Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0517551 Helianthus annuus HOM05D003712 ORTHO05D004368 5.3e-57 224.2 116 100.0
HanXRQChr16g0517561 Helianthus annuus HOM05D003712 ORTHO05D004368 2.2e-39 165.6 88 96.6
Lsat_1_v5_gn_4_56561 Lactuca sativa HOM05D003712 ORTHO05D004368 5.5e-30 134.4 93 71.0
Lsat_1_v5_gn_4_56721 Lactuca sativa HOM05D003712 ORTHO05D004368 5.5e-30 134.4 97 69.1
Lsat_1_v5_gn_4_56621 Lactuca sativa HOM05D003712 ORTHO05D004368 2.1e-29 132.5 97 68.0
Lsat_1_v5_gn_4_56541 Lactuca sativa HOM05D003712 ORTHO05D004368 6.1e-29 131.0 95 64.2
Lsat_1_v5_gn_4_56681 Lactuca sativa HOM05D003712 ORTHO05D004368 8.0e-29 130.6 93 68.8
Lsat_1_v5_gn_4_56741 Lactuca sativa HOM05D003712 ORTHO05D004368 8.8e-28 127.1 95 67.4
ECA234G4130 Erigeron canadensis HOM05D003712 ORTHO05D004368 6.1e-21 104.4 93 58.1
Migut.H01521 Erythranthe guttata HOM05D003712 ORTHO05D004368 6.3e-18 94.4 91 54.9
Eucgr.I00207 Eucalyptus grandis HOM05D003712 ORTHO05D004368 2.7e-16 89.0 99 47.5
Oeu032463.1 Olea europaea HOM05D003712 ORTHO05D004368 2.7e-16 89.0 93 46.2
Oeu006542.1 Olea europaea HOM05D003712 ORTHO05D004368 2.9e-15 85.5 92 45.7
FvH4_6g44501 Fragaria vesca HOM05D003712 ORTHO05D004368 1.1e-14 83.6 93 45.2
FAN14G5484 Fragaria x ananassa HOM05D003712 ORTHO05D004368 1.1e-14 83.6 93 45.2
DCAR_008077 Daucus carota HOM05D003712 ORTHO05D004368 1.5e-14 83.2 85 51.8
FAN02G1220 Fragaria x ananassa HOM05D003712 ORTHO05D004368 1.5e-14 83.2 87 43.7
Oeu032464.1 Olea europaea HOM05D003712 ORTHO05D004368 1.9e-14 82.8 92 45.7
FAN05G3297 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.5e-14 82.4 109 39.4
SalBow7G0868 Salvia bowleyana HOM05D003712 ORTHO05D004368 2.5e-14 82.4 88 46.6
Peaxi162Scf00779g00018 Petunia axillaris HOM05D003712 ORTHO05D004368 5.5e-14 81.3 91 44.0
FAN14G2952 Fragaria x ananassa HOM05D003712 ORTHO05D004368 7.2e-14 80.9 90 45.6
FAN14G3502 Fragaria x ananassa HOM05D003712 ORTHO05D004368 7.2e-14 80.9 90 45.6
Manes.12G082800 Manihot esculenta HOM05D003712 ORTHO05D004368 7.2e-14 80.9 90 42.2
Oeu006541.1 Olea europaea HOM05D003712 ORTHO05D004368 9.4e-14 80.5 92 42.4
Prupe.3G230500 Prunus persica HOM05D003712 ORTHO05D004368 9.4e-14 80.5 90 43.3
Potri.007G117900 Populus trichocarpa HOM05D003712 ORTHO05D004368 1.2e-13 80.1 91 47.3
Ciclev10017864m.g Citrus clementina HOM05D003712 ORTHO05D004368 1.6e-13 79.7 90 44.4
Ciclev10033348m.g Citrus clementina HOM05D003712 ORTHO05D004368 1.6e-13 79.7 90 43.3
Actinidia24056 Actinidia chinensis HOM05D003712 ORTHO05D004368 2.1e-13 79.3 88 42.0
