Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 1.4e-201 706.1 363 100.0
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 4.7e-136 488.4 373 67.6
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 1.6e-131 473.4 365 67.7
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 4.3e-113 412.1 341 62.8
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 7.6e-110 401.4 294 66.3
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 7.8e-107 391.3 288 65.6
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 1.7e-106 390.2 313 61.0
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 8.7e-106 387.9 313 60.7
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 1.5e-105 387.1 295 61.7
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 5.6e-105 385.2 328 57.0
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 5.6e-105 385.2 297 61.6
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 2.1e-104 383.3 361 54.8
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 2.1e-104 383.3 358 55.9
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 1.1e-103 380.9 324 59.6
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 3.1e-103 379.4 326 59.2
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 6.9e-103 378.3 323 60.4
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 1.2e-102 377.5 358 55.3
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 1.5e-102 377.1 344 55.5
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 2.0e-102 376.7 326 59.8
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 5.8e-102 375.2 339 55.5
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 7.6e-102 374.8 358 55.3
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 1.3e-101 374.0 330 57.3
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 1.7e-101 373.6 322 58.7
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.7e-101 373.6 330 56.7
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 2.2e-101 373.2 324 59.9
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 2.2e-101 373.2 275 65.5
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 4.9e-101 372.1 285 63.5
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 3.2e-100 369.4 347 55.3
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 7.1e-100 368.2 336 55.4
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 9.3e-100 367.9 343 54.2
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 9.3e-100 367.9 347 55.9
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 3.5e-99 365.9 335 55.5
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 3.5e-99 365.9 334 57.2
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 6.0e-99 365.2 297 59.6
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 1.0e-98 364.4 362 53.9
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 1.3e-98 364.0 326 56.7
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 3.0e-98 362.8 341 54.0
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 3.9e-98 362.5 338 54.7
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 6.6e-98 361.7 347 54.5
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 8.7e-98 361.3 351 54.1
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.1e-97 360.9 297 58.2
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 1.5e-97 360.5 337 53.1
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 1.5e-97 360.5 340 55.9
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 6.2e-96 355.1 350 53.4
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 1.1e-95 354.4 286 61.5
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 4.0e-95 352.4 302 57.9
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 1.5e-94 350.5 339 55.8
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 3.4e-94 349.4 349 53.9
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 7.6e-94 348.2 290 56.6
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 1.3e-93 347.4 295 58.6
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 1.3e-93 347.4 312 53.8
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 4.9e-93 345.5 334 55.4
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 8.4e-93 344.7 323 54.8
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 1.1e-92 344.4 294 57.5
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 1.9e-92 343.6 351 52.7
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 7.1e-92 341.7 330 54.5
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 9.3e-92 341.3 325 54.5
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 9.3e-92 341.3 295 55.9
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 9.3e-92 341.3 322 55.3
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.7e-91 339.7 343 54.8
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 6.0e-91 338.6 342 54.4
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 2.5e-89 333.2 303 55.4
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 2.5e-89 333.2 346 51.7
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 4.3e-89 332.4 292 56.5
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 5.6e-89 332.0 348 51.7
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 2.1e-88 330.1 292 55.8
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 4.8e-88 328.9 297 55.9
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 6.2e-88 328.6 298 53.0
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 8.1e-88 328.2 325 54.5
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 1.1e-87 327.8 381 49.6
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 3.1e-87 326.2 331 51.4
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 6.9e-87 325.1 323 50.2
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 1.5e-86 323.9 345 49.3
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 2.6e-86 323.2 299 55.2
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 3.8e-85 319.3 342 48.8
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 8.4e-85 318.2 337 48.1
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 1.9e-84 317.0 329 53.2
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 1.9e-84 317.0 239 63.2
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 4.2e-84 315.8 302 54.0
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 1.8e-82 310.5 342 49.1
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 6.7e-82 308.5 257 56.4
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 8.7e-82 308.1 312 51.6
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 4.3e-81 305.8 312 51.3
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 7.4e-81 305.1 290 52.8
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 8.2e-80 301.6 250 60.0
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 6.9e-79 298.5 338 47.6
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 2.5e-76 290.0 213 63.4
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 8.7e-74 281.6 275 51.3
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 1.5e-73 280.8 315 46.3
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 1.9e-73 280.4 336 48.5
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 3.3e-73 279.6 340 44.7
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 4.4e-57 226.1 349 37.0
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 3.1e-55 219.9 315 39.4
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 5.3e-55 219.2 330 37.6
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 3.7e-48 196.4 160 61.9
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 2.0e-46 190.7 358 37.7
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 1.0e-45 188.3 161 55.3
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 5.0e-45 186.0 292 35.3
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.8e-40 170.2 170 54.7
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 9.1e-39 165.2 298 31.9
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 1.7e-32 144.4 199 46.2
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 6.3e-32 142.5 126 58.7
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 2.4e-31 140.6 101 62.4
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 3.3e-28 130.2 129 56.6
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.9e-24 116.3 97 60.8
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 5.9e-22 109.4 350 28.0
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 6.6e-21 105.9 132 43.9
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 1.1e-15 88.6 325 28.3


User provided reference genes

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