Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0524441 Helianthus annuus HOM05D007122 ORTHO05D008918 4.4e-150 534.6 277 100.0
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 7.6e-102 374.4 229 85.2
TWI59G0863 Tripterygium wilfordii HOM05D007122 ORTHO05D008918 1.7e-90 336.7 255 70.2
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 2.3e-90 336.3 249 70.7
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 2.3e-90 336.3 269 65.8
EL10Ac5g10570 Beta vulgaris HOM05D007122 ORTHO05D008918 3.3e-89 332.4 266 65.8
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 9.6e-89 330.9 273 65.2
Atru.chr5.816 Acer truncatum HOM05D007122 ORTHO05D008918 3.6e-88 328.9 247 67.2
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 8.1e-88 327.8 260 66.9
Lj9A610T61 Lonicera japonica HOM05D007122 ORTHO05D008918 1.8e-87 326.6 235 72.8
PSO782G5442 Papaver somniferum HOM05D007122 ORTHO05D008918 2.4e-87 326.2 263 66.5
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 4.0e-87 325.5 246 72.8
CANSAT01G1971 Cannabis sativa HOM05D007122 ORTHO05D008918 5.3e-87 325.1 243 68.7
Prupe.3G022800 Prunus persica HOM05D007122 ORTHO05D008918 6.9e-87 324.7 238 71.8
AUR62028625 Chenopodium quinoa HOM05D007122 ORTHO05D008918 1.2e-86 323.9 246 67.5
FvH4_6g36990 Fragaria vesca HOM05D007122 ORTHO05D008918 1.2e-86 323.9 275 64.4
FAN14G1589 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.2e-86 323.9 274 63.5
Sopen08g022350 Solanum pennellii HOM05D007122 ORTHO05D008918 1.2e-86 323.9 243 67.9
AT2G46910 Arabidopsis thaliana HOM05D007122 ORTHO05D008918 1.5e-86 323.6 228 69.7
Carub.0004s2963 Capsella rubella HOM05D007122 ORTHO05D008918 2.0e-86 323.2 253 65.2
MD17G1162500 Malus domestica HOM05D007122 ORTHO05D008918 2.0e-86 323.2 238 71.4
RcHm_v2.0_Chr2g0149531 Rosa chinensis HOM05D007122 ORTHO05D008918 4.4e-86 322.0 274 63.9
Sp4g28930 Schrenkiella parvula HOM05D007122 ORTHO05D008918 4.4e-86 322.0 235 68.9
AUR62008050 Chenopodium quinoa HOM05D007122 ORTHO05D008918 5.8e-86 321.6 225 72.0
CAN.G21.48 Capsicum annuum HOM05D007122 ORTHO05D008918 7.6e-86 321.2 243 67.5
CiPaw.01G090900 Carya illinoinensis HOM05D007122 ORTHO05D008918 7.6e-86 321.2 258 66.3
COL.COLO4_23084 Corchorus olitorius HOM05D007122 ORTHO05D008918 7.6e-86 321.2 261 66.3
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 9.9e-86 320.9 262 65.3
FAN05G3936 Fragaria x ananassa HOM05D007122 ORTHO05D008918 2.2e-85 319.7 274 63.1
Solyc08g068590.4 Solanum lycopersicum HOM05D007122 ORTHO05D008918 2.2e-85 319.7 243 66.7
Aa31LG1G28270 Aethionema arabicum HOM05D007122 ORTHO05D008918 2.9e-85 319.3 235 68.5
Thhalv10001577m.g Eutrema salsugineum HOM05D007122 ORTHO05D008918 6.4e-85 318.2 228 68.4
QL05p084392 Quercus lobata HOM05D007122 ORTHO05D008918 6.4e-85 318.2 258 65.1
Cpa.g.sc57.60 Carica papaya HOM05D007122 ORTHO05D008918 8.4e-85 317.8 253 66.8
Nn1g00501 Nelumbo nucifera HOM05D007122 ORTHO05D008918 8.4e-85 317.8 285 62.8
Peaxi162Scf00822g00313 Petunia axillaris HOM05D007122 ORTHO05D008918 1.1e-84 317.4 229 70.3
Gohir.D11G107500 Gossypium hirsutum HOM05D007122 ORTHO05D008918 1.9e-84 316.6 262 64.9
CARHR142260 Cardamine hirsuta HOM05D007122 ORTHO05D008918 3.2e-84 315.8 268 61.9
