Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 5.5e-231 803.9 395 100.0
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 1.9e-207 725.7 395 89.1
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 1.4e-197 693.0 398 85.4
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 4.4e-180 634.8 398 78.1
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.9e-176 621.7 387 78.0
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.5e-175 619.8 388 77.3
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 9.5e-175 617.1 384 78.4
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 6.2e-174 614.4 398 75.6
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 3.1e-173 612.1 389 76.1
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 5.2e-173 611.3 398 75.1
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 1.2e-172 610.1 347 84.1
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.5e-172 609.8 362 81.5
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 5.8e-172 607.8 394 75.9
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 7.6e-172 607.4 391 75.2
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 2.9e-171 605.5 347 83.3
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 2.9e-171 605.5 388 76.0
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 2.4e-170 602.4 388 75.5
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 3.2e-170 602.1 395 75.7
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 3.2e-170 602.1 400 73.0
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 4.1e-170 601.7 415 72.0
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 7.1e-170 600.9 399 73.9
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 1.2e-169 600.1 398 75.1
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 2.7e-169 599.0 360 80.0
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 2.7e-169 599.0 347 81.6
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 3.5e-169 598.6 401 72.8
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 7.8e-169 597.4 388 75.0
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 1.0e-168 597.0 392 74.2
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 1.7e-168 596.3 347 80.4
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 3.0e-168 595.5 400 73.8
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 3.0e-168 595.5 347 82.7
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 3.9e-168 595.1 398 72.9
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.1e-167 593.6 400 73.0
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 1.9e-167 592.8 350 81.7
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 4.3e-167 591.7 346 81.5
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 5.6e-167 591.3 404 73.0
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 5.6e-167 591.3 394 72.6
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 9.6e-167 590.5 393 74.3
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 1.2e-166 590.1 350 80.6
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 1.2e-166 590.1 340 81.2
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 2.1e-166 589.3 350 79.4
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 2.1e-166 589.3 391 73.4
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 4.7e-166 588.2 347 79.8
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 6.2e-166 587.8 347 81.3
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 8.1e-166 587.4 386 73.8
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 8.1e-166 587.4 350 80.0
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.4e-165 586.6 350 78.6
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 1.4e-165 586.6 392 74.5
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 2.4e-165 585.9 346 80.1
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 3.1e-165 585.5 350 80.3
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 3.1e-165 585.5 378 74.6
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 1.5e-164 583.2 350 80.0
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 2.0e-164 582.8 393 72.3
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 2.6e-164 582.4 380 74.7
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 4.4e-164 581.6 349 78.5
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 5.8e-164 581.3 340 80.0
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 9.9e-164 580.5 355 78.6
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.7e-163 579.7 368 76.1
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 2.2e-163 579.3 392 73.7
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 2.9e-163 578.9 351 79.8
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.1e-162 577.0 340 80.0
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 1.9e-162 576.2 379 73.9
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 3.2e-162 575.5 332 81.3
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 1.2e-161 573.5 332 81.3
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.6e-161 573.2 334 80.8
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 2.1e-161 572.8 350 77.1
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 2.1e-161 572.8 401 70.6
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 2.1e-161 572.8 395 71.1
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 3.5e-161 572.0 395 72.7
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 4.6e-161 571.6 350 77.1
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 4.6e-161 571.6 332 81.0
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 1.0e-160 570.5 338 80.2
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 1.7e-160 569.7 388 72.4
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.7e-160 569.7 341 80.1
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.7e-160 569.7 332 80.4
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.7e-160 569.7 352 77.6
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 3.0e-160 568.9 349 79.1
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 5.1e-160 568.2 363 74.7
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 6.6e-160 567.8 360 78.1
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 6.6e-160 567.8 349 77.4
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.1e-159 567.0 327 81.7
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 2.5e-159 565.8 349 76.8
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 3.3e-159 565.5 319 84.0
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 3.3e-159 565.5 460 63.9
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 4.3e-159 565.1 347 77.2
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 7.3e-159 564.3 338 79.6
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 9.6e-159 563.9 349 76.2
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 2.1e-158 562.8 359 75.2
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 6.2e-158 561.2 350 76.0
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 6.2e-158 561.2 390 71.8
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.1e-157 560.5 347 76.7
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.1e-157 560.5 350 76.0
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 3.1e-157 558.9 353 75.1
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.2e-156 557.0 329 80.2
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 2.6e-156 555.8 353 75.1
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 2.7e-153 545.8 341 76.0
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 5.6e-151 538.1 358 73.2
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 5.3e-149 531.6 327 78.6
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 3.4e-148 528.9 327 78.0
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.9e-143 513.1 337 71.8
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 9.6e-143 510.8 382 68.8
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 6.9e-141 504.6 330 72.1
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 1.5e-140 503.4 330 71.5
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 4.5e-140 501.9 340 71.2
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 6.5e-139 498.0 349 69.6
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 1.8e-136 490.0 342 67.8
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.2e-124 450.7 351 65.0
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.5e-124 450.3 378 61.1
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 7.9e-121 438.0 355 63.7
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 5.7e-119 431.8 349 59.3
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.4e-112 410.6 285 70.5
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 2.6e-111 406.4 406 51.5
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 1.0e-107 394.4 278 70.5
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.7e-107 393.7 349 55.0
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 8.5e-107 391.3 235 78.7
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 1.9e-106 390.2 242 77.3
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.0e-104 384.4 327 59.6
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 2.2e-102 376.7 285 66.3
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 6.3e-94 348.6 377 48.5
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.5e-66 257.7 287 43.9
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 6.2e-65 252.3 171 70.2
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.1e-64 251.5 165 73.3
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 3.0e-59 233.4 186 61.3
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 2.1e-49 200.7 166 60.2
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.4e-45 188.0 131 72.5
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 1.9e-13 81.3 90 48.9
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 1.9e-13 81.3 90 48.9
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 1.9e-13 81.3 55 74.5
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 1.4e-08 65.1 35 77.1


User provided reference genes

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