Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 2.3e-72 275.4 133 100.0
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 6.7e-56 220.7 122 90.2
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 1.0e-48 196.8 120 79.2
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 5.1e-48 194.5 118 79.7
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.1e-45 186.8 127 68.5
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 7.0e-45 184.1 121 70.2
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 5.9e-44 181.0 120 69.2
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 5.9e-44 181.0 118 70.3
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.0e-43 180.3 127 65.4
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 1.3e-43 179.9 118 72.0
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 1.3e-43 179.9 118 69.5
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.2e-43 179.1 127 64.6
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 2.9e-43 178.7 121 68.6
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 5.0e-43 177.9 119 69.7
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 5.0e-43 177.9 123 66.7
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 1.1e-42 176.8 124 67.7
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 1.1e-42 176.8 127 63.8
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 1.1e-42 176.8 124 66.1
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 1.4e-42 176.4 127 63.0
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 1.4e-42 176.4 118 68.6
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 1.9e-42 176.0 126 64.3
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.9e-42 176.0 120 67.5
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.5e-42 175.6 129 62.8
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 4.2e-42 174.9 123 66.7
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 5.5e-42 174.5 127 65.4
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 7.2e-42 174.1 124 66.1
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 7.2e-42 174.1 120 65.0
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 7.2e-42 174.1 123 65.9
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 9.4e-42 173.7 123 66.7
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 9.4e-42 173.7 126 65.1
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 9.4e-42 173.7 124 67.7
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.2e-41 173.3 125 64.8
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 1.2e-41 173.3 117 67.5
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 1.6e-41 172.9 117 68.4
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 2.1e-41 172.6 125 64.0
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 2.1e-41 172.6 117 66.7
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.7e-41 172.2 126 63.5
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 2.7e-41 172.2 118 66.9
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 2.7e-41 172.2 117 65.8
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 3.6e-41 171.8 124 64.5
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 3.6e-41 171.8 123 65.9
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 4.7e-41 171.4 125 63.2
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 4.7e-41 171.4 117 67.5
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 6.1e-41 171.0 124 62.1
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 6.1e-41 171.0 118 67.8
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 1.0e-40 170.2 123 67.5
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 1.0e-40 170.2 118 66.1
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 1.0e-40 170.2 118 65.3
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 2.3e-40 169.1 122 66.4
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 3.0e-40 168.7 121 65.3
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 3.0e-40 168.7 118 64.4
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 3.9e-40 168.3 118 66.1
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 3.9e-40 168.3 118 65.3
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 3.9e-40 168.3 124 62.9
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 5.2e-40 167.9 118 65.3
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 6.7e-40 167.5 118 64.4
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 8.8e-40 167.2 118 66.1
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 1.1e-39 166.8 117 62.4
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 1.1e-39 166.8 125 62.4
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 3.3e-39 165.2 114 66.7
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 3.3e-39 165.2 118 63.6
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.3e-39 165.2 117 65.0
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.3e-39 165.2 117 65.0
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 3.3e-39 165.2 118 66.1
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 3.3e-39 165.2 118 66.1
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 4.4e-39 164.9 117 63.2
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 4.4e-39 164.9 124 63.7
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 7.4e-39 164.1 114 64.9
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 7.4e-39 164.1 117 64.1
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 7.4e-39 164.1 117 64.1
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 1.3e-38 163.3 113 66.4
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 2.2e-38 162.5 114 64.9
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 2.2e-38 162.5 114 64.9
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 2.2e-38 162.5 114 64.9
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 2.2e-38 162.5 114 64.9
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 2.2e-38 162.5 114 64.9
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.2e-38 162.5 117 63.2
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 2.2e-38 162.5 127 58.3
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 2.8e-38 162.2 123 63.4
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 3.7e-38 161.8 112 63.4
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 4.8e-38 161.4 114 64.9
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 8.2e-38 160.6 117 63.2
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 8.2e-38 160.6 123 61.8
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 1.1e-37 160.2 124 63.7
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 1.1e-37 160.2 111 66.7
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 2.4e-37 159.1 126 59.5
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 2.4e-37 159.1 123 64.2
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 3.1e-37 158.7 113 63.7
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 5.3e-37 157.9 121 61.2
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 5.3e-37 157.9 112 66.1
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 5.3e-37 157.9 112 66.1
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 1.2e-36 156.8 118 63.6
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 2.6e-36 155.6 122 59.8
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 2.6e-36 155.6 122 58.2
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 3.5e-36 155.2 120 60.8
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 4.5e-36 154.8 122 58.2
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 7.7e-36 154.1 122 58.2
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 7.7e-36 154.1 128 58.6
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 1.7e-35 152.9 122 57.4
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 1.7e-35 152.9 113 62.8
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 2.9e-35 152.1 120 56.7
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 6.5e-35 151.0 124 57.3
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 6.5e-35 151.0 124 57.3
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 8.5e-35 150.6 108 63.0
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 2.5e-34 149.1 125 56.8
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 3.2e-34 148.7 114 60.5
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 4.2e-34 148.3 124 56.5
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 1.2e-33 146.7 114 58.8
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.2e-31 140.2 193 39.4
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 6.3e-30 134.4 128 50.8
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.2e-26 122.1 121 51.2
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 1.3e-14 83.6 86 43.0
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 1.2e-09 67.0 102 38.2
HanXRQChr10g0291701 Helianthus annuus HOM05D006861 ORTHO05D008620 3.6e-09 65.5 108 38.9
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 8.3e-06 54.3 112 31.2


User provided reference genes

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