Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 8.1e-104 380.6 212 100.0
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 2.4e-55 219.5 220 62.7
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 3.1e-47 192.6 200 62.0
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 4.5e-38 162.2 221 50.2
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 1.0e-37 161.0 219 47.9
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 2.9e-37 159.5 217 49.8
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 5.0e-37 158.7 197 50.8
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 1.1e-36 157.5 223 48.0
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 7.2e-36 154.8 228 46.1
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 7.2e-36 154.8 199 49.2
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 1.2e-35 154.1 192 51.0
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 2.7e-35 152.9 206 49.5
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 3.6e-35 152.5 197 49.2
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 3.0e-34 149.4 201 48.3
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 8.8e-34 147.9 195 48.7
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 1.5e-33 147.1 228 46.1
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 1.5e-33 147.1 216 47.2
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 4.4e-33 145.6 218 46.3
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 4.4e-33 145.6 218 45.9
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 5.7e-33 145.2 227 47.6
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 5.7e-33 145.2 200 47.5
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 1.7e-32 143.7 214 48.6
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 1.7e-32 143.7 214 47.2
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 2.8e-32 142.9 200 49.5
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 3.7e-32 142.5 201 49.8
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 3.7e-32 142.5 217 47.5
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 4.8e-32 142.1 200 48.0
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 4.8e-32 142.1 215 47.9
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 6.3e-32 141.7 193 49.2
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 6.3e-32 141.7 218 45.9
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 8.2e-32 141.4 182 50.5
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 8.2e-32 141.4 198 49.0
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 8.2e-32 141.4 223 48.0
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 1.4e-31 140.6 213 46.5
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 1.4e-31 140.6 216 47.2
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 1.8e-31 140.2 180 48.3
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 2.4e-31 139.8 199 48.2
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 2.4e-31 139.8 224 44.2
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 9.1e-31 137.9 196 47.4
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 2.7e-30 136.3 189 48.1
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 3.5e-30 136.0 213 44.6
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 3.5e-30 136.0 194 47.9
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 4.5e-30 135.6 204 47.1
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 7.7e-30 134.8 212 44.3
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 7.7e-30 134.8 212 44.3
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 1.0e-29 134.4 214 46.7
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 1.3e-29 134.0 192 47.4
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 1.7e-29 133.7 175 52.0
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 1.7e-29 133.7 194 49.0
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 2.2e-29 133.3 210 44.3
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 2.9e-29 132.9 205 46.3
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 2.9e-29 132.9 189 48.1
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 2.9e-29 132.9 199 49.2
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 3.8e-29 132.5 194 48.5
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 5.0e-29 132.1 216 46.3
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 8.5e-29 131.3 207 45.4
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 8.5e-29 131.3 208 44.2
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 1.1e-28 131.0 168 53.6
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 1.5e-28 130.6 182 50.5
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 1.5e-28 130.6 201 47.3
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 1.9e-28 130.2 181 48.6
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 3.2e-28 129.4 202 45.5
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 5.5e-28 128.6 205 43.4
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 5.5e-28 128.6 202 44.6
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 1.6e-27 127.1 209 44.0
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 2.1e-27 126.7 207 44.4
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 2.1e-27 126.7 210 43.8
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 2.7e-27 126.3 206 43.7
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 3.6e-27 125.9 211 42.2
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 3.6e-27 125.9 180 47.2
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 3.6e-27 125.9 192 45.3
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 4.7e-27 125.6 180 47.2
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 1.0e-26 124.4 209 41.6
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 1.8e-26 123.6 227 42.3
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 2.3e-26 123.2 204 44.6
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 2.3e-26 123.2 190 43.7
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 4.0e-26 122.5 210 44.3
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 4.0e-26 122.5 204 43.6
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 5.2e-26 122.1 184 46.7
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 5.2e-26 122.1 192 45.8
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 5.2e-26 122.1 200 42.0
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 8.8e-26 121.3 192 43.8
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 1.2e-25 120.9 185 44.3
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 1.5e-25 120.6 195 44.1
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.5e-25 120.6 180 46.7
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 1.5e-25 120.6 180 45.0
Sc15g0004230 Simmondsia chinensis HOM05D006240 ORTHO05D007709 2.0e-25 120.2 170 50.0
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 2.6e-25 119.8 207 42.5
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 3.4e-25 119.4 187 45.5
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 3.4e-25 119.4 187 45.5
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 3.4e-25 119.4 214 42.5
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 4.4e-25 119.0 211 43.1
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 7.5e-25 118.2 209 43.1
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 7.5e-25 118.2 199 45.2
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 9.8e-25 117.9 201 42.8
Cfa014112 Carpinus fangiana HOM05D006240 ORTHO05D007709 1.3e-24 117.5 166 48.8
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 2.2e-24 116.7 187 44.9
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 1.4e-23 114.0 178 46.6
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 1.8e-23 113.6 210 39.5
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 3.1e-23 112.8 210 42.9
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 3.1e-23 112.8 185 43.8
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 4.1e-23 112.5 187 41.2
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 5.4e-23 112.1 209 42.6
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 1.2e-22 110.9 192 41.1
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 2.7e-22 109.8 204 40.2
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 2.2e-21 106.7 200 44.0
Eucgr.K03289 Eucalyptus grandis HOM05D006240 ORTHO05D007709 3.8e-21 105.9 232 39.7
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 7.2e-20 101.7 259 35.5
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 1.2e-19 100.9 213 39.0
SGA_v2.0_scaffold54G19644 Striga asiatica HOM05D006240 ORTHO05D007709 4.1e-15 85.9 294 31.0
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 2.7e-14 83.2 138 42.0
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 7.7e-14 81.6 178 37.1
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 1.3e-13 80.9 151 39.7
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 1.1e-12 77.8 116 39.7
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.5e-12 77.4 116 41.4
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 2.8e-11 73.2 189 33.9
Atru.chr3.2559 Acer truncatum HOM05D006240 ORTHO05D007709 8.9e-10 68.2 80 51.2
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 9.8e-09 64.7 97 46.4
Atru.chr9.2243 Acer truncatum HOM05D006240 ORTHO05D007709 1.3e-08 64.3 77 50.6
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 1.4e-07 60.8 66 54.5
SEGI_13318 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 1.6e-06 57.4 55 54.5


User provided reference genes

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