Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 0.0e+00 1254.2 649 100.0
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 2.1e-211 739.6 666 65.6
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 2.6e-209 732.6 666 64.9
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 4.4e-100 369.8 699 40.5
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 5.3e-98 362.8 700 40.7
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 2.6e-92 344.0 709 38.4
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 5.9e-89 332.8 624 40.4
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 8.0e-86 322.4 259 66.4
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 4.8e-83 313.2 712 37.8
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 1.0e-80 305.4 698 37.0
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 2.1e-78 297.7 692 36.8
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.4e-77 295.0 645 36.4
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 1.4e-77 295.0 695 35.3
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 4.4e-76 290.0 651 37.2
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 4.1e-74 283.5 694 36.6
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.3e-72 278.5 583 38.8
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 2.5e-71 274.2 710 35.5
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 3.6e-70 270.4 580 36.9
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 4.7e-70 270.0 698 34.1
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 6.1e-70 269.6 689 34.4
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 8.0e-70 269.2 603 37.6
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 3.4e-68 263.8 679 34.3
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 7.5e-68 262.7 579 36.3
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 2.9e-67 260.8 607 35.3
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 3.2e-66 257.3 588 36.4
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 3.2e-66 257.3 607 35.1
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 3.2e-66 257.3 687 34.8
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 1.2e-65 255.4 601 37.3
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 5.9e-65 253.1 701 33.4
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.7e-64 251.5 676 33.4
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.3e-64 251.1 647 33.8
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 3.3e-63 247.3 693 34.3
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 3.3e-63 247.3 587 37.0
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 9.5e-63 245.7 534 35.2
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 6.2e-62 243.0 620 35.5
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 6.2e-62 243.0 587 36.6
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.0e-61 242.3 583 35.5
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.8e-61 241.5 712 31.9
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 8.9e-61 239.2 548 35.2
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.6e-60 237.7 701 32.1
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.4e-60 237.3 705 32.8
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 3.4e-60 237.3 706 33.0
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 3.4e-60 237.3 699 31.5
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 1.3e-59 235.3 632 34.0
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 2.4e-58 231.1 693 31.2
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 3.2e-58 230.7 654 34.3
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 4.1e-58 230.3 589 34.6
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 5.4e-58 229.9 534 35.8
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 1.6e-57 228.4 643 34.8
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 2.0e-57 228.0 693 32.5
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 1.0e-56 225.7 589 33.4
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.7e-56 224.9 704 32.5
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 3.9e-56 223.8 569 33.7
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 6.6e-56 223.0 707 32.4
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 6.6e-56 223.0 662 31.9
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 8.6e-56 222.6 638 32.8
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.5e-55 221.9 646 31.9
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 1.9e-55 221.5 702 31.5
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 1.6e-54 218.4 714 32.1
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 1.6e-54 218.4 547 35.5
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 2.1e-54 218.0 667 30.9
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 8.1e-54 216.1 711 32.1
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 3.1e-53 214.2 709 30.9
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 4.0e-53 213.8 697 32.3
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 4.0e-53 213.8 688 31.1
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 4.0e-53 213.8 692 30.6
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 8.9e-53 212.6 690 31.6
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.2e-52 212.2 763 30.9
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 3.4e-52 210.7 599 31.7
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 7.5e-52 209.5 732 31.3
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 1.3e-51 208.8 700 31.3
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 1.1e-50 205.7 583 32.4
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 1.4e-50 205.3 615 31.4
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 9.2e-50 202.6 665 32.3
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 1.7e-48 198.4 600 33.8
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 6.6e-48 196.4 574 31.2
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 6.6e-48 196.4 715 30.9
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 6.6e-48 196.4 668 32.3
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 8.6e-48 196.1 620 30.6
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 7.3e-47 193.0 684 30.8
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.2e-46 192.2 660 31.2
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 1.6e-46 191.8 622 33.0
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 2.8e-46 191.0 602 31.1
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 2.8e-46 191.0 728 31.6
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 1.1e-45 189.1 630 29.7
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 1.8e-45 188.3 658 30.7
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 6.8e-45 186.4 590 30.7
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 6.8e-45 186.4 642 30.7
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 5.8e-44 183.3 700 31.3
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 9.9e-44 182.6 625 30.7
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 9.9e-44 182.6 668 29.6
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 1.3e-43 182.2 587 30.2
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 2.9e-43 181.0 597 31.3
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 7.1e-42 176.4 586 29.9
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 1.2e-41 175.6 587 30.8
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 4.6e-41 173.7 555 30.6
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 2.3e-40 171.4 554 31.0
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 6.6e-40 169.9 450 34.0
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 8.6e-40 169.5 554 31.2
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 2.5e-39 167.9 422 35.5
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 4.3e-39 167.2 554 31.0
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 9.6e-39 166.0 567 32.3
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 2.8e-38 164.5 734 31.2
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 2.8e-38 164.5 678 29.1
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 1.4e-37 162.2 566 31.8
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 1.4e-37 162.2 524 31.5
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.8e-36 156.8 437 31.8
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 1.7e-35 155.2 555 30.8
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.1e-34 152.5 432 32.4
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 4.2e-34 150.6 367 35.7
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 4.6e-33 147.1 367 33.0
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 1.5e-31 142.1 369 32.5
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 7.9e-25 119.8 443 30.0
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 1.5e-23 115.5 280 32.9
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 2.0e-20 105.1 487 27.9
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 6.4e-19 100.1 430 26.0
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 3.5e-17 94.4 465 26.0
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 3.1e-13 81.3 203 36.0
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 6.0e-09 67.0 457 25.8
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 7.9e-09 66.6 305 28.9
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.8e-08 65.5 155 35.5


User provided reference genes

Program Settings