Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 7.4e-90 334.0 180 100.0
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 1.0e-54 217.2 193 65.8
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 7.0e-48 194.5 173 64.7
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 4.4e-34 148.7 128 63.3
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 1.7e-33 146.7 116 68.1
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 2.2e-33 146.4 128 61.7
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 2.8e-33 146.0 131 63.4
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 4.8e-33 145.2 136 56.6
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 8.3e-33 144.4 143 55.2
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.1e-32 144.1 141 56.0
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.1e-32 144.1 117 65.0
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.1e-32 142.5 116 65.5
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 4.1e-32 142.1 115 61.7
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 7.0e-32 141.4 116 62.9
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 9.1e-32 141.0 116 63.8
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 9.1e-32 141.0 131 61.8
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.0e-30 137.5 116 62.9
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.7e-30 136.7 116 62.1
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.7e-30 136.7 116 62.1
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.7e-30 136.7 116 62.1
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.7e-30 136.7 116 62.1
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.7e-30 136.7 152 53.3
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 2.3e-30 136.3 132 55.3
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.8e-30 135.6 116 62.1
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 1.5e-29 133.7 130 53.8
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 1.9e-29 133.3 134 53.0
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 3.2e-29 132.5 140 55.0
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 5.5e-29 131.7 130 53.1
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 5.5e-29 131.7 111 61.3
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 5.5e-29 131.7 130 56.9
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 9.5e-29 131.0 115 58.3
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 9.5e-29 131.0 116 59.5
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 9.5e-29 131.0 154 50.6
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 1.2e-28 130.6 114 60.5
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 1.6e-28 130.2 127 55.1
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 2.1e-28 129.8 111 63.1
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 2.8e-28 129.4 130 51.5
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 4.7e-28 128.6 130 51.5
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 4.7e-28 128.6 114 56.1
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 6.1e-28 128.3 123 54.5
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 6.1e-28 128.3 123 54.5
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 6.1e-28 128.3 123 54.5
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 1.4e-27 127.1 116 56.0
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 1.8e-27 126.7 115 57.4
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 2.3e-27 126.3 123 52.8
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 3.0e-27 125.9 123 53.7
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 4.0e-27 125.6 130 51.5
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.2e-26 124.0 110 58.2
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 1.5e-26 123.6 128 51.6
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 1.5e-26 123.6 110 58.2
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.5e-26 123.6 136 50.7
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 9.8e-26 120.9 180 43.3
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.7e-25 119.0 177 43.5
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 1.1e-24 117.5 117 56.4
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 3.1e-24 115.9 98 61.2
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 9.2e-24 114.4 116 56.0
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.6e-23 113.6 116 56.0
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 3.8e-22 109.0 91 63.7
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 5.0e-22 108.6 108 54.6
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 5.0e-22 108.6 105 52.4
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 6.6e-22 108.2 116 51.7
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 1.9e-21 106.7 156 42.9
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 1.4e-19 100.5 173 38.7
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 1.4e-19 100.5 173 38.7
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 1.1e-16 90.9 83 56.6
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 1.3e-14 84.0 66 66.7
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 4.3e-13 79.0 100 44.0
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 7.3e-13 78.2 55 70.9
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.9e-09 66.2 63 57.1
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 2.9e-09 66.2 121 39.7
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 1.4e-08 63.9 82 46.3
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 2.0e-07 60.1 82 50.0


User provided reference genes

Program Settings