Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0524621 Helianthus annuus HOM05D006420 ORTHO05D008009 1.2e-132 476.5 235 100.0
ECA232G4325 Erigeron canadensis HOM05D006420 ORTHO05D008009 1.8e-88 329.7 217 72.4
Lsat_1_v5_gn_9_123421 Lactuca sativa HOM05D006420 ORTHO05D008009 4.0e-88 328.6 213 75.1
vmacro05011 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 1.8e-83 313.2 217 71.4
Lj9A85G78 Lonicera japonica HOM05D006420 ORTHO05D008009 4.3e-82 308.5 218 69.3
Lj9A86G16 Lonicera japonica HOM05D006420 ORTHO05D008009 4.3e-82 308.5 218 69.3
Nn4g26277 Nelumbo nucifera HOM05D006420 ORTHO05D008009 4.3e-82 308.5 233 64.8
Dinv23938 Davidia involucrata HOM05D006420 ORTHO05D008009 9.6e-82 307.4 218 69.7
RhsimUnG0226900 Rhododendron simsii HOM05D006420 ORTHO05D008009 1.3e-81 307.0 215 68.8
MSTRG.5100 Avicennia marina HOM05D006420 ORTHO05D008009 6.2e-81 304.7 218 66.1
Actinidia05697 Actinidia chinensis HOM05D006420 ORTHO05D008009 1.8e-80 303.1 218 67.0
Hund21694 Selenicereus undatus HOM05D006420 ORTHO05D008009 2.4e-80 302.8 219 68.0
Sc06g0003280 Simmondsia chinensis HOM05D006420 ORTHO05D008009 6.9e-80 301.2 217 67.7
Hma1.2p1_0928F.1_g237740 Hydrangea macrophylla HOM05D006420 ORTHO05D008009 9.0e-80 300.8 221 66.1
CSS0034260 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 7.6e-79 297.7 218 67.0
TAR636G1821 Trochodendron aralioides HOM05D006420 ORTHO05D008009 7.6e-79 297.7 215 68.4
Oeu010909.1 Olea europaea HOM05D006420 ORTHO05D008009 1.7e-78 296.6 213 66.7
CSS0037657 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 4.9e-78 295.0 218 66.5
GSVIVG01000081001 Vitis vinifera HOM05D006420 ORTHO05D008009 4.9e-78 295.0 218 66.1
EL10Ac4g09358 Beta vulgaris HOM05D006420 ORTHO05D008009 6.5e-78 294.7 217 65.4
Migut.N01987 Erythranthe guttata HOM05D006420 ORTHO05D008009 6.5e-78 294.7 218 66.5
Migut.N02012 Erythranthe guttata HOM05D006420 ORTHO05D008009 6.5e-78 294.7 218 66.5
Manes.08G120400 Manihot esculenta HOM05D006420 ORTHO05D008009 2.5e-77 292.7 216 63.4
COL.COLO4_13456 Corchorus olitorius HOM05D006420 ORTHO05D008009 3.2e-77 292.4 218 64.2
Gohir.D08G227700 Gossypium hirsutum HOM05D006420 ORTHO05D008009 1.6e-76 290.0 218 64.2
Gorai.004G241900 Gossypium raimondii HOM05D006420 ORTHO05D008009 1.6e-76 290.0 218 64.2
PGR083G0891 Punica granatum HOM05D006420 ORTHO05D008009 2.7e-76 289.3 216 63.9
Nn1g02269 Nelumbo nucifera HOM05D006420 ORTHO05D008009 3.5e-76 288.9 216 65.7
Thecc.05G302400 Theobroma cacao HOM05D006420 ORTHO05D008009 3.5e-76 288.9 218 62.8
CiPaw.07G020700 Carya illinoinensis HOM05D006420 ORTHO05D008009 6.0e-76 288.1 216 64.8
Cc02_g33350 Coffea canephora HOM05D006420 ORTHO05D008009 7.9e-76 287.7 218 63.8
