Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0528731 Helianthus annuus HOM05D053934 ORTHO05D048209 4.6e-104 381.3 207 100.0
HanXRQChr15g0477461 Helianthus annuus HOM05D000260 ORTHO05D000318 2.9e-13 79.7 99 48.5
HanXRQChr15g0477481 Helianthus annuus HOM05D000260 ORTHO05D000318 4.9e-13 79.0 99 49.5
HanXRQChr17g0552991 Helianthus annuus HOM05D000260 ORTHO05D000318 8.4e-13 78.2 99 48.5
HanXRQChr15g0477451 Helianthus annuus HOM05D000260 ORTHO05D000318 9.2e-12 74.7 115 46.1
HanXRQChr15g0477471 Helianthus annuus HOM05D000260 ORTHO05D000318 1.6e-11 73.9 97 49.5
HanXRQChr15g0477431 Helianthus annuus HOM05D000260 ORTHO05D000318 2.7e-11 73.2 99 45.5
ECA246G3766 Erigeron canadensis HOM05D000260 ORTHO05D000318 6.0e-11 72.0 99 45.5
Lsat_1_v5_gn_3_61861 Lactuca sativa HOM05D000260 ORTHO05D000318 2.3e-10 70.1 86 50.0
HanXRQChr16g0528711 Helianthus annuus HOM05D000260 ORTHO05D000318 3.0e-10 69.7 87 50.6
Lsat_1_v5_gn_3_61840 Lactuca sativa HOM05D000260 ORTHO05D000318 3.0e-10 69.7 102 43.1
Lsat_1_v5_gn_3_62600 Lactuca sativa HOM05D000260 ORTHO05D000318 3.9e-10 69.3 99 45.5
HanXRQChr17g0552971 Helianthus annuus HOM05D000260 ORTHO05D000318 8.7e-10 68.2 99 44.4
ECA246G3137 Erigeron canadensis HOM05D000260 ORTHO05D000318 3.3e-09 66.2 88 44.3
HanXRQChr17g0552961 Helianthus annuus HOM05D000260 ORTHO05D000318 4.3e-09 65.9 92 45.7
HanXRQChr17g0552021 Helianthus annuus HOM05D000260 ORTHO05D000318 1.2e-08 64.3 69 49.3
Lsat_1_v5_gn_3_62620 Lactuca sativa HOM05D000260 ORTHO05D000318 1.2e-08 64.3 100 44.0
Lsat_1_v5_gn_3_61760 Lactuca sativa HOM05D000260 ORTHO05D000318 6.2e-08 62.0 105 40.0
Nitab4.5_0000694g0050 Nicotiana tabacum HOM05D000260 ORTHO05D000318 2.4e-07 60.1 110 39.1
vmacro10592 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 3.1e-07 59.7 82 42.7
Actinidia16679 Actinidia chinensis HOM05D000260 ORTHO05D000318 5.3e-07 58.9 92 41.3
RhsimUnG0127800 Rhododendron simsii HOM05D000260 ORTHO05D000318 5.3e-07 58.9 91 41.8
Sopen05g004690 Solanum pennellii HOM05D000260 ORTHO05D000318 5.3e-07 58.9 38 71.1
Eucgr.J01515 Eucalyptus grandis HOM05D000260 ORTHO05D000318 6.9e-07 58.5 38 65.8
Solyc05g008930.3 Solanum lycopersicum HOM05D000260 ORTHO05D000318 6.9e-07 58.5 38 68.4
Oeu050383.1 Olea europaea HOM05D000260 ORTHO05D000318 1.5e-06 57.4 37 70.3
PGSC0003DMG401030531 Solanum tuberosum HOM05D000260 ORTHO05D000318 1.5e-06 57.4 38 65.8
GSVIVG01030992001 Vitis vinifera HOM05D000260 ORTHO05D000318 2.0e-06 57.0 38 63.2
Nitab4.5_0002112g0030 Nicotiana tabacum HOM05D000260 ORTHO05D000318 2.6e-06 56.6 105 38.1
PGR004G2255 Punica granatum HOM05D000260 ORTHO05D000318 2.6e-06 56.6 38 63.2
Actinidia17643 Actinidia chinensis HOM05D000260 ORTHO05D000318 3.4e-06 56.2 38 63.2
Rhsim09G0104300 Rhododendron simsii HOM05D000260 ORTHO05D000318 3.4e-06 56.2 85 41.2
CSS0016791 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.4e-06 55.8 38 63.2
CSS0049750 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.4e-06 55.8 38 63.2
CANSAT78G1831 Cannabis sativa HOM05D000260 ORTHO05D000318 4.4e-06 55.8 38 63.2
CAN.G610.31 Capsicum annuum HOM05D000260 ORTHO05D000318 4.4e-06 55.8 38 65.8
HanXRQChr08g0213461 Helianthus annuus HOM05D000260 ORTHO05D000318 4.4e-06 55.8 97 39.2
CiPaw.04G043800 Carya illinoinensis HOM05D000260 ORTHO05D000318 5.8e-06 55.5 38 60.5
Duzib133G1450 Durio zibethinus HOM05D000260 ORTHO05D000318 5.8e-06 55.5 37 64.9
RhsimUnG0112300 Rhododendron simsii HOM05D000260 ORTHO05D000318 5.8e-06 55.5 38 65.8
SHI22371 Sapria himalayana HOM05D000260 ORTHO05D000318 5.8e-06 55.5 36 63.9
MSTRG.23593 Avicennia marina HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
CSS0000188 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
CSS0009234 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
CSS0009724 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
CSS0014137 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
CSS0018926 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
CSS0021340 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
CSS0025610 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 63.2
CSS0044393 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
Cfa019742 Carpinus fangiana HOM05D000260 ORTHO05D000318 7.6e-06 55.1 40 60.0
Eucgr.F02517 Eucalyptus grandis HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 62.2
FvH4_2g12540 Fragaria vesca HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 60.5
FAN15G3700 Fragaria x ananassa HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 60.5
FAN20G1929 Fragaria x ananassa HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 60.5
FAN24G2351 Fragaria x ananassa HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 60.5
FAN27G2036 Fragaria x ananassa HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 60.5
Hma1.2p1_1024F.1_g249140 Hydrangea macrophylla HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
Lsat_1_v5_gn_2_60600 Lactuca sativa HOM05D053934 ORTHO05D048209 7.6e-06 55.1 90 40.0
Lsat_1_v5_gn_8_40101 Lactuca sativa HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
Prupe.3G146500 Prunus persica HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 60.5
Rhsim08G0083400 Rhododendron simsii HOM05D000260 ORTHO05D000318 7.6e-06 55.1 37 64.9
RcHm_v2.0_Chr6g0273041 Rosa chinensis HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 60.5
Solyc02g086270.4 Solanum lycopersicum HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 63.2
Sopen02g030950 Solanum pennellii HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 63.2
PGSC0003DMG400026384 Solanum tuberosum HOM05D000260 ORTHO05D000318 7.6e-06 55.1 38 63.2
Dinv34801 Davidia involucrata HOM05D003134 ORTHO05D003500 9.9e-06 54.7 38 60.5
Migut.L00493 Erythranthe guttata HOM05D000260 ORTHO05D000318 9.9e-06 54.7 37 62.2
Oeu036852.1 Olea europaea HOM05D000260 ORTHO05D000318 9.9e-06 54.7 36 66.7
vmacro10595 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 9.9e-06 54.7 91 38.5


User provided reference genes

Program Settings