Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 1.8e-90 335.9 170 100.0
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 8.8e-61 237.3 176 72.2
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 1.2e-60 236.9 174 74.1
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 7.0e-50 201.1 166 64.5
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 7.8e-49 197.6 144 70.8
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 1.3e-48 196.8 144 69.4
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.7e-48 196.4 150 69.3
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 2.3e-48 196.1 131 73.3
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.0e-48 195.7 150 69.3
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 1.1e-47 193.7 117 82.1
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.1e-47 193.7 116 79.3
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.1e-47 193.7 116 78.4
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 1.5e-47 193.4 116 78.4
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 7.3e-47 191.0 178 59.6
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 9.5e-47 190.7 147 67.3
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 9.5e-47 190.7 116 78.4
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 2.8e-46 189.1 128 73.4
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 3.6e-46 188.7 174 57.5
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 8.0e-46 187.6 157 64.3
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 1.0e-45 187.2 130 71.5
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.0e-45 187.2 181 59.1
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 1.8e-45 186.4 135 68.9
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 2.3e-45 186.0 131 71.8
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 2.3e-45 186.0 145 64.8
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 3.1e-45 185.7 142 65.5
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 5.2e-45 184.9 131 67.9
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 5.2e-45 184.9 128 71.9
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 6.8e-45 184.5 134 69.4
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 6.8e-45 184.5 120 74.2
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 8.9e-45 184.1 149 66.4
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 1.2e-44 183.7 115 75.7
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 1.2e-44 183.7 126 71.4
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 1.2e-44 183.7 125 70.4
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.2e-44 183.7 121 71.9
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 1.5e-44 183.3 166 58.4
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 3.4e-44 182.2 108 80.6
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 3.4e-44 182.2 142 62.7
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 4.4e-44 181.8 131 69.5
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 5.8e-44 181.4 126 70.6
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 7.5e-44 181.0 126 71.4
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 7.5e-44 181.0 152 63.8
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 9.8e-44 180.6 137 63.5
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 9.8e-44 180.6 139 64.7
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 9.8e-44 180.6 112 75.0
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 9.8e-44 180.6 140 65.7
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 9.8e-44 180.6 144 61.1
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 9.8e-44 180.6 124 70.2
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 1.3e-43 180.3 145 63.4
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 1.3e-43 180.3 142 64.8
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 1.3e-43 180.3 122 71.3
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 2.2e-43 179.5 133 64.7
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 2.2e-43 179.5 112 74.1
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 2.2e-43 179.5 178 58.4
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 2.9e-43 179.1 112 74.1
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.9e-43 179.1 135 65.2
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 3.7e-43 178.7 127 70.9
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 1.1e-42 177.2 126 68.3
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 2.4e-42 176.0 125 67.2
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 3.2e-42 175.6 133 66.2
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 3.2e-42 175.6 176 56.8
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 4.1e-42 175.3 174 56.9
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 7.0e-42 174.5 134 66.4
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 7.0e-42 174.5 134 66.4
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 7.0e-42 174.5 134 66.4
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 7.0e-42 174.5 109 74.3
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 9.2e-42 174.1 136 66.9
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 9.2e-42 174.1 136 66.9
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 9.2e-42 174.1 120 71.7
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 1.2e-41 173.7 135 63.0
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 1.6e-41 173.3 137 62.8
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 1.6e-41 173.3 140 60.7
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 2.0e-41 172.9 149 60.4
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 2.7e-41 172.6 132 67.4
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 2.7e-41 172.6 130 66.9
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 6.0e-41 171.4 128 66.4
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 6.0e-41 171.4 132 66.7
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 6.0e-41 171.4 132 66.7
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 6.0e-41 171.4 137 62.0
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 7.8e-41 171.0 120 67.5
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 1.0e-40 170.6 132 66.7
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 1.7e-40 169.9 115 72.2
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 1.7e-40 169.9 130 65.4
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 2.3e-40 169.5 128 65.6
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 3.0e-40 169.1 143 60.8
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 6.6e-40 167.9 114 73.7
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 6.6e-40 167.9 114 73.7
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 2.5e-39 166.0 113 67.3
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 4.3e-39 165.2 128 64.1
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 4.3e-39 165.2 130 63.8
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 5.6e-39 164.9 107 74.8
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 9.5e-39 164.1 143 58.0
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.2e-38 163.7 143 58.0
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.2e-38 163.7 143 58.0
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 1.6e-38 163.3 142 57.7
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.6e-38 163.3 143 58.0
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.6e-38 163.3 143 58.0
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 2.1e-38 162.9 134 63.4
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 6.2e-38 161.4 148 58.8
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 6.8e-37 157.9 120 66.7
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 1.5e-36 156.8 114 63.2
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 5.8e-36 154.8 122 62.3
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 7.5e-36 154.5 102 71.6
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 5.4e-34 148.3 156 54.5
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 1.6e-33 146.7 112 64.3
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 3.5e-33 145.6 122 60.7
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 1.3e-32 143.7 152 57.9
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 1.3e-32 143.7 87 73.6
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.7e-32 143.3 109 58.7
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 1.1e-31 140.6 157 54.1
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 5.6e-31 138.3 114 59.6
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 5.6e-31 138.3 125 60.0
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 2.8e-30 136.0 102 64.7
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 2.8e-30 136.0 113 57.5
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 6.2e-30 134.8 111 57.7
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 5.2e-29 131.7 103 65.0
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 1.2e-28 130.6 123 56.9
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 2.2e-27 126.3 120 59.2
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 4.1e-26 122.1 116 48.3
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 6.4e-19 98.2 114 46.5
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.1e-14 83.2 49 81.6
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 2.8e-14 82.8 98 45.9
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 1.2e-12 77.4 61 72.1
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.4e-10 69.7 61 55.7
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 5.6e-07 58.5 81 43.2
Manes.01G158400 Manihot esculenta HOM05D006312 ORTHO05D007843 6.2e-06 55.1 63 50.8


User provided reference genes

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