Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0517561 Helianthus annuus HOM05D003712 ORTHO05D004368 2.1e-46 188.7 97 100.0
HanXRQChr16g0517551 Helianthus annuus HOM05D003712 ORTHO05D004368 3.2e-39 164.9 88 96.6
Lsat_1_v5_gn_4_56561 Lactuca sativa HOM05D003712 ORTHO05D004368 1.4e-26 122.9 88 70.5
Lsat_1_v5_gn_4_56621 Lactuca sativa HOM05D003712 ORTHO05D004368 1.4e-26 122.9 88 70.5
Lsat_1_v5_gn_4_56721 Lactuca sativa HOM05D003712 ORTHO05D004368 1.4e-26 122.9 88 70.5
Lsat_1_v5_gn_4_56681 Lactuca sativa HOM05D003712 ORTHO05D004368 2.0e-25 119.0 88 68.2
Lsat_1_v5_gn_4_56741 Lactuca sativa HOM05D003712 ORTHO05D004368 5.8e-25 117.5 90 67.8
Lsat_1_v5_gn_4_56541 Lactuca sativa HOM05D003712 ORTHO05D004368 7.6e-25 117.1 88 63.6
ECA234G4130 Erigeron canadensis HOM05D003712 ORTHO05D004368 2.0e-17 92.4 88 55.7
Migut.H01521 Erythranthe guttata HOM05D003712 ORTHO05D004368 7.1e-15 84.0 85 54.1
FAN05G3297 Fragaria x ananassa HOM05D004871 ORTHO05D005755 8.7e-13 77.0 74 48.6
Oeu032463.1 Olea europaea HOM05D003712 ORTHO05D004368 8.7e-13 77.0 79 46.8
FvH4_6g44501 Fragaria vesca HOM05D003712 ORTHO05D004368 1.1e-12 76.6 74 48.6
FAN14G5484 Fragaria x ananassa HOM05D003712 ORTHO05D004368 1.1e-12 76.6 74 48.6
Eucgr.I00207 Eucalyptus grandis HOM05D003712 ORTHO05D004368 3.3e-12 75.1 85 44.7
FAN02G1220 Fragaria x ananassa HOM05D003712 ORTHO05D004368 7.4e-12 73.9 91 45.1
Potri.007G117900 Populus trichocarpa HOM05D003712 ORTHO05D004368 7.4e-12 73.9 85 48.2
Ciclev10017864m.g Citrus clementina HOM05D003712 ORTHO05D004368 9.7e-12 73.6 85 45.9
Ciclev10033348m.g Citrus clementina HOM05D003712 ORTHO05D004368 9.7e-12 73.6 85 44.7
Manes.12G082800 Manihot esculenta HOM05D003712 ORTHO05D004368 1.3e-11 73.2 85 43.5
Potri.007G106900 Populus trichocarpa HOM05D003712 ORTHO05D004368 1.6e-11 72.8 85 45.9
Prupe.3G230500 Prunus persica HOM05D003712 ORTHO05D004368 1.6e-11 72.8 92 40.2
SalBow7G0868 Salvia bowleyana HOM05D003712 ORTHO05D004368 1.6e-11 72.8 83 45.8
DCAR_008077 Daucus carota HOM05D003712 ORTHO05D004368 2.2e-11 72.4 79 51.9
Prupe.3G230600 Prunus persica HOM05D003712 ORTHO05D004368 2.8e-11 72.0 91 44.0
FvH4_6g24132 Fragaria vesca HOM05D003712 ORTHO05D004368 4.8e-11 71.2 53 56.6
FAN14G2952 Fragaria x ananassa HOM05D003712 ORTHO05D004368 4.8e-11 71.2 85 44.7
FAN14G3502 Fragaria x ananassa HOM05D003712 ORTHO05D004368 4.8e-11 71.2 85 44.7
Prupe.3G230400 Prunus persica HOM05D003712 ORTHO05D004368 6.3e-11 70.9 84 47.6
DCAR_004146 Daucus carota HOM05D003712 ORTHO05D004368 8.2e-11 70.5 80 48.8
Oeu032464.1 Olea europaea HOM05D003712 ORTHO05D004368 8.2e-11 70.5 88 42.0
Ciclev10003398m.g Citrus clementina HOM05D003712 ORTHO05D004368 1.1e-10 70.1 85 43.5
