Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 5.0e-235 817.4 409 100.0
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 9.5e-178 627.1 388 84.5
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 2.8e-177 625.5 414 78.7
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 1.7e-150 536.6 434 64.3
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 2.4e-144 516.2 380 69.2
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 1.2e-143 513.8 423 64.5
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 5.8e-143 511.5 383 68.7
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 1.0e-142 510.8 421 64.6
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 1.7e-142 510.0 381 68.5
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 2.2e-142 509.6 438 61.9
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 2.9e-142 509.2 372 69.9
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 4.9e-142 508.4 382 68.6
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 1.9e-141 506.5 396 65.7
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 1.3e-139 500.4 374 66.8
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 3.9e-139 498.8 427 62.8
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 2.5e-138 496.1 373 68.4
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 9.7e-138 494.2 370 67.6
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 9.7e-138 494.2 421 62.5
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 2.8e-137 492.7 422 62.8
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.1e-136 490.7 424 63.0
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 1.4e-136 490.3 409 62.6
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 2.4e-136 489.6 429 61.8
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 9.0e-136 487.6 383 67.4
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 5.9e-135 485.0 413 61.0
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 2.2e-134 483.0 374 66.3
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 2.9e-134 482.6 397 63.5
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 7.2e-133 478.0 373 65.4
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 9.4e-133 477.6 399 62.9
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 7.9e-132 474.6 368 65.5
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 1.4e-131 473.8 372 65.6
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.4e-131 473.8 372 65.6
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 3.0e-131 472.6 389 62.7
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 3.0e-131 472.6 372 65.3
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 3.0e-131 472.6 374 64.4
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 1.1e-130 470.7 397 62.5
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.5e-130 469.5 372 64.8
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 2.2e-129 466.5 404 61.1
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 1.4e-128 463.8 399 62.4
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 3.1e-128 462.6 410 60.2
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 1.2e-127 460.7 393 61.6
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 4.5e-127 458.8 384 62.5
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 1.7e-126 456.8 372 63.2
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 2.2e-126 456.4 422 58.1
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 2.9e-126 456.1 375 63.2
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 3.8e-126 455.7 426 58.0
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 5.0e-126 455.3 403 59.6
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 8.5e-126 454.5 378 61.9
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 1.4e-125 453.8 390 61.0
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 2.5e-125 453.0 381 63.5
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 5.5e-125 451.8 396 60.1
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 7.2e-125 451.4 390 60.3
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 9.4e-125 451.1 389 61.2
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 1.6e-124 450.3 418 58.4
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 3.6e-124 449.1 389 61.2
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 7.9e-124 448.0 374 62.6
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 1.8e-123 446.8 390 59.7
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 5.1e-123 445.3 375 61.6
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 1.5e-122 443.7 375 61.3
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 1.5e-122 443.7 336 64.6
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.3e-121 440.7 389 60.2
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 5.3e-120 435.3 391 59.3
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 5.3e-120 435.3 391 59.3
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 3.6e-116 422.5 447 53.0
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 3.0e-115 419.5 415 55.9
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 1.1e-114 417.5 385 56.9
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 2.8e-113 412.9 372 59.7
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 4.8e-113 412.1 348 62.1
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 6.3e-113 411.8 315 66.3
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 9.1e-112 407.9 315 65.7
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 5.0e-110 402.1 371 58.5
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 6.1e-108 395.2 362 58.8
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 4.0e-107 392.5 389 54.2
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 2.0e-103 380.2 372 55.9
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 3.5e-103 379.4 378 54.8
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 2.6e-98 363.2 382 53.1
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.1e-96 357.8 305 60.3
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 5.5e-93 345.5 308 60.4
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 9.2e-88 328.2 406 44.3
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 5.9e-87 325.5 287 59.6
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 6.6e-86 322.0 258 64.7
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 8.9e-83 311.6 255 63.5
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 7.1e-72 275.4 400 41.2
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 5.8e-66 255.8 215 60.0
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 4.1e-64 249.6 451 35.3
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 3.3e-61 240.0 391 39.6
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 3.9e-54 216.5 164 68.9
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 9.9e-50 201.8 207 52.7
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 1.5e-42 177.9 210 48.1
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 2.2e-41 174.1 125 68.8
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 6.0e-39 166.0 143 59.4
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.3e-36 158.3 118 69.5
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 1.6e-20 104.8 81 63.0
MCO02G191 Micromonas commoda HOM05D007414 ORTHO05D009482 4.6e-15 86.7 336 26.8
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 1.0e-14 85.5 49 81.6
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 1.1e-11 75.5 259 29.0
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 6.1e-07 59.7 38 63.2
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 5.1e-06 56.6 397 23.2
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 6.7e-06 56.2 420 23.3
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 6.7e-06 56.2 272 24.6


User provided reference genes

Program Settings