Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0524731 Helianthus annuus HOM05D017364 ORTHO05D002252 2.4e-50 201.8 100 100.0
HanXRQChr01g0007701 Helianthus annuus HOM05D017364 ORTHO05D002252 1.3e-35 152.9 97 78.4
HanXRQChr16g0524721 Helianthus annuus HOM05D017364 ORTHO05D002252 1.3e-30 136.3 80 88.8
HanXRQChr13g0410611 Helianthus annuus HOM05D017364 ORTHO05D002252 4.3e-23 111.3 102 59.8
HanXRQChr08g0232471 Helianthus annuus HOM05D017364 ORTHO05D002252 1.1e-15 86.7 84 56.0
HanXRQChr10g0305871 Helianthus annuus HOM05D017364 ORTHO05D002252 9.6e-15 83.6 127 41.7
Lsat_1_v5_gn_9_109540 Lactuca sativa HOM05D007227 ORTHO05D002252 3.7e-14 81.6 74 56.8
HanXRQChr08g0216611 Helianthus annuus HOM05D052495 ORTHO05D002252 8.1e-14 80.5 86 53.5
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 1.0e-11 73.6 90 44.4
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 1.4e-10 69.7 95 41.1
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 2.7e-09 65.5 90 37.8
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 6.0e-09 64.3 83 41.0
HanXRQChr16g0505811 Helianthus annuus HOM05D007227 ORTHO05D002252 7.9e-09 63.9 91 40.7
HanXRQChr04g0127891 Helianthus annuus HOM05D007227 ORTHO05D002252 1.3e-08 63.2 90 40.0
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 1.8e-08 62.8 91 40.7
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 5.1e-08 61.2 90 38.9
HanXRQChr10g0306101 Helianthus annuus HOM05D017364 ORTHO05D002252 5.1e-08 61.2 55 60.0
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 5.1e-08 61.2 98 36.7
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 5.1e-08 61.2 90 37.8
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 1.1e-07 60.1 84 41.7
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 1.5e-07 59.7 87 41.4
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.5e-07 58.9 90 37.8
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 3.3e-07 58.5 85 38.8
Atru.chr5.2993 Acer truncatum HOM05D007227 ORTHO05D002252 4.3e-07 58.2 95 35.8
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 5.7e-07 57.8 85 38.8
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 7.4e-07 57.4 90 36.7
ECA236G1258 Erigeron canadensis HOM05D007227 ORTHO05D002252 7.4e-07 57.4 88 37.5
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 1.3e-06 56.6 96 36.5
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 1.6e-06 56.2 93 40.9
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 2.1e-06 55.8 90 36.7
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 2.1e-06 55.8 90 37.8
SalBow6G0041 Salvia bowleyana HOM05D007227 ORTHO05D002252 3.7e-06 55.1 88 40.9
SalBow6G1279 Salvia bowleyana HOM05D007227 ORTHO05D002252 3.7e-06 55.1 88 40.9
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 4.8e-06 54.7 91 39.6
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 4.8e-06 54.7 111 31.5
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 6.2e-06 54.3 91 38.5
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 6.2e-06 54.3 99 34.3
vmacro17500 Vaccinium macrocarpon HOM05D017364 ORTHO05D002252 6.2e-06 54.3 90 38.9
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 6.2e-06 54.3 96 36.5
Ciclev10029484m.g Citrus clementina HOM05D007556 ORTHO05D002252 8.2e-06 53.9 94 35.1
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 8.2e-06 53.9 85 36.5
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 8.2e-06 53.9 91 30.8
Lj9C368G9 Lonicera japonica HOM05D007227 ORTHO05D002252 8.2e-06 53.9 74 43.2
Rhsim11G0174800 Rhododendron simsii HOM05D007227 ORTHO05D002252 8.2e-06 53.9 75 42.7


User provided reference genes

Program Settings