MD17G1084800 Malus domestica HOM05D003712 ORTHO05D004368 1.1e-10 70.1 84 50.0
Oeu006542.1 Olea europaea HOM05D003712 ORTHO05D004368 1.4e-10 69.7 83 42.2
Ciclev10003665m.g Citrus clementina HOM05D003712 ORTHO05D004368 1.8e-10 69.3 85 43.5
Peaxi162Scf00779g00018 Petunia axillaris HOM05D003712 ORTHO05D004368 1.8e-10 69.3 84 42.9
DCAR_008079 Daucus carota HOM05D003712 ORTHO05D004368 2.4e-10 68.9 76 48.7
DCAR_008081 Daucus carota HOM05D003712 ORTHO05D004368 2.4e-10 68.9 76 48.7
Hma1.2p1_0565F.1_g179590 Hydrangea macrophylla HOM05D003712 ORTHO05D004368 2.4e-10 68.9 85 43.5
RcHm_v2.0_Chr2g0161661 Rosa chinensis HOM05D003712 ORTHO05D004368 2.4e-10 68.9 55 50.9
RcHm_v2.0_Chr2g0161721 Rosa chinensis HOM05D003712 ORTHO05D004368 2.4e-10 68.9 55 50.9
Haze_06583 Corylus avellana HOM05D003712 ORTHO05D004368 4.1e-10 68.2 90 37.8
Glyma.07G190500 Glycine max HOM05D003712 ORTHO05D004368 4.1e-10 68.2 86 45.3
DCAR_024926 Daucus carota HOM05D003712 ORTHO05D004368 5.3e-10 67.8 87 44.8
FvH4_6g44841 Fragaria vesca HOM05D003712 ORTHO05D004368 5.3e-10 67.8 55 49.1
Manes.13G034200 Manihot esculenta HOM05D003712 ORTHO05D004368 5.3e-10 67.8 88 40.9
Potri.005G061780 Populus trichocarpa HOM05D003712 ORTHO05D004368 5.3e-10 67.8 85 42.4
Sed0020030 Sechium edule HOM05D003712 ORTHO05D004368 5.3e-10 67.8 85 40.0
FAN18G4187 Fragaria x ananassa HOM05D003712 ORTHO05D004368 6.9e-10 67.4 86 43.0
FvH4_5g34303 Fragaria vesca HOM05D003712 ORTHO05D004368 9.0e-10 67.0 86 43.0
Hma1.2p1_0565F.1_g179580 Hydrangea macrophylla HOM05D003712 ORTHO05D004368 9.0e-10 67.0 85 44.7
Cfa014527 Carpinus fangiana HOM05D003712 ORTHO05D004368 1.2e-09 66.6 86 40.7
Aqoxy4G02044 Aquilegia oxysepala HOM05D003712 ORTHO05D004368 1.5e-09 66.2 85 38.8
Aqoxy5G01667 Aquilegia oxysepala HOM05D003712 ORTHO05D004368 2.0e-09 65.9 85 41.2
arahy.Tifrunner.gnm1.ann1.UHMW3K Arachis hypogaea HOM05D003712 ORTHO05D004368 2.0e-09 65.9 91 40.7
DCAR_004147 Daucus carota HOM05D003712 ORTHO05D004368 2.0e-09 65.9 89 44.9
Hma1.2p1_0565F.1_g179610 Hydrangea macrophylla HOM05D003712 ORTHO05D004368 2.0e-09 65.9 85 40.0
Prupe.1G064500 Prunus persica HOM05D003712 ORTHO05D004368 2.0e-09 65.9 55 49.1
Actinidia24056 Actinidia chinensis HOM05D003712 ORTHO05D004368 2.6e-09 65.5 83 38.6
FAN08G3545 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.6e-09 65.5 84 42.9
Glyma.08G058700 Glycine max HOM05D003712 ORTHO05D004368 2.6e-09 65.5 80 46.2
Nitab4.5_0001871g0120 Nicotiana tabacum HOM05D003712 ORTHO05D004368 2.6e-09 65.5 60 43.3
Prupe.3G230900 Prunus persica HOM05D003712 ORTHO05D004368 2.6e-09 65.5 85 43.5
