Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0523661 Helianthus annuus HOM05D000066 ORTHO05D221877 2.6e-71 271.9 134 100.0
HanXRQChr03g0069151 Helianthus annuus HOM05D000066 ORTHO05D009093 2.4e-08 62.8 37 73.0
ECA240G3676 Erigeron canadensis HOM05D000066 ORTHO05D009093 5.2e-08 61.6 37 70.3
Manes.07G051100 Manihot esculenta HOM05D000066 ORTHO05D009093 5.2e-08 61.6 37 73.0
Atru.chr5.2224 Acer truncatum HOM05D000066 ORTHO05D009093 6.8e-08 61.2 37 70.3
DCAR_003602 Daucus carota HOM05D000066 ORTHO05D009093 6.8e-08 61.2 37 70.3
HanXRQChr15g0480941 Helianthus annuus HOM05D001466 ORTHO05D001452 6.8e-08 61.2 50 70.0
HanXRQChr15g0480951 Helianthus annuus HOM05D001466 ORTHO05D001452 6.8e-08 61.2 50 70.0
Lj9C338T4 Lonicera japonica HOM05D000066 ORTHO05D009093 8.9e-08 60.8 37 67.6
Aqoxy6G02974 Aquilegia oxysepala HOM05D000066 ORTHO05D009093 2.6e-07 59.3 37 67.6
Nn5g30697 Nelumbo nucifera HOM05D000066 ORTHO05D009093 3.4e-07 58.9 37 67.6
Lsat_1_v5_gn_9_112641 Lactuca sativa HOM05D000066 ORTHO05D009093 4.4e-07 58.5 37 64.9
Sed0004861 Sechium edule HOM05D000066 ORTHO05D009093 5.8e-07 58.2 37 62.2
ClCG10G009910 Citrullus lanatus HOM05D000066 ORTHO05D009093 9.9e-07 57.4 37 62.2
Cc02_g20260 Coffea canephora HOM05D000066 ORTHO05D009093 9.9e-07 57.4 37 64.9
MELO3C018033.2 Cucumis melo HOM05D000066 ORTHO05D009093 9.9e-07 57.4 37 62.2
PSO541G3614 Papaver somniferum HOM05D000066 ORTHO05D009093 1.3e-06 57.0 37 64.9
Potri.009G083800 Populus trichocarpa HOM05D000066 ORTHO05D009093 1.3e-06 57.0 37 64.9
CSS0011833 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D009093 1.7e-06 56.6 37 64.9
MBI16_g05024_MAGBIO Magnolia biondii HOM05D000066 ORTHO05D000055 1.7e-06 56.6 37 62.2
Oeu041858.1 Olea europaea HOM05D000066 ORTHO05D009093 1.7e-06 56.6 37 64.9
CiPaw.06G162600 Carya illinoinensis HOM05D000066 ORTHO05D009093 2.2e-06 56.2 37 64.9
Hma1.2p1_2654F.1_g326240 Hydrangea macrophylla HOM05D000066 ORTHO05D009093 2.2e-06 56.2 37 62.2
Nn6g34564 Nelumbo nucifera HOM05D000066 ORTHO05D009093 2.2e-06 56.2 37 62.2
TWI59G1402 Tripterygium wilfordii HOM05D000066 ORTHO05D009093 2.2e-06 56.2 37 62.2
GSVIVG01037018001 Vitis vinifera HOM05D000066 ORTHO05D009093 2.2e-06 56.2 37 62.2
COL.COLO4_17805 Corchorus olitorius HOM05D000066 ORTHO05D009093 2.9e-06 55.8 37 59.5
Duzib132G0590 Durio zibethinus HOM05D000066 ORTHO05D009093 2.9e-06 55.8 37 62.2
FAN15G1918 Fragaria x ananassa HOM05D000066 ORTHO05D009093 2.9e-06 55.8 37 62.2
HanXRQChr12g0379961 Helianthus annuus HOM05D000066 ORTHO05D009093 2.9e-06 55.8 31 74.2
PSO675G0465 Papaver somniferum HOM05D000066 ORTHO05D009093 3.8e-06 55.5 37 62.2
PGR042G0042 Punica granatum HOM05D000066 ORTHO05D009093 3.8e-06 55.5 37 64.9
Eucgr.G01174 Eucalyptus grandis HOM05D000066 ORTHO05D009093 4.9e-06 55.1 37 62.2
Eucgr.G01182 Eucalyptus grandis HOM05D000066 ORTHO05D009093 4.9e-06 55.1 37 62.2
TAR628G0479 Trochodendron aralioides HOM05D000066 ORTHO05D009093 4.9e-06 55.1 37 62.2
CANSAT25G0777 Cannabis sativa HOM05D000066 ORTHO05D009093 6.4e-06 54.7 37 56.8
Cfa004724 Carpinus fangiana HOM05D000066 ORTHO05D009093 6.4e-06 54.7 37 59.5
Dinv09522 Davidia involucrata HOM05D000066 ORTHO05D009093 6.4e-06 54.7 37 59.5
FvH4_2g02970 Fragaria vesca HOM05D000066 ORTHO05D009093 6.4e-06 54.7 37 59.5
FAN24G0446 Fragaria x ananassa HOM05D000066 ORTHO05D009093 6.4e-06 54.7 37 59.5
Gohir.D01G171800 Gossypium hirsutum HOM05D000066 ORTHO05D009093 8.4e-06 54.3 37 62.2
Gorai.002G213300 Gossypium raimondii HOM05D000066 ORTHO05D009093 8.4e-06 54.3 37 62.2
MD10G1112700 Malus domestica HOM05D000066 ORTHO05D009093 8.4e-06 54.3 37 59.5
Prupe.8G152500 Prunus persica HOM05D000066 ORTHO05D009093 8.4e-06 54.3 37 62.2
QL11p028569 Quercus lobata HOM05D000066 ORTHO05D009093 8.4e-06 54.3 37 56.8
QL11p028704 Quercus lobata HOM05D000066 ORTHO05D009093 8.4e-06 54.3 37 56.8
Thecc.02G032400 Theobroma cacao HOM05D000066 ORTHO05D009093 8.4e-06 54.3 37 59.5
TAR381G0977 Trochodendron aralioides HOM05D000066 ORTHO05D009093 8.4e-06 54.3 37 59.5


User provided reference genes

Program Settings