FvH4_6g24132 Fragaria vesca HOM05D003712 ORTHO05D004368 2.7e-13 79.0 57 57.9
Potri.007G106900 Populus trichocarpa HOM05D003712 ORTHO05D004368 2.7e-13 79.0 91 45.1
RcHm_v2.0_Chr2g0161661 Rosa chinensis HOM05D003712 ORTHO05D004368 2.7e-13 79.0 60 53.3
RcHm_v2.0_Chr2g0161721 Rosa chinensis HOM05D003712 ORTHO05D004368 2.7e-13 79.0 60 53.3
Aqoxy5G01667 Aquilegia oxysepala HOM05D003712 ORTHO05D004368 3.6e-13 78.6 96 43.8
Haze_06583 Corylus avellana HOM05D003712 ORTHO05D004368 3.6e-13 78.6 84 44.0
Manes.13G034200 Manihot esculenta HOM05D003712 ORTHO05D004368 3.6e-13 78.6 90 41.1
DCAR_004146 Daucus carota HOM05D003712 ORTHO05D004368 4.7e-13 78.2 83 47.0
Migut.M00335 Erythranthe guttata HOM05D003712 ORTHO05D004368 6.1e-13 77.8 88 40.9
DCAR_008079 Daucus carota HOM05D003712 ORTHO05D004368 8.0e-13 77.4 81 50.6
DCAR_008081 Daucus carota HOM05D003712 ORTHO05D004368 8.0e-13 77.4 81 50.6
Migut.M00339 Erythranthe guttata HOM05D003712 ORTHO05D004368 8.0e-13 77.4 88 40.9
Glyma.07G190500 Glycine max HOM05D003712 ORTHO05D004368 8.0e-13 77.4 92 45.7
Potri.005G061780 Populus trichocarpa HOM05D003712 ORTHO05D004368 8.0e-13 77.4 90 43.3
FvH4_3g03882 Fragaria vesca HOM05D003712 ORTHO05D004368 1.0e-12 77.0 94 44.7
MD17G1084800 Malus domestica HOM05D003712 ORTHO05D004368 1.0e-12 77.0 91 46.2
DCAR_024926 Daucus carota HOM05D003712 ORTHO05D004368 1.4e-12 76.6 97 42.3
FAN18G4187 Fragaria x ananassa HOM05D003712 ORTHO05D004368 1.4e-12 76.6 91 45.1
Nitab4.5_0002791g0030 Nicotiana tabacum HOM05D003712 ORTHO05D004368 1.4e-12 76.6 90 41.1
Ciclev10003398m.g Citrus clementina HOM05D003712 ORTHO05D004368 1.8e-12 76.3 90 43.3
FvH4_5g34303 Fragaria vesca HOM05D003712 ORTHO05D004368 1.8e-12 76.3 91 45.1
Nitab4.5_0014858g0020 Nicotiana tabacum HOM05D003712 ORTHO05D004368 1.8e-12 76.3 90 40.0
Prupe.3G230400 Prunus persica HOM05D003712 ORTHO05D004368 1.8e-12 76.3 89 48.3
Cfa014527 Carpinus fangiana HOM05D003712 ORTHO05D004368 2.3e-12 75.9 92 41.3
COL.COLO4_06989 Corchorus olitorius HOM05D003712 ORTHO05D004368 2.3e-12 75.9 92 48.9
FvH4_6g44841 Fragaria vesca HOM05D003712 ORTHO05D004368 2.3e-12 75.9 60 50.0
Prupe.3G230600 Prunus persica HOM05D003712 ORTHO05D004368 2.3e-12 75.9 89 47.2
Aqoxy5G01666 Aquilegia oxysepala HOM05D003712 ORTHO05D004368 3.0e-12 75.5 91 45.1
DCAR_004145 Daucus carota HOM05D003712 ORTHO05D004368 3.0e-12 75.5 93 44.1
FvH4_3g03881 Fragaria vesca HOM05D003712 ORTHO05D004368 3.0e-12 75.5 91 46.2
Hma1.2p1_0565F.1_g179590 Hydrangea macrophylla HOM05D003712 ORTHO05D004368 3.0e-12 75.5 90 44.4
