Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0521331 Helianthus annuus HOM05D007265 ORTHO05D009118 8.4e-28 126.3 65 100.0
Oeu008708.1 Olea europaea HOM05D007265 ORTHO05D009118 1.1e-22 109.4 64 87.5
Nn1g00287 Nelumbo nucifera HOM05D007265 ORTHO05D009118 1.4e-22 109.0 65 84.6
Thecc.01G340400 Theobroma cacao HOM05D007265 ORTHO05D009118 9.0e-22 106.3 64 82.8
PGR042G1917 Punica granatum HOM05D007265 ORTHO05D009118 1.2e-21 105.9 64 82.8
Lj7E499T0 Lonicera japonica HOM05D007265 ORTHO05D009118 2.0e-21 105.1 64 81.2
Nitab4.5_0003865g0020 Nicotiana tabacum HOM05D007265 ORTHO05D009118 2.0e-21 105.1 64 82.8
Hma1.2p1_0390F.1_g142620 Hydrangea macrophylla HOM05D007265 ORTHO05D009118 2.6e-21 104.8 65 81.5
Duzib133G0073 Durio zibethinus HOM05D007265 ORTHO05D009118 3.4e-21 104.4 64 81.2
MD01G1083600 Malus domestica HOM05D007265 ORTHO05D009118 3.4e-21 104.4 62 83.9
MD07G1152300 Malus domestica HOM05D007265 ORTHO05D009118 3.4e-21 104.4 62 83.9
PSO063G4371 Papaver somniferum HOM05D007265 ORTHO05D009118 3.4e-21 104.4 65 80.0
PSO170G4391 Papaver somniferum HOM05D007265 ORTHO05D009118 5.8e-21 103.6 65 80.0
CSS0038215 Camellia sinensis var. sinensis HOM05D007265 ORTHO05D009118 7.6e-21 103.2 64 81.2
Nitab4.5_0000258g0270 Nicotiana tabacum HOM05D007265 ORTHO05D009118 7.6e-21 103.2 64 79.7
Nitab4.5_0001763g0020 Nicotiana tabacum HOM05D007265 ORTHO05D009118 7.6e-21 103.2 64 81.2
Duzib138G0325 Durio zibethinus HOM05D007265 ORTHO05D009118 1.0e-20 102.8 64 81.2
ATR0602G127 Amborella trichopoda HOM05D007265 ORTHO05D009118 1.3e-20 102.4 65 80.0
CiPaw.01G077600 Carya illinoinensis HOM05D007265 ORTHO05D009118 1.3e-20 102.4 62 82.3
Prupe.2G190600 Prunus persica HOM05D007265 ORTHO05D009118 1.3e-20 102.4 62 82.3
TAR374G1528 Trochodendron aralioides HOM05D007265 ORTHO05D009118 1.3e-20 102.4 61 83.6
Cc02_g39560 Coffea canephora HOM05D007265 ORTHO05D009118 2.2e-20 101.7 62 80.6
Lsat_1_v5_gn_4_39661 Lactuca sativa HOM05D007265 ORTHO05D009118 2.9e-20 101.3 58 87.9
Atru.chr5.686 Acer truncatum HOM05D007265 ORTHO05D009118 3.8e-20 100.9 62 80.6
DCAR_005402 Daucus carota HOM05D007265 ORTHO05D009118 3.8e-20 100.9 64 78.1
Gohir.A11G097900 Gossypium hirsutum HOM05D007265 ORTHO05D009118 6.5e-20 100.1 64 78.1
Gohir.D11G102600 Gossypium hirsutum HOM05D007265 ORTHO05D009118 6.5e-20 100.1 64 78.1
CAN.G1415.20 Capsicum annuum HOM05D007265 ORTHO05D009118 1.1e-19 99.4 64 76.6
Ciclev10023834m.g Citrus clementina HOM05D007265 ORTHO05D009118 1.1e-19 99.4 64 76.6
Aqoxy5G04249 Aquilegia oxysepala HOM05D007265 ORTHO05D009118 1.4e-19 99.0 61 80.3
PGSC0003DMG400000233 Solanum tuberosum HOM05D007265 ORTHO05D009118 1.4e-19 99.0 64 78.1
GSVIVG01027169001 Vitis vinifera HOM05D007265 ORTHO05D009118 1.4e-19 99.0 64 76.6
Gohir.D12G116700 Gossypium hirsutum HOM05D007265 ORTHO05D009118 1.9e-19 98.6 64 76.6
Sed0002056 Sechium edule HOM05D007265 ORTHO05D009118 2.5e-19 98.2 62 79.0
Glyma.03G258500 Glycine max HOM05D007265 ORTHO05D009118 3.2e-19 97.8 62 77.4
Glyma.19G257100 Glycine max HOM05D007265 ORTHO05D009118 3.2e-19 97.8 62 77.4