Aqoxy4G02036 Aquilegia oxysepala HOM05D003712 ORTHO05D004368 3.4e-09 65.1 79 40.5
COL.COLO4_06989 Corchorus olitorius HOM05D003712 ORTHO05D004368 3.4e-09 65.1 86 48.8
DCAR_004145 Daucus carota HOM05D003712 ORTHO05D004368 3.4e-09 65.1 80 47.5
Cpa.g.sc228.6 Carica papaya HOM05D003712 ORTHO05D004368 4.5e-09 64.7 84 41.7
FvH4_3g03881 Fragaria vesca HOM05D003712 ORTHO05D004368 4.5e-09 64.7 84 44.0
Nitab4.5_0002791g0030 Nicotiana tabacum HOM05D003712 ORTHO05D004368 4.5e-09 64.7 87 41.4
Nitab4.5_0008774g0010 Nicotiana tabacum HOM05D003712 ORTHO05D004368 4.5e-09 64.7 77 42.9
RcHm_v2.0_Chr5g0006151 Rosa chinensis HOM05D003712 ORTHO05D004368 4.5e-09 64.7 87 39.1
SalBow7G4100 Salvia bowleyana HOM05D003712 ORTHO05D004368 4.5e-09 64.7 81 46.9
Migut.M00335 Erythranthe guttata HOM05D003712 ORTHO05D004368 5.9e-09 64.3 83 36.1
Migut.M00336 Erythranthe guttata HOM05D003712 ORTHO05D004368 5.9e-09 64.3 85 37.6
Nitab4.5_0014858g0020 Nicotiana tabacum HOM05D003712 ORTHO05D004368 5.9e-09 64.3 87 37.9
Phvul.002G222400 Phaseolus vulgaris HOM05D003712 ORTHO05D004368 5.9e-09 64.3 86 44.2
SalBow8G4951 Salvia bowleyana HOM05D003712 ORTHO05D004368 5.9e-09 64.3 85 41.2
TPR.G32428 Trifolium pratense HOM05D003712 ORTHO05D004368 5.9e-09 64.3 77 48.1
TPR.G22155 Trifolium pratense HOM05D003712 ORTHO05D004368 7.6e-09 63.9 77 46.8
Migut.M00339 Erythranthe guttata HOM05D003712 ORTHO05D004368 1.0e-08 63.5 83 37.3
Potri.007G109600 Populus trichocarpa HOM05D003712 ORTHO05D004368 1.0e-08 63.5 84 40.5
FvH4_3g03882 Fragaria vesca HOM05D003712 ORTHO05D004368 1.3e-08 63.2 85 42.4
Prupe.4G037900 Prunus persica HOM05D003712 ORTHO05D004368 1.3e-08 63.2 81 40.7
Sed0026588 Sechium edule HOM05D003712 ORTHO05D004368 1.3e-08 63.2 84 41.7
Gorai.011G140900 Gossypium raimondii HOM05D003712 ORTHO05D004368 1.7e-08 62.8 83 39.8
Oeu006541.1 Olea europaea HOM05D003712 ORTHO05D004368 1.7e-08 62.8 83 36.1
FAN02G2973 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.2e-08 62.4 79 41.8
FAN14G3156 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.2e-08 62.4 49 46.9
FAN14G4046 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.2e-08 62.4 79 41.8
FAN16G1684 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.2e-08 62.4 89 42.7
Lj4g0026887 Lotus japonicus HOM05D003712 ORTHO05D004368 2.2e-08 62.4 75 44.0
Thecc.06G200700 Theobroma cacao HOM05D003712 ORTHO05D004368 2.2e-08 62.4 76 40.8
Aqoxy5G01666 Aquilegia oxysepala HOM05D003712 ORTHO05D004368 2.9e-08 62.0 85 40.0
FvH4_3g39481 Fragaria vesca HOM05D003712 ORTHO05D004368 2.9e-08 62.0 75 46.7
Medtr4g091020 Medicago truncatula HOM05D003712 ORTHO05D004368 2.9e-08 62.0 86 43.0
PGSC0003DMG400042227 Solanum tuberosum HOM05D003712 ORTHO05D004368 2.9e-08 62.0 70 40.0