DCAR_029409 Daucus carota HOM05D006420 ORTHO05D008009 7.9e-76 287.7 220 62.3
Gohir.A08G210900 Gossypium hirsutum HOM05D006420 ORTHO05D008009 7.9e-76 287.7 218 63.8
Lalb_Chr21g0310681 Lupinus albus HOM05D006420 ORTHO05D008009 1.8e-75 286.6 209 65.6
TAR365G0270 Trochodendron aralioides HOM05D006420 ORTHO05D008009 3.0e-75 285.8 214 65.9
arahy.Tifrunner.gnm1.ann1.GHU2GX Arachis hypogaea HOM05D006420 ORTHO05D008009 3.9e-75 285.4 216 64.4
Ah.04g160290 Amaranthus hybridus HOM05D006420 ORTHO05D008009 6.7e-75 284.6 215 63.3
arahy.Tifrunner.gnm1.ann1.7ESY4D Arachis hypogaea HOM05D006420 ORTHO05D008009 8.7e-75 284.3 216 64.4
Cfa006594 Carpinus fangiana HOM05D006420 ORTHO05D008009 8.7e-75 284.3 218 62.4
Duzib177G0348 Durio zibethinus HOM05D006420 ORTHO05D008009 2.5e-74 282.7 218 62.8
Cfa006595 Carpinus fangiana HOM05D006420 ORTHO05D008009 3.3e-74 282.3 218 61.9
Peaxi162Scf00037g00513 Petunia axillaris HOM05D006420 ORTHO05D008009 5.7e-74 281.6 218 62.4
RcHm_v2.0_Chr3g0454981 Rosa chinensis HOM05D006420 ORTHO05D008009 5.7e-74 281.6 220 62.7
Aqoxy5G00493 Aquilegia oxysepala HOM05D006420 ORTHO05D008009 9.6e-74 280.8 216 62.5
Nitab4.5_0000137g0140 Nicotiana tabacum HOM05D006420 ORTHO05D008009 9.6e-74 280.8 218 62.4
TWI56G0424 Tripterygium wilfordii HOM05D006420 ORTHO05D008009 9.6e-74 280.8 213 64.3
AUR62000819 Chenopodium quinoa HOM05D006420 ORTHO05D008009 1.6e-73 280.0 219 61.6
CAN.G1034.41 Capsicum annuum HOM05D006420 ORTHO05D008009 2.8e-73 279.3 218 62.4
PGSC0003DMG400024687 Solanum tuberosum HOM05D006420 ORTHO05D008009 4.8e-73 278.5 218 62.8
THA.LOC104820863 Tarenaya hassleriana HOM05D006420 ORTHO05D008009 4.8e-73 278.5 214 60.7
Ciclev10002177m.g Citrus clementina HOM05D006420 ORTHO05D008009 6.3e-73 278.1 218 62.8
MD12G1218500 Malus domestica HOM05D006420 ORTHO05D008009 6.3e-73 278.1 221 62.4
Solyc01g099130.3 Solanum lycopersicum HOM05D006420 ORTHO05D008009 6.3e-73 278.1 218 63.3
Sopen01g042690 Solanum pennellii HOM05D006420 ORTHO05D008009 6.3e-73 278.1 218 63.3
Cpa.g.sc48.61 Carica papaya HOM05D006420 ORTHO05D008009 1.1e-72 277.3 218 63.3
PSO210G7816 Papaver somniferum HOM05D006420 ORTHO05D008009 1.8e-72 276.6 220 60.5
VMungo0720G1765 Vigna mungo HOM05D006420 ORTHO05D008009 3.1e-72 275.8 209 63.6
Duzib106G1877 Durio zibethinus HOM05D006420 ORTHO05D008009 4.1e-72 275.4 218 61.5
FvH4_6g06020 Fragaria vesca HOM05D006420 ORTHO05D008009 9.0e-72 274.2 220 60.5
FAN14G2531 Fragaria x ananassa HOM05D006420 ORTHO05D008009 9.0e-72 274.2 220 60.5
Glyma.10G154000 Glycine max HOM05D006420 ORTHO05D008009 1.2e-71 273.9 209 62.2
Prupe.6G324800 Prunus persica HOM05D006420 ORTHO05D008009 1.2e-71 273.9 221 60.6