Nitab4.5_0001871g0120 Nicotiana tabacum HOM05D003712 ORTHO05D004368 3.0e-12 75.5 67 43.3
Nitab4.5_0005389g0030 Nicotiana tabacum HOM05D003712 ORTHO05D004368 3.0e-12 75.5 97 40.2
Sed0020030 Sechium edule HOM05D003712 ORTHO05D004368 3.0e-12 75.5 96 42.7
Phvul.002G222400 Phaseolus vulgaris HOM05D003712 ORTHO05D004368 4.0e-12 75.1 92 44.6
RcHm_v2.0_Chr5g0006151 Rosa chinensis HOM05D003712 ORTHO05D004368 4.0e-12 75.1 94 39.4
SalBow7G4100 Salvia bowleyana HOM05D003712 ORTHO05D004368 4.0e-12 75.1 88 46.6
Ciclev10003665m.g Citrus clementina HOM05D003712 ORTHO05D004368 5.2e-12 74.7 90 42.2
FAN21G1388 Fragaria x ananassa HOM05D003712 ORTHO05D004368 5.2e-12 74.7 91 42.9
Hma1.2p1_0565F.1_g179610 Hydrangea macrophylla HOM05D003712 ORTHO05D004368 5.2e-12 74.7 90 42.2
Potri.007G109600 Populus trichocarpa HOM05D003712 ORTHO05D004368 5.2e-12 74.7 89 42.7
PGSC0003DMG401022401 Solanum tuberosum HOM05D003712 ORTHO05D004368 5.2e-12 74.7 94 40.4
Dinv13825 Davidia involucrata HOM05D003712 ORTHO05D004368 6.8e-12 74.3 72 47.2
FAN08G3545 Fragaria x ananassa HOM05D003712 ORTHO05D004368 6.8e-12 74.3 89 44.9
Hma1.2p1_0565F.1_g179580 Hydrangea macrophylla HOM05D003712 ORTHO05D004368 6.8e-12 74.3 91 45.1
Prupe.1G064500 Prunus persica HOM05D003712 ORTHO05D004368 6.8e-12 74.3 62 48.4
DCAR_004147 Daucus carota HOM05D003712 ORTHO05D004368 1.2e-11 73.6 99 42.4
Nitab4.5_0008774g0010 Nicotiana tabacum HOM05D003712 ORTHO05D004368 1.2e-11 73.6 104 35.6
Glyma.08G058700 Glycine max HOM05D003712 ORTHO05D004368 1.5e-11 73.2 86 45.3
Lj4g0026887 Lotus japonicus HOM05D003712 ORTHO05D004368 1.5e-11 73.2 81 45.7
MBI06_g08453_MAGBIO Magnolia biondii HOM05D003712 ORTHO05D004368 1.5e-11 73.2 91 41.8
Prupe.4G037900 Prunus persica HOM05D003712 ORTHO05D004368 1.5e-11 73.2 86 37.2
Thecc.06G200700 Theobroma cacao HOM05D003712 ORTHO05D004368 1.5e-11 73.2 91 42.9
Aqoxy4G02044 Aquilegia oxysepala HOM05D003712 ORTHO05D004368 2.0e-11 72.8 91 37.4
Migut.M00336 Erythranthe guttata HOM05D003712 ORTHO05D004368 2.0e-11 72.8 89 39.3
FAN16G1684 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.0e-11 72.8 96 42.7
Gorai.011G140900 Gossypium raimondii HOM05D003712 ORTHO05D004368 2.0e-11 72.8 90 40.0
Prupe.3G230900 Prunus persica HOM05D003712 ORTHO05D004368 2.0e-11 72.8 94 42.6
TPR.G32428 Trifolium pratense HOM05D003712 ORTHO05D004368 2.0e-11 72.8 81 48.1
Gohir.D10G127900 Gossypium hirsutum HOM05D003712 ORTHO05D004368 2.6e-11 72.4 93 37.6
Gorai.011G141000 Gossypium raimondii HOM05D003712 ORTHO05D004368 2.6e-11 72.4 93 37.6
TPR.G22155 Trifolium pratense HOM05D003712 ORTHO05D004368 2.6e-11 72.4 81 46.9
