Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 5.0e-271 937.2 475 100.0
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 1.8e-204 716.1 493 74.0
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 6.1e-192 674.5 484 69.2
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 1.1e-174 617.1 495 63.8
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 1.3e-173 613.6 534 60.7
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 4.5e-171 605.1 495 63.4
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 5.9e-171 604.7 493 62.5
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 1.7e-170 603.2 493 64.5
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.0e-170 601.7 493 62.9
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 8.5e-170 600.9 494 61.1
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.1e-169 600.5 497 62.6
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 1.5e-169 600.1 496 62.7
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 2.5e-169 599.4 496 62.3
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.2e-168 597.0 496 60.9
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 3.6e-168 595.5 495 60.8
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 5.7e-166 588.2 496 61.5
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 5.7e-166 588.2 509 60.3
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 9.7e-166 587.4 495 60.8
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 1.7e-165 586.6 536 56.2
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 2.8e-165 585.9 496 61.3
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 6.3e-165 584.7 495 61.2
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 6.3e-165 584.7 495 61.2
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 6.3e-165 584.7 495 60.6
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 9.1e-164 580.9 494 61.1
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 3.5e-163 578.9 494 60.1
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 5.9e-163 578.2 496 59.5
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.9e-162 575.9 497 61.0
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 3.8e-162 575.5 513 59.1
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 5.0e-162 575.1 494 59.5
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 6.5e-162 574.7 493 57.8
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 1.1e-161 573.9 495 61.4
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 5.5e-161 571.6 495 60.6
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 2.1e-160 569.7 497 61.2
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 6.1e-160 568.2 497 60.8
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 1.4e-159 567.0 493 61.5
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 1.8e-159 566.6 494 60.5
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 3.0e-159 565.8 494 59.9
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 8.8e-159 564.3 495 60.2
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 8.8e-159 564.3 495 60.0
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 1.2e-158 563.9 491 58.2
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 1.2e-158 563.9 494 60.1
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 3.4e-158 562.4 499 59.9
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 5.7e-158 561.6 498 59.0
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 5.7e-158 561.6 491 59.1
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 7.5e-158 561.2 496 56.9
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.3e-157 560.5 494 58.1
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 2.2e-157 559.7 494 56.3
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 2.8e-157 559.3 506 58.1
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 8.3e-157 557.8 494 56.7
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 1.4e-156 557.0 494 58.7
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 1.8e-156 556.6 495 59.2
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 3.1e-156 555.8 495 56.4
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 5.4e-156 555.1 495 56.4
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 5.4e-156 555.1 491 59.5
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 7.0e-156 554.7 494 56.5
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 1.6e-155 553.5 497 57.1
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 7.7e-155 551.2 500 56.6
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.0e-154 550.8 493 56.2
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 1.0e-154 550.8 490 58.6
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 1.3e-154 550.4 494 55.9
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 1.3e-154 550.4 499 57.7
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 2.2e-154 549.7 495 56.4
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 2.9e-154 549.3 497 56.7
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 6.5e-154 548.1 498 57.0
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 6.5e-154 548.1 496 55.8
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 2.5e-153 546.2 494 55.9
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 2.5e-153 546.2 491 58.9
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 4.2e-153 545.4 503 54.9
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 9.5e-153 544.3 497 57.3
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 3.6e-152 542.3 461 62.0
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 6.1e-152 541.6 491 57.4
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 8.0e-152 541.2 491 55.0
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 8.0e-152 541.2 491 55.0
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 3.0e-151 539.3 532 55.3
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 1.5e-150 537.0 494 54.9
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 2.6e-150 536.2 490 54.3
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 7.5e-150 534.6 497 56.5
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.8e-149 532.7 505 57.4
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 7.0e-148 528.1 562 50.0
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 9.2e-148 527.7 494 57.3
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.0e-147 526.6 526 54.9
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 7.8e-147 524.6 497 56.9
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 1.7e-146 523.5 456 63.2
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 1.7e-146 523.5 486 57.0
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 1.5e-142 510.4 410 64.6
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 2.0e-142 510.0 451 61.6
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 6.4e-141 505.0 462 55.6
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 9.5e-137 491.1 490 54.1
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 4.7e-136 488.8 496 52.2
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.3e-133 480.7 574 47.7
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 1.4e-132 477.2 447 56.4
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 1.3e-130 470.7 512 49.8
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 1.7e-125 453.8 458 56.6
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 3.2e-124 449.5 514 49.4
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.1e-119 434.5 489 48.1
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 4.0e-119 432.6 339 65.2
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 4.4e-118 429.1 389 58.1
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 4.1e-116 422.5 506 45.7
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 5.1e-114 415.6 466 47.2
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 4.3e-105 386.0 495 43.4
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.2e-94 351.3 360 55.3
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 1.3e-93 347.8 508 40.6
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 7.4e-89 332.0 325 54.8
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 6.5e-85 318.9 361 49.9
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.3e-81 306.6 302 54.3
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 2.6e-78 297.0 372 46.0
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 2.6e-78 297.0 409 44.5
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 1.3e-77 294.7 303 50.2
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 1.9e-76 290.8 340 45.6
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 8.8e-66 255.4 231 59.7
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 1.1e-65 255.0 286 50.3
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 2.6e-65 253.8 357 42.9
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 5.7e-65 252.7 441 36.5
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 6.7e-58 229.2 180 62.8
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.4e-55 220.7 182 60.4
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 2.5e-52 210.7 355 38.6
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 7.5e-49 199.1 533 29.8
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 1.2e-41 175.3 135 65.9
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.9e-36 157.9 118 66.9
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.9e-36 157.9 118 66.9
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 1.4e-34 151.8 135 58.5
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.5e-30 137.1 192 40.6
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 6.6e-29 132.9 480 27.7
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 8.0e-19 99.4 131 42.7
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 8.0e-19 99.4 214 34.6
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 2.2e-16 91.3 60 66.7
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 2.2e-16 91.3 60 66.7
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 5.4e-15 86.7 44 84.1
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 5.4e-15 86.7 45 82.2
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 4.6e-14 83.6 44 81.8
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 7.8e-14 82.8 65 60.0
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.0e-13 80.9 51 68.6
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 1.9e-12 78.2 65 53.8
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 8.3e-08 62.8 116 37.1


User provided reference genes

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