DCAR_025264 Daucus carota HOM05D007265 ORTHO05D009118 4.2e-19 97.4 64 75.0
Lj1g0009143 Lotus japonicus HOM05D007265 ORTHO05D009118 4.2e-19 97.4 62 77.4
Phvul.006G114500 Phaseolus vulgaris HOM05D007265 ORTHO05D009118 4.2e-19 97.4 62 77.4
Gohir.A12G113200 Gossypium hirsutum HOM05D007265 ORTHO05D009118 7.1e-19 96.7 64 75.0
HanXRQChr13g0423241 Helianthus annuus HOM05D007265 ORTHO05D009118 7.1e-19 96.7 65 75.4
Manes.01G244801 Manihot esculenta HOM05D007265 ORTHO05D009118 7.1e-19 96.7 62 77.4
arahy.Tifrunner.gnm1.ann1.4N8QKH Arachis hypogaea HOM05D007265 ORTHO05D009118 9.3e-19 96.3 61 78.7
arahy.Tifrunner.gnm1.ann1.PH1UFL Arachis hypogaea HOM05D007265 ORTHO05D009118 1.2e-18 95.9 60 78.3
Os05g0542100 Oryza sativa ssp. japonica HOM05D007265 ORTHO05D009118 1.2e-18 95.9 64 73.4
Solyc01g096090.4 Solanum lycopersicum HOM05D007265 ORTHO05D009118 1.2e-18 95.9 64 76.6
Sopen01g039810 Solanum pennellii HOM05D007265 ORTHO05D009118 1.2e-18 95.9 64 76.6
AT2G46540 Arabidopsis thaliana HOM05D007265 ORTHO05D009118 1.6e-18 95.5 64 71.9
BcaC02g12671 Brassica carinata HOM05D007265 ORTHO05D009118 1.6e-18 95.5 64 71.9
BcaC02g12679 Brassica carinata HOM05D007265 ORTHO05D009118 1.6e-18 95.5 64 71.9
C04p01380 Brassica napus HOM05D007265 ORTHO05D009118 1.6e-18 95.5 64 71.9
BolC4t21791H Brassica oleracea HOM05D007265 ORTHO05D009118 1.6e-18 95.5 64 71.9
BraA05t19124Z Brassica rapa HOM05D007265 ORTHO05D009118 1.6e-18 95.5 64 71.9
Carub.0004s2926 Capsella rubella HOM05D007265 ORTHO05D009118 1.6e-18 95.5 64 71.9
MELO3C022263.2 Cucumis melo HOM05D007265 ORTHO05D009118 1.6e-18 95.5 62 74.2
Sp4g28590 Schrenkiella parvula HOM05D007265 ORTHO05D009118 1.6e-18 95.5 64 71.9
AL4G45970 Arabidopsis lyrata HOM05D007265 ORTHO05D009118 2.1e-18 95.1 64 70.3
CsaV3_6G008500 Cucumis sativus L. HOM05D007265 ORTHO05D009118 2.7e-18 94.7 62 74.2
HanXRQChr03g0093001 Helianthus annuus HOM05D007265 ORTHO05D009118 2.7e-18 94.7 62 75.8
Manes.05G021500 Manihot esculenta HOM05D007265 ORTHO05D009118 2.7e-18 94.7 62 75.8
THA.LOC104802081 Tarenaya hassleriana HOM05D007265 ORTHO05D009118 2.7e-18 94.7 64 68.8
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 2.7e-18 94.7 64 71.9
Potri.002G173101 Populus trichocarpa HOM05D007265 ORTHO05D009118 4.6e-18 94.0 66 71.2
TWI59G0786 Tripterygium wilfordii HOM05D007265 ORTHO05D009118 4.6e-18 94.0 62 74.2
CANSAT56G3703 Cannabis sativa HOM05D007265 ORTHO05D009118 1.0e-17 92.8 62 72.6
THA.LOC104817372 Tarenaya hassleriana HOM05D007265 ORTHO05D009118 1.0e-17 92.8 64 67.2
Migut.N01534 Erythranthe guttata HOM05D007265 ORTHO05D009118 1.3e-17 92.4 62 72.6
Lsat_1_v5_gn_3_126500 Lactuca sativa HOM05D007265 ORTHO05D009118 1.3e-17 92.4 57 82.5
BcaC02g07039 Brassica carinata HOM05D007265 ORTHO05D009118 1.8e-17 92.0 64 70.3
vmacro13170 Vaccinium macrocarpon HOM05D007265 ORTHO05D009118 1.8e-17 92.0 58 79.3
COL.COLO4_06226 Corchorus olitorius HOM05D007265 ORTHO05D009118 2.3e-17 91.7 54 85.2
Medtr7g117700 Medicago truncatula HOM05D007265 ORTHO05D009118 2.3e-17 91.7 62 71.0
CARHR141880 Cardamine hirsuta HOM05D007265 ORTHO05D009118 3.0e-17 91.3 64 68.8