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 5.4e-84 315.1 226 71.7
GSVIVG01027487001 Vitis vinifera HOM05D007122 ORTHO05D008918 7.1e-84 314.7 251 68.9
Glyma.07G002100 Glycine max HOM05D007122 ORTHO05D008918 9.3e-84 314.3 227 71.8
A05p00930 Brassica napus HOM05D007122 ORTHO05D008918 1.2e-83 313.9 274 59.9
Ca_20970_v3 Cicer arietinum L. HOM05D007122 ORTHO05D008918 2.1e-83 313.2 275 61.5
THA.LOC104802109 Tarenaya hassleriana HOM05D007122 ORTHO05D008918 2.1e-83 313.2 240 66.2
Lj3g0016159 Lotus japonicus HOM05D007122 ORTHO05D008918 3.5e-83 312.4 271 61.6
MBI12_g33188_MAGBIO Magnolia biondii HOM05D007122 ORTHO05D008918 3.5e-83 312.4 226 70.8
BcaC02g12634 Brassica carinata HOM05D007122 ORTHO05D008918 4.6e-83 312.0 268 60.8
Gorai.007G115100 Gossypium raimondii HOM05D007122 ORTHO05D008918 7.9e-83 311.2 267 63.7
Nitab4.5_0006202g0020 Nicotiana tabacum HOM05D007122 ORTHO05D008918 1.0e-82 310.8 240 68.3
Phvul.010G164100 Phaseolus vulgaris HOM05D007122 ORTHO05D008918 3.0e-82 309.3 235 67.7
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 5.1e-82 308.5 274 61.7
BraA05t19094Z Brassica rapa HOM05D007122 ORTHO05D008918 6.6e-82 308.1 275 59.3
Eucgr.E00013 Eucalyptus grandis HOM05D007122 ORTHO05D008918 6.6e-82 308.1 240 67.1
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 2.5e-81 306.2 269 60.2
Ciclev10021604m.g Citrus clementina HOM05D007122 ORTHO05D008918 1.6e-80 303.5 239 66.1
Medtr4g005390 Medicago truncatula HOM05D007122 ORTHO05D008918 1.6e-80 303.5 249 63.1
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea HOM05D007122 ORTHO05D008918 3.6e-80 302.4 264 61.4
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea HOM05D007122 ORTHO05D008918 8.1e-80 301.2 251 62.5
Os10g0509200 Oryza sativa ssp. japonica HOM05D007122 ORTHO05D008918 8.1e-80 301.2 251 61.4
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 8.1e-80 301.2 233 67.0
PGSC0003DMG400029047 Solanum tuberosum HOM05D007122 ORTHO05D008918 1.1e-79 300.8 260 61.2
Actinidia33027 Actinidia chinensis HOM05D007122 ORTHO05D008918 5.3e-79 298.5 245 67.8
ClCG07G014660 Citrullus lanatus HOM05D007122 ORTHO05D008918 9.0e-79 297.7 248 64.1
ATR0579G047 Amborella trichopoda HOM05D007122 ORTHO05D008918 1.2e-78 297.4 235 66.4
Lalb_Chr04g0264851 Lupinus albus HOM05D007122 ORTHO05D008918 1.5e-78 297.0 292 57.5
CsaV3_3G030490 Cucumis sativus L. HOM05D007122 ORTHO05D008918 2.6e-78 296.2 246 64.2
Sabra02G0131900 Salix brachista HOM05D007122 ORTHO05D008918 4.5e-78 295.4 336 53.3
CDE02G4652 Ceratophyllum demersum HOM05D007122 ORTHO05D008918 1.3e-77 293.9 233 66.1
HPP92_007409 Vanilla planifolia HOM05D007122 ORTHO05D008918 2.2e-77 293.1 257 61.1
MELO3C026712.2 Cucumis melo HOM05D007122 ORTHO05D008918 1.1e-76 290.8 246 62.6
Zm00001eb220590 Zea mays HOM05D007122 ORTHO05D008918 2.4e-76 289.7 225 64.0
Hund02816 Selenicereus undatus HOM05D007122 ORTHO05D008918 4.2e-76 288.9 269 59.1
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 9.3e-76 287.7 262 58.4
vmacro08515 Vaccinium macrocarpon HOM05D007122 ORTHO05D008918 3.9e-74 282.3 235 66.0
Rhsim04G0175900 Rhododendron simsii HOM05D007122 ORTHO05D008918 2.8e-72 276.2 281 58.0