TPR.G32437 Trifolium pratense HOM05D003712 ORTHO05D004368 2.9e-08 62.0 86 41.9
TAR626G1156 Trochodendron aralioides HOM05D003712 ORTHO05D004368 2.9e-08 62.0 83 41.0
FAN11G0545 Fragaria x ananassa HOM05D003712 ORTHO05D004368 3.8e-08 61.6 84 41.7
FAN16G2577 Fragaria x ananassa HOM05D003712 ORTHO05D004368 3.8e-08 61.6 84 41.7
Gohir.D10G127800 Gossypium hirsutum HOM05D003712 ORTHO05D004368 3.8e-08 61.6 83 38.6
Nitab4.5_0005389g0030 Nicotiana tabacum HOM05D003712 ORTHO05D004368 3.8e-08 61.6 90 37.8
Prupe.3G230700 Prunus persica HOM05D003712 ORTHO05D004368 3.8e-08 61.6 93 44.1
ClCG00G003850 Citrullus lanatus HOM05D003712 ORTHO05D004368 5.0e-08 61.2 45 51.1
ClCG01G022510 Citrullus lanatus HOM05D003712 ORTHO05D004368 5.0e-08 61.2 45 51.1
Dinv13825 Davidia involucrata HOM05D003712 ORTHO05D004368 5.0e-08 61.2 65 44.6
Nitab4.5_0005244g0050 Nicotiana tabacum HOM05D003712 ORTHO05D004368 5.0e-08 61.2 74 39.2
RcHm_v2.0_Chr7g0234891 Rosa chinensis HOM05D003712 ORTHO05D004368 5.0e-08 61.2 45 53.3
DCAR_004148 Daucus carota HOM05D003712 ORTHO05D004368 6.5e-08 60.8 51 45.1
QL01p014092 Quercus lobata HOM05D003712 ORTHO05D004368 6.5e-08 60.8 89 38.2
FAN11G3078 Fragaria x ananassa HOM05D003712 ORTHO05D004368 8.5e-08 60.5 77 46.8
MBI06_g08453_MAGBIO Magnolia biondii HOM05D003712 ORTHO05D004368 8.5e-08 60.5 85 38.8
MBI19_g03250_MAGBIO Magnolia biondii HOM05D000165 ORTHO05D008234 8.5e-08 60.5 45 46.7
TAR626G0105 Trochodendron aralioides HOM05D003712 ORTHO05D004368 8.5e-08 60.5 70 44.3
FAN25G2638 Fragaria x ananassa HOM05D003712 ORTHO05D004368 1.1e-07 60.1 49 49.0
Gohir.A10G139000 Gossypium hirsutum HOM05D003712 ORTHO05D004368 1.1e-07 60.1 83 37.3
Medtr4g091010 Medicago truncatula HOM05D003712 ORTHO05D004368 1.1e-07 60.1 80 42.5
Nitab4.5_0008654g0020 Nicotiana tabacum HOM05D003712 ORTHO05D004368 1.1e-07 60.1 79 35.4
FvH4_6g44545 Fragaria vesca HOM05D003712 ORTHO05D004368 1.4e-07 59.7 79 41.8
HanXRQChr05g0131191 Helianthus annuus HOM05D003712 ORTHO05D004368 1.4e-07 59.7 46 50.0
Os01g0783000 Oryza sativa ssp. japonica HOM05D003712 ORTHO05D004368 1.4e-07 59.7 47 53.2
Peaxi162Scf00779g00008 Petunia axillaris HOM05D003712 ORTHO05D004368 1.4e-07 59.7 75 45.3
RcHm_v2.0_Chr5g0071201 Rosa chinensis HOM05D003712 ORTHO05D004368 1.4e-07 59.7 91 41.8
PGSC0003DMG401022401 Solanum tuberosum HOM05D003712 ORTHO05D004368 1.4e-07 59.7 88 37.5
Haze_13069 Corylus avellana HOM05D003712 ORTHO05D004368 2.5e-07 58.9 85 37.6
CsaV3_6G049690 Cucumis sativus L. HOM05D003712 ORTHO05D004368 2.5e-07 58.9 87 36.8
Gohir.D10G127900 Gossypium hirsutum HOM05D003712 ORTHO05D004368 2.5e-07 58.9 86 33.7
