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.9e-22 112.1 148 42.6
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 3.3e-22 111.3 150 41.3
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 4.3e-22 110.9 155 42.6
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 5.6e-22 110.5 149 41.6
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 9.6e-22 109.8 128 46.1
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.6e-21 109.0 150 42.0
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.7e-21 107.8 150 41.3
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 3.1e-20 104.8 177 38.4
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 4.0e-20 104.4 166 39.8
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 1.5e-19 102.4 166 38.6
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 2.6e-19 101.7 128 43.0
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 5.8e-19 100.5 147 43.5
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 9.9e-19 99.8 174 38.5
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 2.9e-18 98.2 128 41.4
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 8.4e-18 96.7 195 34.9
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 8.4e-18 96.7 169 35.5
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 1.9e-17 95.5 163 36.8
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 2.4e-17 95.1 166 34.9
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 5.5e-17 94.0 125 45.6
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 1.2e-16 92.8 176 37.5
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 2.1e-16 92.0 160 33.1
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 2.7e-16 91.7 193 35.8
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 4.6e-16 90.9 157 35.7
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 6.0e-16 90.5 132 38.6
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 1.8e-15 89.0 159 34.0
ECA233G1087 Erigeron canadensis HOM05D001398 ORTHO05D001467 2.3e-15 88.6 58 65.5
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 6.7e-15 87.0 195 32.3
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 8.7e-15 86.7 180 31.1
Actinidia39878 Actinidia chinensis HOM05D007410 ORTHO05D009500 2.5e-14 85.1 59 67.8
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 2.5e-14 85.1 129 36.4
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 3.3e-14 84.7 140 37.1
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 3.3e-14 84.7 174 36.8
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 4.3e-14 84.3 123 40.7
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 5.6e-14 84.0 149 32.9
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 5.6e-14 84.0 172 31.4
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 5.6e-14 84.0 118 40.7
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 1.3e-13 82.8 188 32.4
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 2.1e-13 82.0 160 33.8
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 2.1e-13 82.0 188 31.9
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 2.1e-13 82.0 172 34.3
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 6.2e-13 80.5 155 35.5
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 6.2e-13 80.5 178 30.9
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 6.2e-13 80.5 158 33.5
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 1.8e-12 79.0 92 46.7
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.8e-12 79.0 147 37.4
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 6.9e-12 77.0 142 33.8
HanXRQChr02g0058171 Helianthus annuus HOM05D007410 ORTHO05D009500 6.9e-12 77.0 40 85.0
AL6G44470 Arabidopsis lyrata HOM05D007410 ORTHO05D009500 2.6e-11 75.1 116 36.2
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 3.4e-11 74.7 165 32.7
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 4.5e-11 74.3 164 34.8
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 3.8e-10 71.2 156 28.8
Thhalv10015810m.g Eutrema salsugineum HOM05D007410 ORTHO05D009500 4.2e-09 67.8 93 35.5
TPR.G28359 Trifolium pratense HOM05D007410 ORTHO05D009500 4.2e-09 67.8 169 31.4
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 7.1e-09 67.0 99 39.4
Ah.05g174660 Amaranthus hybridus HOM05D007410 ORTHO05D009500 1.2e-08 66.2 60 48.3
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 1.6e-08 65.9 95 41.1
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 2.7e-08 65.1 92 41.3
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 2.7e-08 65.1 114 34.2
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 6.0e-08 63.9 56 57.1
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 7.9e-08 63.5 118 35.6
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 1.0e-07 63.2 150 34.7
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 1.3e-07 62.8 128 28.9
Thecc.05G080100 Theobroma cacao HOM05D007410 ORTHO05D009500 1.3e-07 62.8 56 57.1
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 1.1e-06 59.7 164 31.1
C05p07190 Brassica napus HOM05D000001 ORTHO05D004269 2.5e-06 58.5 166 24.7
BolC5t29473H Brassica oleracea HOM05D000001 ORTHO05D004269 2.5e-06 58.5 166 24.7
AL1G19660 Arabidopsis lyrata HOM05D000001 ORTHO05D004269 3.3e-06 58.2 166 24.7
Ca_26941_v3 Cicer arietinum L. HOM05D008100 ORTHO05D009715 3.3e-06 58.2 110 27.3
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 3.3e-06 58.2 97 35.1
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 4.3e-06 57.8 163 31.3
HanXRQChr14g0435491 Helianthus annuus HOM05D000162 ORTHO05D000090 4.3e-06 57.8 133 24.1
Solyc05g012920.3 Solanum lycopersicum HOM05D004824 ORTHO05D003903 4.3e-06 57.8 129 27.9
Migut.N01749 Erythranthe guttata HOM05D000001 ORTHO05D009896 5.7e-06 57.4 187 27.8
Thhalv10009682m.g Eutrema salsugineum HOM05D000001 ORTHO05D004269 7.4e-06 57.0 186 24.7
Zm00001eb178770 Zea mays HOM05D022935 ORTHO05D020958 7.4e-06 57.0 110 33.6
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 9.7e-06 56.6 114 30.7
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 9.7e-06 56.6 114 30.7
THA.LOC104798434 Tarenaya hassleriana HOM05D000001 ORTHO05D000003 9.7e-06 56.6 113 31.9


User provided reference genes

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