AUR62005152 Chenopodium quinoa HOM05D006420 ORTHO05D008009 2.0e-71 273.1 229 59.0
FAN02G2504 Fragaria x ananassa HOM05D006420 ORTHO05D008009 2.0e-71 273.1 218 61.0
CANSAT54G1557 Cannabis sativa HOM05D006420 ORTHO05D008009 2.6e-71 272.7 233 59.2
Glyma.20G234300 Glycine max HOM05D006420 ORTHO05D008009 3.4e-71 272.3 209 62.7
Phvul.007G179700 Phaseolus vulgaris HOM05D006420 ORTHO05D008009 3.4e-71 272.3 209 62.7
Ca_10114_v3 Cicer arietinum L. HOM05D006420 ORTHO05D008009 5.9e-71 271.6 210 62.9
AL1G65580 Arabidopsis lyrata HOM05D006420 ORTHO05D008009 7.6e-71 271.2 221 60.6
FAN09G3808 Fragaria x ananassa HOM05D006420 ORTHO05D008009 7.6e-71 271.2 220 60.0
BcaC06g31763 Brassica carinata HOM05D006420 ORTHO05D008009 1.0e-70 270.8 221 59.7
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 1.3e-70 270.4 218 59.2
MD04G1204800 Malus domestica HOM05D006420 ORTHO05D008009 1.3e-70 270.4 234 56.4
Psat6g150480 Pisum sativum HOM05D006420 ORTHO05D008009 1.3e-70 270.4 229 59.0
FAN05G3282 Fragaria x ananassa HOM05D006420 ORTHO05D008009 1.7e-70 270.0 220 60.5
A03p68650 Brassica napus HOM05D006420 ORTHO05D008009 2.2e-70 269.6 221 58.8
BraSC39t46193Z Brassica rapa HOM05D006420 ORTHO05D008009 2.2e-70 269.6 221 58.8
Atru.chr2.393 Acer truncatum HOM05D006420 ORTHO05D008009 2.9e-70 269.2 215 58.6
HPP92_020377 Vanilla planifolia HOM05D006420 ORTHO05D008009 2.9e-70 269.2 209 61.2
CsaV3_2G005340 Cucumis sativus L. HOM05D006420 ORTHO05D008009 5.0e-70 268.5 220 61.4
Lj5g0015213 Lotus japonicus HOM05D006420 ORTHO05D008009 5.0e-70 268.5 211 62.1
BcaC02g10755 Brassica carinata HOM05D006420 ORTHO05D008009 6.5e-70 268.1 221 59.3
C04p25420 Brassica napus HOM05D006420 ORTHO05D008009 6.5e-70 268.1 221 59.3
BolC4t24060H Brassica oleracea HOM05D006420 ORTHO05D008009 6.5e-70 268.1 221 59.3
Thhalv10023646m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 8.4e-70 267.7 218 58.3
AT1G55000 Arabidopsis thaliana HOM05D006420 ORTHO05D008009 1.9e-69 266.5 223 58.7
Sed0005627 Sechium edule HOM05D006420 ORTHO05D008009 3.2e-69 265.8 214 62.6
TPR.G6113 Trifolium pratense HOM05D006420 ORTHO05D008009 3.2e-69 265.8 210 61.0
CARHR287540 Cardamine hirsuta HOM05D006420 ORTHO05D008009 4.2e-69 265.4 219 58.0
SpUn0004_0090 Schrenkiella parvula HOM05D006420 ORTHO05D008009 4.2e-69 265.4 219 59.4
Carub.0002s0818 Capsella rubella HOM05D006420 ORTHO05D008009 5.5e-69 265.0 219 59.4
ClCG02G015760 Citrullus lanatus HOM05D006420 ORTHO05D008009 9.3e-69 264.2 220 60.5
MBI04_g29616_MAGBIO Magnolia biondii HOM05D006420 ORTHO05D008009 9.3e-69 264.2 188 67.6
Medtr1g082950 Medicago truncatula HOM05D006420 ORTHO05D008009 1.2e-68 263.8 210 60.0
