Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.9e-106 388.7 207 100.0
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 4.2e-81 305.1 197 85.8
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 1.3e-74 283.5 195 83.1
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.5e-73 279.3 212 74.1
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.0e-71 273.9 195 77.4
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 1.8e-71 273.1 209 72.2
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 2.3e-71 272.7 210 72.4
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 5.7e-70 268.1 197 76.1
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.3e-69 266.9 211 70.6
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 2.2e-69 266.2 177 78.0
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 3.7e-69 265.4 208 70.2
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 3.7e-69 265.4 194 73.7
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 4.8e-69 265.0 217 70.0
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 6.3e-69 264.6 215 70.2
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 8.2e-69 264.2 203 72.9
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 8.2e-69 264.2 203 72.9
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.4e-68 263.5 212 68.9
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 1.8e-68 263.1 201 70.1
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.8e-68 263.1 211 70.1
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 5.3e-68 261.5 151 86.8
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 9.1e-68 260.8 212 70.3
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 1.6e-67 260.0 198 72.2
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 3.5e-67 258.8 211 70.1
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 4.5e-67 258.5 177 75.7
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 5.9e-67 258.1 158 82.3
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 5.9e-67 258.1 158 82.3
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 7.7e-67 257.7 215 67.4
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.0e-66 257.3 155 81.9
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.3e-66 256.9 155 81.3
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.3e-66 256.9 150 86.7
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.2e-66 256.1 215 67.4
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 2.2e-66 256.1 221 66.5
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 6.5e-66 254.6 210 67.6
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.1e-65 253.8 185 75.7
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.5e-65 253.4 186 72.0
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 2.5e-65 252.7 207 66.2
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.5e-65 252.7 195 70.3
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 7.2e-65 251.1 212 67.5
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 7.2e-65 251.1 219 68.9
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.2e-64 250.4 212 69.3
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.6e-64 250.0 215 67.0
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 6.1e-64 248.1 152 80.9
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.1e-64 248.1 134 89.6
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.0e-63 247.3 212 67.0
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.8e-63 246.5 195 66.7
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.8e-63 246.5 178 70.8
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 2.3e-63 246.1 221 63.8
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.3e-63 246.1 191 68.1
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 3.0e-63 245.7 213 67.6
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 4.0e-63 245.4 212 64.2
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 4.0e-63 245.4 209 63.6
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 5.2e-63 245.0 177 71.8
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 6.7e-63 244.6 211 65.9
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 6.7e-63 244.6 208 65.9
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.2e-62 243.8 212 66.0
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 1.2e-62 243.8 209 64.1
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.5e-62 243.4 145 81.4
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.5e-62 243.4 211 66.4
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.3e-62 242.3 198 68.2
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 4.4e-62 241.9 218 64.2
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 4.4e-62 241.9 191 67.5
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 5.7e-62 241.5 195 66.7
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.7e-61 240.0 199 68.3
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.7e-61 240.0 147 79.6
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 2.8e-61 239.2 170 78.2
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 6.3e-61 238.0 233 60.9
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 6.3e-61 238.0 206 65.5
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 6.3e-61 238.0 216 63.9
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 6.3e-61 238.0 214 61.7
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 8.2e-61 237.7 150 81.3
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 8.2e-61 237.7 204 62.7
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.4e-60 236.9 208 63.9
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 4.1e-60 235.3 130 89.2
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 7.0e-60 234.6 198 64.1
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 3.5e-59 232.3 137 81.0
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.5e-59 231.9 201 67.2
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 4.5e-59 231.9 207 61.4
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 4.5e-59 231.9 186 65.6
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 5.9e-59 231.5 141 79.4
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 5.0e-58 228.4 187 65.2
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 6.5e-58 228.0 180 72.2
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.2e-57 225.3 199 67.3
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 5.5e-57 224.9 128 84.4
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.2e-56 223.8 137 78.1
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 4.0e-55 218.8 167 67.1
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 4.0e-55 218.8 167 67.1
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.2e-54 217.2 203 61.1
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 7.5e-54 214.5 151 69.5
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 3.7e-53 212.2 201 61.2
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 6.3e-53 211.5 223 57.0
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 1.4e-52 210.3 204 58.8
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.4e-52 210.3 195 60.5
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.4e-52 210.3 204 56.9
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 9.1e-52 207.6 205 56.6
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 9.1e-52 207.6 193 63.2
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 9.1e-52 207.6 158 67.7
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 2.7e-51 206.1 157 62.4
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 1.0e-50 204.1 222 54.5
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 1.5e-49 200.3 203 53.2
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 4.2e-49 198.7 109 89.9
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.6e-48 196.8 108 89.8
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 2.6e-46 189.5 156 58.3
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 4.4e-46 188.7 110 87.3
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 9.2e-36 154.5 148 64.9
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 4.7e-32 142.1 100 69.0
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 8.0e-32 141.4 144 58.3
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 8.9e-31 137.9 72 88.9
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 3.4e-30 136.0 122 62.3
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.3e-29 134.0 136 61.8
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 6.4e-29 131.7 141 57.4
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 7.8e-27 124.8 174 40.2
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 2.0e-22 110.2 68 75.0
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 2.0e-22 110.2 68 75.0
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 5.6e-17 92.0 58 74.1
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.0e-14 83.6 52 78.8
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 4.2e-12 75.9 99 51.5


User provided reference genes

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