TAR626G1156 Trochodendron aralioides HOM05D003712 ORTHO05D004368 2.6e-11 72.4 89 41.6
Cpa.g.sc228.6 Carica papaya HOM05D003712 ORTHO05D004368 3.4e-11 72.0 94 39.4
FAN16G2577 Fragaria x ananassa HOM05D003712 ORTHO05D004368 3.4e-11 72.0 100 35.0
Nitab4.5_0000649g0020 Nicotiana tabacum HOM05D003712 ORTHO05D004368 3.4e-11 72.0 90 38.9
FAN25G2638 Fragaria x ananassa HOM05D003712 ORTHO05D004368 4.4e-11 71.6 58 48.3
Gohir.D10G127800 Gossypium hirsutum HOM05D003712 ORTHO05D004368 4.4e-11 71.6 90 38.9
FvH4_3g39481 Fragaria vesca HOM05D003712 ORTHO05D004368 5.7e-11 71.2 80 48.8
FAN02G2973 Fragaria x ananassa HOM05D003712 ORTHO05D004368 5.7e-11 71.2 84 41.7
FAN14G4046 Fragaria x ananassa HOM05D003712 ORTHO05D004368 5.7e-11 71.2 84 41.7
Aqoxy4G02036 Aquilegia oxysepala HOM05D003712 ORTHO05D004368 7.5e-11 70.9 85 38.8
MBI18_g37562_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.5e-11 70.9 90 41.1
Peaxi162Scf00779g00008 Petunia axillaris HOM05D003712 ORTHO05D004368 7.5e-11 70.9 98 38.8
QL01p014092 Quercus lobata HOM05D003712 ORTHO05D004368 7.5e-11 70.9 96 38.5
Nitab4.5_0008654g0020 Nicotiana tabacum HOM05D003712 ORTHO05D004368 9.8e-11 70.5 84 38.1
RcHm_v2.0_Chr5g0006161 Rosa chinensis HOM05D003712 ORTHO05D004368 9.8e-11 70.5 102 35.3
RcHm_v2.0_Chr7g0234891 Rosa chinensis HOM05D003712 ORTHO05D004368 9.8e-11 70.5 50 56.0
Gohir.A10G139000 Gossypium hirsutum HOM05D003712 ORTHO05D004368 1.3e-10 70.1 90 37.8
Prupe.3G230700 Prunus persica HOM05D003712 ORTHO05D004368 1.3e-10 70.1 99 44.4
TPR.G32437 Trifolium pratense HOM05D003712 ORTHO05D004368 1.3e-10 70.1 92 41.3
arahy.Tifrunner.gnm1.ann1.UHMW3K Arachis hypogaea HOM05D003712 ORTHO05D004368 1.7e-10 69.7 90 42.2
Medtr4g091020 Medicago truncatula HOM05D003712 ORTHO05D004368 1.7e-10 69.7 92 42.4
SalBow8G4951 Salvia bowleyana HOM05D003712 ORTHO05D004368 1.7e-10 69.7 90 41.1
PGSC0003DMG400042227 Solanum tuberosum HOM05D003712 ORTHO05D004368 1.7e-10 69.7 74 40.5
FAN11G0545 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.2e-10 69.3 100 34.0
FAN11G3078 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.2e-10 69.3 82 48.8
Nitab4.5_0005244g0050 Nicotiana tabacum HOM05D003712 ORTHO05D004368 2.2e-10 69.3 79 40.5
Haze_13069 Corylus avellana HOM05D003712 ORTHO05D004368 3.7e-10 68.6 91 38.5
DCAR_004148 Daucus carota HOM05D003712 ORTHO05D004368 3.7e-10 68.6 56 46.4
FvH4_6g44545 Fragaria vesca HOM05D003712 ORTHO05D004368 3.7e-10 68.6 84 41.7
FAN14G3156 Fragaria x ananassa HOM05D003712 ORTHO05D004368 3.7e-10 68.6 90 37.8
