Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0519871 Helianthus annuus HOM05D001163 ORTHO05D001769 9.7e-45 183.0 83 100.0
HanXRQChr05g0138031 Helianthus annuus HOM05D001163 ORTHO05D001769 4.7e-31 137.5 62 96.8
HanXRQChr11g0335981 Helianthus annuus HOM05D001163 ORTHO05D001769 5.9e-26 120.6 69 76.8
HanXRQChr05g0151581 Helianthus annuus HOM05D001163 ORTHO05D001769 2.6e-21 105.1 56 83.9
HanXRQChr14g0456141 Helianthus annuus HOM05D001163 ORTHO05D001769 8.2e-20 100.1 61 67.2
ECA238G2182 Erigeron canadensis HOM05D001163 ORTHO05D001769 8.5e-17 90.1 59 66.1
Lj3A935G38 Lonicera japonica HOM05D001163 ORTHO05D001769 8.8e-14 80.1 57 59.6
Nitab4.5_0006341g0010 Nicotiana tabacum HOM05D001163 ORTHO05D001769 4.4e-13 77.8 69 49.3
Dinv36358 Davidia involucrata HOM05D001163 ORTHO05D001769 2.2e-12 75.5 51 62.7
CSS0029005 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D001769 2.8e-12 75.1 57 56.1
PGSC0003DMG400016919 Solanum tuberosum HOM05D001163 ORTHO05D001769 2.8e-12 75.1 51 60.8
CiPaw.01G265000 Carya illinoinensis HOM05D001163 ORTHO05D001769 6.3e-12 73.9 61 52.5
Nn2g13882 Nelumbo nucifera HOM05D001163 ORTHO05D001769 6.3e-12 73.9 67 49.3
Dinv31266 Davidia involucrata HOM05D001163 ORTHO05D001769 1.1e-11 73.2 57 54.4
CSS0033081 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D001769 3.1e-11 71.6 57 52.6
TAR633G2218 Trochodendron aralioides HOM05D001163 ORTHO05D001769 3.1e-11 71.6 57 50.9
Actinidia06719 Actinidia chinensis HOM05D001163 ORTHO05D001769 4.1e-11 71.2 51 56.9
Actinidia18556 Actinidia chinensis HOM05D001163 ORTHO05D001769 4.1e-11 71.2 51 56.9
Nitab4.5_0000107g0210 Nicotiana tabacum HOM05D001163 ORTHO05D001769 4.1e-11 71.2 51 58.8
Solyc11g007910.2 Solanum lycopersicum HOM05D001163 ORTHO05D001769 4.1e-11 71.2 51 58.8
Cfa001773 Carpinus fangiana HOM05D001163 ORTHO05D001769 5.4e-11 70.9 69 46.4
Cc02_g10550 Coffea canephora HOM05D001163 ORTHO05D001769 5.4e-11 70.9 67 46.3
Sopen11g003770 Solanum pennellii HOM05D001163 ORTHO05D001769 7.0e-11 70.5 51 58.8
PGSC0003DMG400027362 Solanum tuberosum HOM05D001163 ORTHO05D001769 7.0e-11 70.5 51 58.8
Gohir.D05G292150 Gossypium hirsutum HOM05D001163 ORTHO05D001769 9.1e-11 70.1 50 58.0
Gorai.009G308200 Gossypium raimondii HOM05D001163 ORTHO05D001769 9.1e-11 70.1 50 58.0
Rhsim03G0111600 Rhododendron simsii HOM05D001163 ORTHO05D001769 9.1e-11 70.1 57 52.6
Haze_16778 Corylus avellana HOM05D001163 ORTHO05D001769 1.2e-10 69.7 61 49.2
Actinidia34787 Actinidia chinensis HOM05D001163 ORTHO05D001769 1.6e-10 69.3 57 52.6
Actinidia38893 Actinidia chinensis HOM05D001163 ORTHO05D001769 1.6e-10 69.3 57 50.9
Duzib114G0656 Durio zibethinus HOM05D001163 ORTHO05D001769 2.0e-10 68.9 61 49.2
Nitab4.5_0000255g0020 Nicotiana tabacum HOM05D001163 ORTHO05D001769 2.0e-10 68.9 57 52.6
Peaxi162Scf00253g00219 Petunia axillaris HOM05D001163 ORTHO05D001769 2.0e-10 68.9 51 56.9
TAR369G0606 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.0e-10 68.9 51 56.9