Gorai.011G141000 Gossypium raimondii HOM05D003712 ORTHO05D004368 2.5e-07 58.9 86 33.7
MBI18_g37562_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.5e-07 58.9 91 37.4
Medtr4g091000 Medicago truncatula HOM05D003712 ORTHO05D004368 2.5e-07 58.9 46 54.3
FAN21G1388 Fragaria x ananassa HOM05D003712 ORTHO05D004368 3.2e-07 58.5 84 38.1
Nitab4.5_0000649g0020 Nicotiana tabacum HOM05D003712 ORTHO05D004368 3.2e-07 58.5 83 36.1
CiPaw.10G118000 Carya illinoinensis HOM05D003712 ORTHO05D004368 4.2e-07 58.2 80 36.2
ECA236G2370 Erigeron canadensis HOM05D003712 ORTHO05D004368 4.2e-07 58.2 45 51.1
FvH4_3g39491 Fragaria vesca HOM05D003712 ORTHO05D004368 4.2e-07 58.2 98 35.7
ClCG00G003860 Citrullus lanatus HOM05D003712 ORTHO05D004368 5.5e-07 57.8 81 34.6
ClCG01G022520 Citrullus lanatus HOM05D003712 ORTHO05D004368 5.5e-07 57.8 81 34.6
FAN16G2504 Fragaria x ananassa HOM05D003712 ORTHO05D004368 7.2e-07 57.4 53 49.1
HanXRQChr15g0488611 Helianthus annuus HOM05D003712 ORTHO05D004368 7.2e-07 57.4 78 34.6
HanXRQChr15g0488621 Helianthus annuus HOM05D003712 ORTHO05D004368 7.2e-07 57.4 78 34.6
FAN21G1030 Fragaria x ananassa HOM05D003712 ORTHO05D004368 9.3e-07 57.0 98 35.7
Peaxi162Scf00485g00072 Petunia axillaris HOM05D003712 ORTHO05D004368 9.3e-07 57.0 78 38.5
CsaV3_6G049680 Cucumis sativus L. HOM05D003712 ORTHO05D004368 1.2e-06 56.6 86 33.7
RcHm_v2.0_Chr5g0006161 Rosa chinensis HOM05D003712 ORTHO05D004368 1.2e-06 56.6 95 32.6
Actinidia11811 Actinidia chinensis HOM05D003712 ORTHO05D004368 1.6e-06 56.2 45 46.7
MBI18_g37563_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 56.2 51 41.2
Potri.005G224300 Populus trichocarpa HOM05D003712 ORTHO05D004368 1.6e-06 56.2 85 35.3
Zm00001eb369810 Zea mays HOM05D003712 ORTHO05D004368 1.6e-06 56.2 47 51.1
Actinidia09903 Actinidia chinensis HOM05D003712 ORTHO05D004368 2.1e-06 55.8 65 36.9
CANSAT56G2493 Cannabis sativa HOM05D003712 ORTHO05D004368 2.1e-06 55.8 47 42.6
FAN09G2580 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.1e-06 55.8 45 48.9
FAN25G3769 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.1e-06 55.8 98 34.7
Aqoxy4G02045 Aquilegia oxysepala HOM05D003712 ORTHO05D004368 2.7e-06 55.5 85 34.1
Gohir.A10G138900 Gossypium hirsutum HOM05D003712 ORTHO05D004368 2.7e-06 55.5 86 32.6
COL.COLO4_31595 Corchorus olitorius HOM05D003712 ORTHO05D004368 3.6e-06 55.1 75 34.7
Lsat_1_v5_gn_4_69400 Lactuca sativa HOM05D003712 ORTHO05D004368 3.6e-06 55.1 85 35.3
FvH4_6g44490 Fragaria vesca HOM05D003712 ORTHO05D004368 4.6e-06 54.7 39 51.3
RcHm_v2.0_Chr2g0161751 Rosa chinensis HOM05D003712 ORTHO05D004368 6.1e-06 54.3 79 36.7


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