CsaV3_6G049690 Cucumis sativus L. HOM05D003712 ORTHO05D004368 4.8e-10 68.2 93 37.6
MBI19_g03250_MAGBIO Magnolia biondii HOM05D000165 ORTHO05D008234 4.8e-10 68.2 51 45.1
Sed0026588 Sechium edule HOM05D003712 ORTHO05D004368 4.8e-10 68.2 88 40.9
Gohir.A10G138900 Gossypium hirsutum HOM05D003712 ORTHO05D004368 6.3e-10 67.8 93 35.5
Medtr4g091010 Medicago truncatula HOM05D003712 ORTHO05D004368 6.3e-10 67.8 86 41.9
Actinidia09903 Actinidia chinensis HOM05D003712 ORTHO05D004368 8.3e-10 67.4 70 41.4
RcHm_v2.0_Chr5g0071201 Rosa chinensis HOM05D003712 ORTHO05D004368 8.3e-10 67.4 88 43.2
ClCG00G003850 Citrullus lanatus HOM05D003712 ORTHO05D004368 1.1e-09 67.0 51 49.0
ClCG01G022510 Citrullus lanatus HOM05D003712 ORTHO05D004368 1.1e-09 67.0 51 49.0
FvH4_3g39491 Fragaria vesca HOM05D003712 ORTHO05D004368 1.1e-09 67.0 96 36.5
FAN09G2580 Fragaria x ananassa HOM05D003712 ORTHO05D004368 1.1e-09 67.0 50 52.0
Os01g0783000 Oryza sativa ssp. japonica HOM05D003712 ORTHO05D004368 1.1e-09 67.0 52 51.9
HanXRQChr05g0131191 Helianthus annuus HOM05D003712 ORTHO05D004368 1.4e-09 66.6 50 52.0
TAR626G0105 Trochodendron aralioides HOM05D003712 ORTHO05D004368 1.4e-09 66.6 89 39.3
Aqoxy4G02045 Aquilegia oxysepala HOM05D003712 ORTHO05D004368 1.8e-09 66.2 94 36.2
FAN16G2504 Fragaria x ananassa HOM05D003712 ORTHO05D004368 1.8e-09 66.2 58 51.7
Medtr4g091000 Medicago truncatula HOM05D003712 ORTHO05D004368 1.8e-09 66.2 50 54.0
FAN25G3769 Fragaria x ananassa HOM05D003712 ORTHO05D004368 2.4e-09 65.9 94 36.2
ClCG00G003860 Citrullus lanatus HOM05D003712 ORTHO05D004368 3.1e-09 65.5 88 34.1
ClCG01G022520 Citrullus lanatus HOM05D003712 ORTHO05D004368 3.1e-09 65.5 88 34.1
ECA236G2370 Erigeron canadensis HOM05D003712 ORTHO05D004368 3.1e-09 65.5 50 50.0
FAN21G1030 Fragaria x ananassa HOM05D003712 ORTHO05D004368 3.1e-09 65.5 94 36.2
HanXRQChr15g0488611 Helianthus annuus HOM05D003712 ORTHO05D004368 3.1e-09 65.5 82 37.8
HanXRQChr15g0488621 Helianthus annuus HOM05D003712 ORTHO05D004368 3.1e-09 65.5 82 37.8
Lsat_1_v5_gn_4_69400 Lactuca sativa HOM05D003712 ORTHO05D004368 4.1e-09 65.1 89 34.8
Peaxi162Scf00089g01522 Petunia axillaris HOM05D003712 ORTHO05D004368 4.1e-09 65.1 93 36.6
Actinidia11811 Actinidia chinensis HOM05D003712 ORTHO05D004368 5.4e-09 64.7 50 50.0
Peaxi162Scf00485g00072 Petunia axillaris HOM05D003712 ORTHO05D004368 5.4e-09 64.7 92 34.8
CiPaw.10G118000 Carya illinoinensis HOM05D003712 ORTHO05D004368 7.0e-09 64.3 86 38.4
FAN25G1764 Fragaria x ananassa HOM05D003712 ORTHO05D004368 7.0e-09 64.3 110 33.6
CsaV3_6G049680 Cucumis sativus L. HOM05D003712 ORTHO05D004368 9.1e-09 63.9 93 33.3