Manes.01G237100 Manihot esculenta HOM05D007122 ORTHO05D008918 1.2e-67 260.8 206 68.0
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 2.1e-67 260.0 247 58.7
Sed0017612 Sechium edule HOM05D007122 ORTHO05D008918 2.3e-66 256.5 192 69.8
Gohir.A11G103000 Gossypium hirsutum HOM05D007122 ORTHO05D008918 7.4e-65 251.5 179 71.5
PGR042G2951 Punica granatum HOM05D007122 ORTHO05D008918 1.3e-64 250.8 206 63.6
SMO232G0083 Selaginella moellendorffii HOM05D007122 ORTHO05D008918 2.8e-64 249.6 244 54.1
VMungo0331G0463 Vigna mungo HOM05D000070 ORTHO05D003491 3.7e-64 249.2 228 59.6
Ah.11g050690 Amaranthus hybridus HOM05D007122 ORTHO05D008918 2.6e-62 243.0 247 54.7
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.3e-61 240.7 196 64.8
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 2.9e-61 239.6 249 54.6
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.5e-60 236.5 188 63.3
Mapoly0069s0014 Marchantia polymorpha HOM05D007122 ORTHO05D008918 1.2e-59 234.2 275 48.7
Aqoxy5G04392 Aquilegia oxysepala HOM05D007122 ORTHO05D008918 7.4e-57 224.9 192 65.1
PSO063G7482 Papaver somniferum HOM05D007122 ORTHO05D008918 1.3e-53 214.2 148 74.3
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 9.4e-52 208.0 159 66.7
Pp3c11_15290 Physcomitrium patens HOM05D007122 ORTHO05D008918 5.7e-49 198.7 206 50.5
Duzib133G0914 Durio zibethinus HOM05D007122 ORTHO05D008918 1.3e-48 197.6 211 53.1
Glyma.08G224600 Glycine max HOM05D007122 ORTHO05D008918 6.3e-48 195.3 154 67.5
FAN02G0509 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.8e-47 193.7 197 54.3
Sc05g0001590 Simmondsia chinensis HOM05D007122 ORTHO05D008918 1.0e-45 188.0 191 56.0
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 1.4e-44 184.1 149 63.8
Glyma.14G134000 Glycine max HOM05D007122 ORTHO05D008918 1.2e-43 181.0 155 63.2
Haze_16258 Corylus avellana HOM05D007122 ORTHO05D008918 1.1e-39 167.9 352 36.6
Cre01.g039550 Chlamydomonas reinhardtii HOM05D007122 ORTHO05D008918 5.5e-28 129.0 244 35.7
Zm00001eb094490 Zea mays HOM05D007122 ORTHO05D008918 9.4e-28 128.3 100 65.0
Pp3c2_10460 Physcomitrium patens HOM05D007122 ORTHO05D008918 3.6e-27 126.3 147 42.2
Psat7g265400 Pisum sativum HOM05D007122 ORTHO05D008918 2.2e-24 117.1 88 71.6
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 3.7e-24 116.3 181 42.0
Hma1.2p1_0074F.1_g038930 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 6.8e-18 95.5 60 80.0
MCO07G119 Micromonas commoda HOM05D007122 ORTHO05D008918 8.8e-18 95.1 235 33.2
SGA_v2.0_scaffold159G37569 Striga asiatica HOM05D007122 ORTHO05D008918 5.6e-12 75.9 119 38.7
FAN05G3242 Fragaria x ananassa HOM05D007122 ORTHO05D008918 4.4e-09 66.2 36 83.3
FAN14G0283 Fragaria x ananassa HOM05D007122 ORTHO05D008918 4.4e-09 66.2 65 55.4
FvH4_6g35960 Fragaria vesca HOM05D007122 ORTHO05D008918 9.8e-09 65.1 36 83.3
Pp3c15_4460 Physcomitrium patens HOM05D002234 ORTHO05D002254 2.9e-08 63.5 240 28.3
Psat2g138880 Pisum sativum HOM05D002234 ORTHO05D002254 2.9e-08 63.5 234 28.2
THA.LOC104812983 Tarenaya hassleriana HOM05D002234 ORTHO05D002254 2.9e-08 63.5 240 29.2
MD16G1280700 Malus domestica HOM05D002234 ORTHO05D002254 3.7e-08 63.2 254 26.8
