Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 2.4e-105 385.6 200 100.0
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 1.1e-41 174.1 194 57.2
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 2.3e-39 166.4 207 53.1
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 8.0e-29 131.3 208 46.2
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 2.3e-28 129.8 217 44.2
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 2.4e-25 119.8 208 42.3
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 1.3e-23 114.0 236 41.5
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 1.7e-23 113.6 225 41.8
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 5.0e-23 112.1 237 38.8
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 1.5e-22 110.5 234 38.5
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 1.9e-22 110.2 238 37.0
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 1.6e-21 107.1 209 39.7
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 4.7e-21 105.5 225 38.2
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 6.2e-21 105.1 225 37.3
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 1.8e-20 103.6 248 36.3
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.8e-20 103.6 239 36.8
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 2.3e-20 103.2 243 36.6
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 2.3e-20 103.2 236 35.6
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 3.1e-20 102.8 238 36.6
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 5.2e-20 102.1 246 36.2
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 5.2e-20 102.1 245 36.3
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 6.8e-20 101.7 213 37.1
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 3.4e-19 99.4 198 39.9
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 4.4e-19 99.0 243 35.0
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 7.5e-19 98.2 242 35.5
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 7.5e-19 98.2 255 32.5
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 9.9e-19 97.8 214 38.8
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.3e-18 97.4 228 36.4
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 1.3e-18 97.4 202 40.1
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.7e-18 97.1 220 40.0
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 1.7e-18 97.1 202 39.6
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.7e-18 97.1 219 36.5
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.7e-18 97.1 238 35.3
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 2.2e-18 96.7 223 38.1
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 2.2e-18 96.7 223 38.1
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 2.2e-18 96.7 243 35.0
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.7e-18 95.9 223 38.6
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 4.9e-18 95.5 212 39.2
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 6.4e-18 95.1 225 38.7
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 1.1e-17 94.4 250 34.8
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 1.4e-17 94.0 196 38.3
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 1.4e-17 94.0 234 35.0
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 2.4e-17 93.2 242 35.1
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 2.4e-17 93.2 232 38.4
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 3.2e-17 92.8 214 36.9
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.2e-17 92.8 224 38.4
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 3.2e-17 92.8 167 41.3
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 4.1e-17 92.4 228 36.4
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 4.1e-17 92.4 179 41.3
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 4.1e-17 92.4 244 34.8
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 4.1e-17 92.4 253 32.4
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 5.4e-17 92.0 197 37.1
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 5.4e-17 92.0 242 38.0
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 1.2e-16 90.9 216 36.6
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.2e-16 90.9 237 34.6
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 1.2e-16 90.9 190 42.1
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.6e-16 90.5 220 38.6
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 1.6e-16 90.5 244 36.1
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 1.6e-16 90.5 191 38.2
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 2.7e-16 89.7 246 33.3
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 2.7e-16 89.7 236 34.3
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 4.6e-16 89.0 246 32.9
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 4.6e-16 89.0 208 37.0
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 7.8e-16 88.2 253 32.4
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 7.8e-16 88.2 227 35.7
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 7.8e-16 88.2 162 42.6
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 7.8e-16 88.2 211 36.5
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.3e-15 87.4 219 37.9
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 2.3e-15 86.7 244 38.1
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 3.0e-15 86.3 242 33.1
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 3.0e-15 86.3 249 33.7
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 3.0e-15 86.3 268 31.3
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 3.9e-15 85.9 192 34.9
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 5.1e-15 85.5 242 33.9
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 5.1e-15 85.5 238 33.6
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 5.1e-15 85.5 189 35.4
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 6.6e-15 85.1 255 31.8
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 6.6e-15 85.1 218 37.6
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 6.6e-15 85.1 180 38.9
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 8.6e-15 84.7 180 38.9
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 8.6e-15 84.7 240 36.2
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 8.6e-15 84.7 260 30.4
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 8.6e-15 84.7 207 35.3
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 1.5e-14 84.0 210 35.7
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 1.5e-14 84.0 184 39.7
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 2.5e-14 83.2 231 34.2
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.5e-14 83.2 241 36.1
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.3e-14 82.8 218 37.6
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 4.3e-14 82.4 225 33.3
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.3e-14 81.6 221 36.2
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 7.3e-14 81.6 201 35.8
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 9.5e-14 81.3 248 31.9
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 9.5e-14 81.3 172 40.7
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.2e-13 80.9 226 34.1
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 1.2e-13 80.9 241 34.9
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 1.6e-13 80.5 195 35.4
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 1.6e-13 80.5 246 30.9
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.6e-13 80.5 209 34.0
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.8e-13 79.7 226 35.4
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 4.7e-13 79.0 175 40.0
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 4.7e-13 79.0 175 40.0
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.7e-13 79.0 229 34.1
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 4.7e-13 79.0 181 34.8
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 6.2e-13 78.6 199 35.2
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 8.1e-13 78.2 244 32.4
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 1.1e-12 77.8 248 32.7
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.4e-12 77.4 209 38.3
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 1.8e-12 77.0 177 40.7
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 3.1e-12 76.3 203 34.5
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 6.8e-12 75.1 219 33.8
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 8.9e-12 74.7 212 34.4
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 8.9e-12 74.7 222 35.1
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 1.2e-11 74.3 219 35.6
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.5e-11 73.9 146 39.0
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 2.0e-11 73.6 211 33.2
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.0e-11 73.6 162 39.5
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 2.0e-11 73.6 234 30.3
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 2.6e-11 73.2 224 33.9
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 3.4e-11 72.8 213 31.5
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 5.8e-11 72.0 187 34.8
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 5.8e-11 72.0 196 35.7
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 5.8e-11 72.0 180 32.2
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 9.9e-11 71.2 214 32.2
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 1.7e-10 70.5 194 36.1
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 2.9e-10 69.7 155 37.4
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 4.9e-10 68.9 109 44.0
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 4.9e-10 68.9 209 31.6
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 6.4e-10 68.6 147 40.1
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 1.4e-09 67.4 164 34.1
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 3.2e-09 66.2 212 30.7
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 7.1e-09 65.1 124 37.1
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 9.2e-09 64.7 227 34.4
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 1.2e-08 64.3 132 40.2
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 7.8e-08 61.6 202 33.2
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.0e-07 61.2 192 34.4
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 1.0e-07 61.2 213 31.9
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 2.3e-07 60.1 151 32.5
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 3.0e-07 59.7 201 31.3
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.5e-06 56.6 150 36.0
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 2.5e-06 56.6 198 33.3
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 2.5e-06 56.6 195 29.7
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 4.3e-06 55.8 82 47.6
Gohir.D09G239350 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.3e-06 55.8 63 50.8
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 5.6e-06 55.5 140 37.1
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 5.6e-06 55.5 229 30.6
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 9.6e-06 54.7 187 31.0
Gorai.006G262100 Gossypium raimondii HOM05D003676 ORTHO05D004262 9.6e-06 54.7 63 49.2


User provided reference genes

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