Gohir.D06G128000 Gossypium hirsutum HOM05D003712 ORTHO05D004368 1.2e-08 63.5 89 36.0
Gorai.010G149700 Gossypium raimondii HOM05D003712 ORTHO05D004368 1.2e-08 63.5 89 36.0
Zm00001eb369810 Zea mays HOM05D003712 ORTHO05D004368 1.2e-08 63.5 52 50.0
Nitab4.5_0002956g0080 Nicotiana tabacum HOM05D003712 ORTHO05D004368 1.6e-08 63.2 83 34.9
Potri.005G224300 Populus trichocarpa HOM05D003712 ORTHO05D004368 1.6e-08 63.2 90 34.4
DCAR_012976 Daucus carota HOM05D003712 ORTHO05D004368 2.0e-08 62.8 53 45.3
FvH4_6g44490 Fragaria vesca HOM05D003712 ORTHO05D004368 2.0e-08 62.8 44 52.3
FvH4_5g02870 Fragaria vesca HOM05D003712 ORTHO05D004368 2.7e-08 62.4 94 39.4
Nitab4.5_0001871g0080 Nicotiana tabacum HOM05D003712 ORTHO05D004368 2.7e-08 62.4 83 34.9
COL.COLO4_31595 Corchorus olitorius HOM05D003712 ORTHO05D004368 3.5e-08 62.0 89 34.8
Gohir.A06G127300 Gossypium hirsutum HOM05D003712 ORTHO05D004368 3.5e-08 62.0 87 34.5
TWI18G1344 Tripterygium wilfordii HOM05D003712 ORTHO05D004368 3.5e-08 62.0 49 51.0
Eucgr.E03691 Eucalyptus grandis HOM05D003712 ORTHO05D004368 4.5e-08 61.6 89 37.1
Potri.002G038350 Populus trichocarpa HOM05D003712 ORTHO05D004368 7.7e-08 60.8 75 36.0
RcHm_v2.0_Chr2g0161751 Rosa chinensis HOM05D003712 ORTHO05D004368 7.7e-08 60.8 84 35.7
CiPaw.07G040700 Carya illinoinensis HOM05D003712 ORTHO05D004368 1.0e-07 60.5 91 35.2
Os01g0782901 Oryza sativa ssp. japonica HOM05D003712 ORTHO05D004368 1.0e-07 60.5 58 48.3
MD09G1090300 Malus domestica HOM05D003712 ORTHO05D004368 1.3e-07 60.1 100 35.0
CANSAT56G2493 Cannabis sativa HOM05D003712 ORTHO05D004368 1.7e-07 59.7 104 30.8
FAN18G2182 Fragaria x ananassa HOM05D003712 ORTHO05D004368 1.7e-07 59.7 94 38.3
Solyc07g054710.2 Solanum lycopersicum HOM05D003712 ORTHO05D004368 1.7e-07 59.7 98 31.6
ATR0693G124 Amborella trichopoda HOM05D003712 ORTHO05D004368 2.3e-07 59.3 89 34.8
Lj4g0012776 Lotus japonicus HOM05D003712 ORTHO05D004368 6.6e-07 57.8 92 34.8
Nitab4.5_0002956g0060 Nicotiana tabacum HOM05D003712 ORTHO05D004368 8.6e-07 57.4 87 32.2
Solyc07g054700.3 Solanum lycopersicum HOM05D003712 ORTHO05D004368 8.6e-07 57.4 116 30.2
MBI18_g37563_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-06 56.2 51 41.2
Nitab4.5_0004216g0020 Nicotiana tabacum HOM05D003712 ORTHO05D004368 2.5e-06 55.8 41 46.3
FAN18G0797 Fragaria x ananassa HOM05D003712 ORTHO05D004368 7.2e-06 54.3 92 34.8
DCAR_028776 Daucus carota HOM05D003712 ORTHO05D004368 9.5e-06 53.9 91 26.4


User provided reference genes

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