FAN05G1000 Fragaria x ananassa HOM05D006420 ORTHO05D008009 2.7e-68 262.7 238 56.7
Potri.013G021600 Populus trichocarpa HOM05D006420 ORTHO05D008009 1.8e-67 260.0 215 59.1
QL03p007116 Quercus lobata HOM05D006420 ORTHO05D008009 1.6e-65 253.4 241 53.1
Zm00001eb054020 Zea mays HOM05D006420 ORTHO05D008009 4.8e-65 251.9 209 55.0
ATR0332G062 Amborella trichopoda HOM05D006420 ORTHO05D008009 2.4e-64 249.6 214 55.1
Sabra13G0024000 Salix brachista HOM05D006420 ORTHO05D008009 3.1e-64 249.2 208 58.2
Os03g0699600 Oryza sativa ssp. japonica HOM05D006420 ORTHO05D008009 4.1e-64 248.8 209 54.5
Haze_04190 Corylus avellana HOM05D006420 ORTHO05D008009 3.4e-63 245.7 317 43.2
Pp3c16_5370 Physcomitrium patens HOM05D006420 ORTHO05D008009 5.0e-62 241.9 209 56.5
Nitab4.5_0005541g0070 Nicotiana tabacum HOM05D006420 ORTHO05D008009 4.8e-57 225.3 218 53.2
MELO3C004253.2 Cucumis melo HOM05D000208 ORTHO05D000130 4.2e-53 212.2 149 69.1
SGA_v2.0_scaffold81G26063 Striga asiatica HOM05D006420 ORTHO05D000105 9.4e-53 211.1 415 33.7
SMO356G0643 Selaginella moellendorffii HOM05D006420 ORTHO05D008009 8.2e-49 198.0 206 47.1
AagrBONN_evm.TU.Sc2ySwM_368.542 Anthoceros agrestis HOM05D006420 ORTHO05D008009 3.1e-48 196.1 215 48.4
Potri.005G032100 Populus trichocarpa HOM05D006420 ORTHO05D008009 2.3e-43 179.9 151 58.3
Rhsim07G0185100 Rhododendron simsii HOM05D006420 ORTHO05D008009 4.4e-42 175.6 124 68.5
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 5.9e-39 165.2 114 68.4
MD10G1167700 Malus domestica HOM05D006420 ORTHO05D008009 3.0e-35 152.9 111 64.9
QL03p007970 Quercus lobata HOM05D006420 ORTHO05D008009 3.2e-29 132.9 116 56.9
vmacro23281 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 3.2e-29 132.9 93 68.8
QL03p007144 Quercus lobata HOM05D006420 ORTHO05D008009 2.7e-28 129.8 117 57.3
Eucgr.B01949 Eucalyptus grandis HOM05D006420 ORTHO05D008009 4.4e-26 122.5 100 58.0
Eucgr.B01859 Eucalyptus grandis HOM05D006420 ORTHO05D008009 2.2e-25 120.2 96 58.3
Eucgr.B01946 Eucalyptus grandis HOM05D006420 ORTHO05D008009 1.8e-24 117.1 93 59.1
Sabra05G0034600 Salix brachista HOM05D006420 ORTHO05D008009 4.5e-23 112.5 131 45.8
Cre16.g667100 Chlamydomonas reinhardtii HOM05D006420 ORTHO05D008009 1.9e-21 107.1 233 30.5
SEGI_28170 Sequoiadendron giganteum HOM05D006420 ORTHO05D008009 9.5e-21 104.8 83 60.2
vmacro23282 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 3.9e-14 82.8 99 51.5
QL03p007977 Quercus lobata HOM05D006420 ORTHO05D008009 1.4e-08 64.3 77 44.2
QL03p007137 Quercus lobata HOM05D006420 ORTHO05D008009 5.4e-08 62.4 68 47.1


User provided reference genes

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