vmacro07199 Vaccinium macrocarpon HOM05D001163 ORTHO05D001769 2.0e-10 68.9 57 52.6
Hma1.2p1_0454F.1_g156250 Hydrangea macrophylla HOM05D001163 ORTHO05D001769 2.7e-10 68.6 69 49.3
MBI18_g15814_MAGBIO Magnolia biondii HOM05D001163 ORTHO05D001769 2.7e-10 68.6 58 51.7
Solyc03g071680.2 Solanum lycopersicum HOM05D001163 ORTHO05D001769 3.5e-10 68.2 52 53.8
Thecc.10G089900 Theobroma cacao HOM05D001163 ORTHO05D001769 3.5e-10 68.2 61 49.2
Migut.F01674 Erythranthe guttata HOM05D001163 ORTHO05D001769 5.9e-10 67.4 51 54.9
Nitab4.5_0000593g0360 Nicotiana tabacum HOM05D001163 ORTHO05D001769 5.9e-10 67.4 51 56.9
Nn6g35186 Nelumbo nucifera HOM05D001163 ORTHO05D001769 1.0e-09 66.6 58 50.0
Cpa.g.sc53.170 Carica papaya HOM05D001163 ORTHO05D001769 1.3e-09 66.2 58 46.6
TAR623G0804 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.3e-09 66.2 65 46.2
TAR629G3448 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.3e-09 66.2 65 46.2
TAR633G0853 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.3e-09 66.2 65 46.2
Atru.chr12.913 Acer truncatum HOM05D001163 ORTHO05D001769 1.7e-09 65.9 50 56.0
COL.COLO4_32880 Corchorus olitorius HOM05D001163 ORTHO05D001769 1.7e-09 65.9 50 56.0
Manes.07G093800 Manihot esculenta HOM05D001163 ORTHO05D001769 1.7e-09 65.9 50 52.0
Potri.010G231100 Populus trichocarpa HOM05D001163 ORTHO05D001769 1.7e-09 65.9 65 43.1
Sabra08G0020200 Salix brachista HOM05D001163 ORTHO05D001769 2.2e-09 65.5 65 44.6
MSTRG.27505 Avicennia marina HOM05D001163 ORTHO05D001769 3.8e-09 64.7 58 48.3
SalBow6G2739 Salvia bowleyana HOM05D001163 ORTHO05D001769 3.8e-09 64.7 63 49.2
Lj2A24T66 Lonicera japonica HOM05D001163 ORTHO05D001769 5.0e-09 64.3 62 51.6
Rhsim09G0145200 Rhododendron simsii HOM05D001163 ORTHO05D001769 5.0e-09 64.3 57 50.9
Sopen03g019920 Solanum pennellii HOM05D001163 ORTHO05D001769 5.0e-09 64.3 52 51.9
Hund06765 Selenicereus undatus HOM05D001163 ORTHO05D001769 6.5e-09 63.9 57 50.9
Lsat_1_v5_gn_2_103280 Lactuca sativa HOM05D001163 ORTHO05D001769 8.5e-09 63.5 63 50.8
Duzib106G1239 Durio zibethinus HOM05D001163 ORTHO05D001769 1.1e-08 63.2 50 56.0
Gohir.A05G291020 Gossypium hirsutum HOM05D001163 ORTHO05D001769 1.1e-08 63.2 49 53.1
Potri.008G030100 Populus trichocarpa HOM05D001163 ORTHO05D001769 1.1e-08 63.2 65 43.1
QL08p053050 Quercus lobata HOM05D001163 ORTHO05D001769 1.1e-08 63.2 61 45.9
Sabra10G0179200 Salix brachista HOM05D001163 ORTHO05D001769 1.1e-08 63.2 65 43.1
ECA233G4552 Erigeron canadensis HOM05D001163 ORTHO05D001769 2.5e-08 62.0 59 44.1
Gorai.011G233800 Gossypium raimondii HOM05D001163 ORTHO05D001769 2.5e-08 62.0 61 44.3
Lalb_Chr21g0313071 Lupinus albus HOM05D001163 ORTHO05D001769 2.5e-08 62.0 59 42.4
Gohir.A10G200200 Gossypium hirsutum HOM05D001163 ORTHO05D001769 3.2e-08 61.6 61 44.3
Gohir.D10G208100 Gossypium hirsutum HOM05D001163 ORTHO05D001769 3.2e-08 61.6 61 44.3
Sc20g0001490 Simmondsia chinensis HOM05D001163 ORTHO05D001769 3.2e-08 61.6 60 48.3
