Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 4.3e-32 140.6 65 100.0
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 1.1e-24 115.9 68 80.9
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 1.8e-22 108.6 63 77.8
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 5.3e-22 107.1 63 77.8
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 1.2e-21 105.9 68 72.1
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 1.2e-21 105.9 68 72.1
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.5e-21 105.5 68 70.6
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.5e-21 105.5 68 70.6
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 1.5e-21 105.5 68 70.6
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 3.4e-21 104.4 68 70.6
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 3.4e-21 104.4 68 70.6
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 4.5e-21 104.0 68 69.1
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 4.5e-21 104.0 62 75.8
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 5.8e-21 103.6 68 70.6
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 5.8e-21 103.6 68 70.6
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 5.8e-21 103.6 62 74.2
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 7.6e-21 103.2 63 74.6
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 7.6e-21 103.2 68 69.1
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 7.6e-21 103.2 68 69.1
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 1.3e-20 102.4 68 69.1
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 1.3e-20 102.4 68 67.6
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 1.7e-20 102.1 68 69.1
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 2.2e-20 101.7 68 67.6
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 2.2e-20 101.7 68 66.2
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 2.9e-20 101.3 63 71.4
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.9e-20 101.3 67 68.7
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 2.9e-20 101.3 68 70.6
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 2.9e-20 101.3 68 67.6
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 3.8e-20 100.9 68 70.6
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 3.8e-20 100.9 68 70.6
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 4.9e-20 100.5 68 69.1
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 4.9e-20 100.5 68 69.1
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 6.5e-20 100.1 68 69.1
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 6.5e-20 100.1 68 70.6
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 6.5e-20 100.1 68 66.2
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 6.5e-20 100.1 68 70.6
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 6.5e-20 100.1 64 70.3
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 6.5e-20 100.1 68 67.6
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 1.1e-19 99.4 68 66.2
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 1.1e-19 99.4 68 64.7
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 1.1e-19 99.4 68 66.2
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 1.1e-19 99.4 68 67.6
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 1.4e-19 99.0 68 66.2
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 1.9e-19 98.6 68 69.1
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 1.9e-19 98.6 68 69.1
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 1.9e-19 98.6 68 69.1
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 1.9e-19 98.6 68 69.1
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 1.9e-19 98.6 68 64.7
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 1.9e-19 98.6 68 69.1
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 2.5e-19 98.2 68 64.7
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 2.5e-19 98.2 68 63.2
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 2.5e-19 98.2 68 64.7
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 3.2e-19 97.8 68 64.7
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 4.2e-19 97.4 67 65.7
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 4.2e-19 97.4 67 64.2
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 5.5e-19 97.1 62 71.0
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 5.5e-19 97.1 68 66.2
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 5.5e-19 97.1 68 64.7
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 5.5e-19 97.1 68 64.7
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 7.1e-19 96.7 68 63.2
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 1.2e-18 95.9 68 66.2
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 1.2e-18 95.9 62 71.0
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 1.2e-18 95.9 68 66.2
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 3.5e-18 94.4 62 69.4
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 4.6e-18 94.0 68 63.2
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 6.0e-18 93.6 68 60.3
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 6.0e-18 93.6 68 60.3
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 1.0e-17 92.8 68 60.3
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 1.0e-17 92.8 66 62.1
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 1.3e-17 92.4 68 61.8
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.3e-17 91.7 68 58.8
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.3e-17 91.7 68 58.8
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 3.0e-17 91.3 68 63.2
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 3.0e-17 91.3 62 64.5
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 6.7e-17 90.1 68 58.8
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 3.3e-16 87.8 68 57.4
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 2.8e-15 84.7 68 54.4
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 9.0e-14 79.7 53 69.8
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 4.5e-13 77.4 53 67.9
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 5.9e-13 77.0 68 54.4
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 2.2e-12 75.1 62 54.8
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 1.9e-11 72.0 68 44.1
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 3.1e-06 54.7 37 73.0
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 4.1e-06 54.3 46 58.7
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 6.9e-06 53.5 38 63.2
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 9.0e-06 53.1 38 65.8


User provided reference genes

Program Settings