PRCOL_00002778 Prasinoderma coloniale HOM05D007122 ORTHO05D008918 3.7e-08 63.2 205 35.1
Rhsim11G0020200 Rhododendron simsii HOM05D002234 ORTHO05D002254 3.7e-08 63.2 237 29.5
SMO367G0795 Selaginella moellendorffii HOM05D002234 ORTHO05D002254 4.9e-08 62.8 238 28.2
TPR.G8085 Trifolium pratense HOM05D002234 ORTHO05D002254 6.4e-08 62.4 246 26.0
CBR_g49209 Chara braunii HOM05D002234 ORTHO05D002254 8.3e-08 62.0 224 29.0
Potri.001G137900 Populus trichocarpa HOM05D002234 ORTHO05D002254 1.4e-07 61.2 234 29.1
Lj2A233G30 Lonicera japonica HOM05D002234 ORTHO05D002254 1.8e-07 60.8 234 26.5
Medtr5g029590 Medicago truncatula HOM05D002234 ORTHO05D002254 1.8e-07 60.8 242 26.4
THA.LOC104798488 Tarenaya hassleriana HOM05D002234 ORTHO05D002254 2.4e-07 60.5 235 29.4
Ca_25189_v3 Cicer arietinum L. HOM05D002234 ORTHO05D002254 3.2e-07 60.1 249 28.9
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 4.1e-07 59.7 137 28.5
Lalb_Chr16g0381141 Lupinus albus HOM05D002234 ORTHO05D002254 5.4e-07 59.3 235 27.2
Duzib205G1709 Durio zibethinus HOM05D002234 ORTHO05D002254 7.0e-07 58.9 239 31.0
Lsat_1_v5_gn_8_74601 Lactuca sativa HOM05D050850 ORTHO05D008918 7.0e-07 58.9 35 74.3
CSS0028378 Camellia sinensis var. sinensis HOM05D002234 ORTHO05D002254 9.2e-07 58.5 230 26.5
TAR119G0001 Trochodendron aralioides HOM05D002234 ORTHO05D002254 9.2e-07 58.5 235 27.7
Mapoly0070s0031 Marchantia polymorpha HOM05D002234 ORTHO05D002254 1.2e-06 58.2 243 29.2
DCAR_027858 Daucus carota HOM05D002234 ORTHO05D002254 1.6e-06 57.8 248 29.0
Nn3g19404 Nelumbo nucifera HOM05D002234 ORTHO05D002254 1.6e-06 57.8 234 28.6
BraA07t28698Z Brassica rapa HOM05D006432 ORTHO05D008257 2.0e-06 57.4 268 26.9
Manes.17G014600 Manihot esculenta HOM05D002234 ORTHO05D002254 2.0e-06 57.4 231 29.9
ECA246G1777 Erigeron canadensis HOM05D002234 ORTHO05D002254 2.7e-06 57.0 238 28.2
EL10Ac8g20136 Beta vulgaris HOM05D002234 ORTHO05D002254 3.5e-06 56.6 256 27.3
FAN09G2218 Fragaria x ananassa HOM05D007122 ORTHO05D008918 3.5e-06 56.6 57 52.6
Sed0005477 Sechium edule HOM05D002234 ORTHO05D002254 3.5e-06 56.6 246 27.6
CiPaw.12G067500 Carya illinoinensis HOM05D002234 ORTHO05D002254 5.9e-06 55.8 254 28.0
Hma1.2p1_1358F.1_g278010 Hydrangea macrophylla HOM05D002234 ORTHO05D002254 5.9e-06 55.8 251 27.5
MBI19_g03680_MAGBIO Magnolia biondii HOM05D002234 ORTHO05D002254 5.9e-06 55.8 246 27.2
GSVIVG01013072001 Vitis vinifera HOM05D002234 ORTHO05D002254 5.9e-06 55.8 227 29.5
Aqoxy3G02205 Aquilegia oxysepala HOM05D002234 ORTHO05D002254 7.8e-06 55.5 229 27.5
BcaC04g21266 Brassica carinata HOM05D002234 ORTHO05D002254 7.8e-06 55.5 241 26.6
A09p26540 Brassica napus HOM05D002234 ORTHO05D002254 7.8e-06 55.5 241 26.6
C09p33660 Brassica napus HOM05D002234 ORTHO05D002254 7.8e-06 55.5 241 26.6
BolC9t56200H Brassica oleracea HOM05D002234 ORTHO05D002254 7.8e-06 55.5 241 26.6
BraA09t38228Z Brassica rapa HOM05D002234 ORTHO05D002254 7.8e-06 55.5 241 26.6
Thecc.03G308900 Theobroma cacao HOM05D002234 ORTHO05D002254 7.8e-06 55.5 230 31.7
TWI81G0224 Tripterygium wilfordii HOM05D002234 ORTHO05D002254 7.8e-06 55.5 234 29.5


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