Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 2.7e-150 535.4 294 100.0
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 1.0e-72 277.7 331 52.9
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 3.8e-43 179.5 186 56.5
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.0e-40 171.4 147 61.9
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 7.2e-34 148.7 290 38.3
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.8e-32 144.1 281 43.1
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 2.5e-31 140.2 288 38.2
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 2.8e-30 136.7 292 42.8
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 2.8e-30 136.7 299 34.8
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 6.3e-30 135.6 298 35.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.2e-30 135.2 296 42.2
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 1.1e-29 134.8 291 39.2
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.1e-29 134.8 298 37.9
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.8e-29 134.0 288 36.1
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 4.1e-29 132.9 294 37.4
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 7.7e-28 128.6 294 36.1
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.7e-27 127.5 290 36.2
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 2.9e-27 126.7 290 35.5
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.8e-27 126.3 298 39.3
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.8e-27 126.3 283 35.3
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 5.0e-27 125.9 292 34.2
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 1.1e-26 124.8 289 37.7
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 1.1e-26 124.8 291 35.4
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.1e-26 124.8 293 35.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.9e-26 124.0 291 35.1
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.9e-26 124.0 291 35.1
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 3.2e-26 123.2 293 35.8
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.2e-26 123.2 287 34.8
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 3.2e-26 123.2 291 35.4
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 3.2e-26 123.2 292 34.6
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 7.2e-26 122.1 291 36.1
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 7.2e-26 122.1 284 35.2
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.2e-25 121.3 288 34.4
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.6e-25 120.9 293 38.6
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.1e-25 120.6 283 36.0
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.7e-25 120.2 259 37.5
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.7e-25 120.2 290 33.8
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 2.7e-25 120.2 135 51.1
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 2.7e-25 120.2 283 33.6
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 3.6e-25 119.8 300 33.7
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 4.6e-25 119.4 291 37.1
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 4.6e-25 119.4 295 34.9
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 7.9e-25 118.6 284 36.3
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.4e-24 117.9 298 37.9
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.4e-24 117.9 298 37.9
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 3.9e-24 116.3 311 32.8
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.5e-23 114.4 287 36.2
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 2.0e-23 114.0 293 34.1
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 2.6e-23 113.6 291 34.7
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 5.7e-23 112.5 288 35.8
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 5.7e-23 112.5 289 32.9
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 1.7e-22 110.9 290 34.5
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 3.7e-22 109.8 307 34.9
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 3.7e-22 109.8 283 33.2
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 6.3e-22 109.0 282 35.1
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.8e-21 107.5 293 31.7
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 2.4e-21 107.1 289 32.5
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 3.1e-21 106.7 266 31.2
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 4.1e-21 106.3 283 34.6
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 6.9e-21 105.5 134 50.0
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 9.1e-21 105.1 284 33.5
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.5e-20 104.4 288 31.9
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 2.6e-20 103.6 297 33.3
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 3.4e-20 103.2 282 33.0
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 3.4e-20 103.2 290 34.8
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 3.4e-20 103.2 301 31.6
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 3.4e-20 103.2 289 36.3
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 5.9e-20 102.4 295 31.9
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.7e-20 102.1 293 37.2
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.3e-19 101.3 293 37.2
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.7e-19 100.9 293 37.2
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.9e-19 100.1 288 33.7
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 5.0e-19 99.4 157 40.8
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 1.9e-18 97.4 291 30.6
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 2.5e-18 97.1 283 31.8
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 3.2e-18 96.7 278 30.9
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 4.2e-18 96.3 299 30.1
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 4.2e-18 96.3 297 30.6
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 5.5e-18 95.9 299 31.4
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 5.5e-18 95.9 297 33.3
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 2.7e-17 93.6 299 31.1
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.7e-17 93.6 280 32.9
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 7.9e-17 92.0 284 33.5
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.0e-16 91.7 288 29.2
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 1.8e-16 90.9 298 31.2
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.8e-16 90.9 286 32.2
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.3e-16 90.5 293 31.1
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 3.0e-16 90.1 256 36.3
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 5.2e-16 89.4 288 30.9
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.5e-15 87.8 183 33.3
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.0e-15 87.4 304 28.9
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 3.3e-15 86.7 171 38.6
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 5.7e-15 85.9 286 30.4
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 7.4e-15 85.5 299 31.1
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.7e-14 84.3 305 33.4
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 4.8e-14 82.8 254 28.7
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 4.8e-14 82.8 166 36.7
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 6.3e-14 82.4 365 26.6
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.8e-13 80.9 296 27.0
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 2.4e-13 80.5 324 30.2
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 2.4e-13 80.5 287 34.1
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 3.5e-12 76.6 296 26.0
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.7e-11 74.3 296 29.7
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 5.0e-11 72.8 298 29.9
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 6.5e-11 72.4 292 27.1
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 6.5e-11 72.4 151 37.7
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 6.5e-11 72.4 140 37.1
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 6.5e-11 72.4 140 37.1
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 6.5e-11 72.4 151 37.7
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 6.5e-11 72.4 219 28.8
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.2e-09 68.2 265 28.3
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 3.6e-09 66.6 279 31.5
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 6.1e-09 65.9 70 51.4
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.5e-07 61.2 105 39.0
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 3.3e-07 60.1 82 43.9
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 6.3e-06 55.8 129 34.9
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 8.2e-06 55.5 137 32.1


User provided reference genes

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