EL10Ac4g08632 Beta vulgaris HOM05D001163 ORTHO05D001769 4.2e-08 61.2 75 40.0
vmacro10264 Vaccinium macrocarpon HOM05D001163 ORTHO05D001769 5.5e-08 60.8 51 49.0
MSTRG.401 Avicennia marina HOM05D001163 ORTHO05D001769 7.2e-08 60.5 51 51.0
arahy.Tifrunner.gnm1.ann1.SHM2EA Arachis hypogaea HOM05D001163 ORTHO05D001769 9.4e-08 60.1 61 42.6
Aqoxy1G01048 Aquilegia oxysepala HOM05D001163 ORTHO05D001769 1.2e-07 59.7 49 51.0
Peaxi162Scf00543g00214 Petunia axillaris HOM05D001163 ORTHO05D001769 1.2e-07 59.7 50 52.0
THA.LOC104816446 Tarenaya hassleriana HOM05D001163 ORTHO05D001769 1.6e-07 59.3 58 46.6
arahy.Tifrunner.gnm1.ann1.PY5VJM Arachis hypogaea HOM05D001163 ORTHO05D001769 2.1e-07 58.9 61 41.0
CiPaw.02G169900 Carya illinoinensis HOM05D001163 ORTHO05D001769 2.1e-07 58.9 49 51.0
Ciclev10030689m.g Citrus clementina HOM05D001163 ORTHO05D001769 2.1e-07 58.9 57 45.6
RcHm_v2.0_Chr1g0336281 Rosa chinensis HOM05D001163 ORTHO05D001769 2.7e-07 58.5 49 51.0
SGA_v2.0_scaffold176G39390 Striga asiatica HOM05D001163 ORTHO05D001769 3.6e-07 58.2 53 49.1
TWI63G0053 Tripterygium wilfordii HOM05D001163 ORTHO05D001769 4.7e-07 57.8 50 50.0
Lalb_Chr06g0170041 Lupinus albus HOM05D001163 ORTHO05D001769 6.1e-07 57.4 57 40.4
MD02G1237400 Malus domestica HOM05D001163 ORTHO05D001769 6.1e-07 57.4 61 39.3
Prupe.2G094700 Prunus persica HOM05D001163 ORTHO05D001769 6.1e-07 57.4 61 41.0
MD07G1074600 Malus domestica HOM05D001163 ORTHO05D001769 1.0e-06 56.6 61 37.7
Glyma.20G191400 Glycine max HOM05D001163 ORTHO05D001769 1.4e-06 56.2 61 39.3
Medtr1g090803 Medicago truncatula HOM05D001163 ORTHO05D001769 1.4e-06 56.2 70 40.0
PGR044G1566 Punica granatum HOM05D001163 ORTHO05D001769 1.4e-06 56.2 57 43.9
Oeu005285.1 Olea europaea HOM05D001163 ORTHO05D001769 1.8e-06 55.8 63 46.0
SGA_v2.0_scaffold41G15750 Striga asiatica HOM05D001163 ORTHO05D001769 1.8e-06 55.8 50 52.0
Psat6g173560 Pisum sativum HOM05D001163 ORTHO05D001769 3.0e-06 55.1 70 41.4
SalBow4G1952 Salvia bowleyana HOM05D001163 ORTHO05D001769 3.0e-06 55.1 58 44.8
ATR0043G042 Amborella trichopoda HOM05D001163 ORTHO05D001769 4.0e-06 54.7 49 42.9
Lj5g0003206 Lotus japonicus HOM05D001163 ORTHO05D001769 4.0e-06 54.7 57 42.1
Lalb_Chr02g0151121 Lupinus albus HOM05D001163 ORTHO05D001769 5.2e-06 54.3 57 38.6
Oeu005283.1 Olea europaea HOM05D001163 ORTHO05D001769 5.2e-06 54.3 63 44.4
Phvul.011G087100 Phaseolus vulgaris HOM05D001163 ORTHO05D001769 5.2e-06 54.3 68 41.2
VMungo0720G0656 Vigna mungo HOM05D001163 ORTHO05D001769 5.2e-06 54.3 61 39.3
Eucgr.G02736 Eucalyptus grandis HOM05D001163 ORTHO05D001769 6.8e-06 53.9 58 41.4
Sp6g38290 Schrenkiella parvula HOM05D001163 ORTHO05D001769 6.8e-06 53.9 50 46.0
TWI38G1849 Tripterygium wilfordii HOM05D001163 ORTHO05D001769 6.8e-06 53.9 50 50.0
Glyma.10G198600 Glycine max HOM05D001163 ORTHO05D001769 8.8e-06 53.5 61 37.7


User provided reference genes

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