Ca_09518_v3 Cicer arietinum L. HOM05D007265 ORTHO05D009118 3.0e-17 91.3 62 69.4
Oeu007878.1 Olea europaea HOM05D007265 ORTHO05D009118 3.9e-17 90.9 55 83.6
A04p34450 Brassica napus HOM05D007265 ORTHO05D009118 5.1e-17 90.5 64 68.8
Nn3g18955 Nelumbo nucifera HOM05D007265 ORTHO05D009118 5.1e-17 90.5 65 76.9
Sabra02G0140200 Salix brachista HOM05D007265 ORTHO05D009118 6.7e-17 90.1 66 66.7
BraA04t18903Z Brassica rapa HOM05D007265 ORTHO05D009118 1.9e-16 88.6 64 67.2
MBI07_g24775_MAGBIO Magnolia biondii HOM05D007265 ORTHO05D009118 2.5e-16 88.2 60 73.3
Lalb_Chr18g0044541 Lupinus albus HOM05D007265 ORTHO05D009118 4.3e-16 87.4 62 71.0
Sc01g0002550 Simmondsia chinensis HOM05D007265 ORTHO05D009118 7.4e-16 86.7 57 75.4
Hund16719 Selenicereus undatus HOM05D007265 ORTHO05D009118 9.6e-16 86.3 80 58.8
ClCG06G002640 Citrullus lanatus HOM05D007265 ORTHO05D009118 1.6e-15 85.5 56 71.4
BolC4t28709H Brassica oleracea HOM05D007265 ORTHO05D009118 2.1e-15 85.1 64 64.1
Gorai.008G126400 Gossypium raimondii HOM05D007265 ORTHO05D009118 2.1e-15 85.1 55 76.4
Lalb_Chr15g0076341 Lupinus albus HOM05D007265 ORTHO05D009118 2.1e-15 85.1 62 69.4
MSTRG.17355 Avicennia marina HOM05D007265 ORTHO05D009118 3.7e-15 84.3 55 78.2
BcaC02g07016 Brassica carinata HOM05D007265 ORTHO05D009118 1.4e-14 82.4 56 69.6
Hund27188 Selenicereus undatus HOM05D007265 ORTHO05D009118 1.4e-14 82.4 57 71.9
Rhsim01G0174400 Rhododendron simsii HOM05D007265 ORTHO05D009118 2.4e-14 81.6 80 57.5
A05p01230 Brassica napus HOM05D007265 ORTHO05D009118 3.1e-14 81.3 55 72.7
Psat3g174080 Pisum sativum HOM05D007265 ORTHO05D009118 3.1e-14 81.3 56 71.4
SalBow5G3999 Salvia bowleyana HOM05D002476 ORTHO05D002652 5.3e-14 80.5 55 72.7
Psat3g001880 Pisum sativum HOM05D007265 ORTHO05D009118 9.0e-14 79.7 52 73.1
Aa31LG1G27910 Aethionema arabicum HOM05D007265 ORTHO05D009118 4.5e-13 77.4 54 66.7
EL10Ac1g00247 Beta vulgaris HOM05D007265 ORTHO05D009118 5.9e-13 77.0 55 63.6
AUR62004508 Chenopodium quinoa HOM05D007265 ORTHO05D009118 3.8e-12 74.3 54 64.8
Thhalv10001742m.g Eutrema salsugineum HOM05D007265 ORTHO05D009118 1.1e-11 72.8 112 41.1
Gorai.007G109700 Gossypium raimondii HOM05D007265 ORTHO05D009118 1.4e-11 72.4 45 80.0
BcaNung06658 Brassica carinata HOM05D007265 ORTHO05D009118 3.2e-11 71.2 47 72.3
Ah.05g179400 Amaranthus hybridus HOM05D007265 ORTHO05D009118 7.2e-11 70.1 57 59.6
Os01g0705500 Oryza sativa ssp. japonica HOM05D007265 ORTHO05D009118 2.7e-10 68.2 46 71.7
RcHm_v2.0_Chr1g0360081 Rosa chinensis HOM05D000497 ORTHO05D013080 2.3e-09 65.1 36 86.1
Nitab4.5_0010712g0030 Nicotiana tabacum HOM05D007265 ORTHO05D009118 6.7e-09 63.5 36 83.3
SGA_v2.0_scaffold232G43548 Striga asiatica HOM05D007265 ORTHO05D009118 7.4e-08 60.1 37 78.4
TAR375G0162 Trochodendron aralioides HOM05D007265 ORTHO05D009118 1.4e-06 55.8 45 73.3
Potri.014G100250 Populus trichocarpa HOM05D007265 ORTHO05D009118 3.1e-06 54.7 40 67.5
AUR62016412 Chenopodium quinoa HOM05D007265 ORTHO05D009118 4.1e-06 54.3 63 44.4


User provided reference genes

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