Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0514711 Helianthus annuus HOM05D001069 ORTHO05D007586 3.2e-63 245.0 128 100.0
ECA233G1896 Erigeron canadensis HOM05D000316 ORTHO05D000374 1.7e-56 222.6 128 89.8
Thecc.05G281200 Theobroma cacao HOM05D001069 ORTHO05D007586 5.7e-52 207.6 128 84.4
Lj5g0026442 Lotus japonicus HOM05D001069 ORTHO05D007586 9.6e-52 206.8 128 82.8
Psat6g145040 Pisum sativum HOM05D001069 ORTHO05D007586 2.1e-51 205.7 126 84.1
Duzib128G0644 Durio zibethinus HOM05D001069 ORTHO05D007586 2.8e-51 205.3 128 82.8
CSS0013670 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 8.2e-51 203.8 126 83.3
CSS0018717 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 8.2e-51 203.8 126 83.3
Prupe.6G344500 Prunus persica HOM05D001069 ORTHO05D007586 8.2e-51 203.8 126 82.5
Lalb_Chr21g0311011 Lupinus albus HOM05D001069 ORTHO05D007586 1.1e-50 203.4 126 83.3
Manes.08G135700 Manihot esculenta HOM05D001069 ORTHO05D007586 1.1e-50 203.4 126 82.5
Oeu002656.1 Olea europaea HOM05D001069 ORTHO05D007586 1.8e-50 202.6 129 82.2
DCAR_006651 Daucus carota HOM05D001069 ORTHO05D007586 2.4e-50 202.2 128 81.2
Gohir.A13G104300 Gossypium hirsutum HOM05D001069 ORTHO05D007586 2.4e-50 202.2 128 82.0
Manes.09G151800 Manihot esculenta HOM05D001069 ORTHO05D007586 2.4e-50 202.2 126 81.7
Duzib177G1121 Durio zibethinus HOM05D001069 ORTHO05D007586 3.1e-50 201.8 128 82.0
Gohir.D13G107700 Gossypium hirsutum HOM05D001069 ORTHO05D007586 3.1e-50 201.8 128 82.0
Lalb_Chr06g0168091 Lupinus albus HOM05D001069 ORTHO05D007586 3.1e-50 201.8 126 81.7
MD12G1242900 Malus domestica HOM05D001069 ORTHO05D007586 3.1e-50 201.8 126 82.5
VMungo0720G0790 Vigna mungo HOM05D001069 ORTHO05D007586 3.1e-50 201.8 126 83.3
MD04G1225700 Malus domestica HOM05D001069 ORTHO05D007586 4.1e-50 201.4 126 82.5
RcHm_v2.0_Chr3g0450701 Rosa chinensis HOM05D001069 ORTHO05D007586 4.1e-50 201.4 126 81.7
Nn1g02583 Nelumbo nucifera HOM05D001069 ORTHO05D007586 6.9e-50 200.7 126 81.0
Nitab4.5_0001592g0010 Nicotiana tabacum HOM05D001069 ORTHO05D007586 6.9e-50 200.7 129 83.7
QL03p027238 Quercus lobata HOM05D001069 ORTHO05D007586 6.9e-50 200.7 125 81.6
FAN09G0270 Fragaria x ananassa HOM05D001069 ORTHO05D007586 1.2e-49 199.9 126 80.2
Glyma.20G225500 Glycine max HOM05D001069 ORTHO05D007586 1.2e-49 199.9 126 82.5
Medtr1g080770 Medicago truncatula HOM05D001069 ORTHO05D007586 1.2e-49 199.9 126 81.7
TPR.G12907 Trifolium pratense HOM05D001069 ORTHO05D007586 1.2e-49 199.9 126 81.7
FvH4_6g02700 Fragaria vesca HOM05D001069 ORTHO05D007586 1.5e-49 199.5 126 81.0
FAN14G5212 Fragaria x ananassa HOM05D001069 ORTHO05D007586 1.5e-49 199.5 126 81.0
Nitab4.5_0008996g0040 Nicotiana tabacum HOM05D001069 ORTHO05D007586 1.5e-49 199.5 129 82.9
Rhsim07G0074100 Rhododendron simsii HOM05D001069 ORTHO05D007586 1.5e-49 199.5 126 81.7
MSTRG.20449 Avicennia marina HOM05D001069 ORTHO05D007586 2.0e-49 199.1 129 80.6
Actinidia32808 Actinidia chinensis HOM05D001069 ORTHO05D007586 2.6e-49 198.7 126 81.7
Cfa006409 Carpinus fangiana HOM05D001069 ORTHO05D001549 2.6e-49 198.7 124 82.3
Haze_04370 Corylus avellana HOM05D001069 ORTHO05D007586 2.6e-49 198.7 124 82.3
FAN14G1639 Fragaria x ananassa HOM05D001069 ORTHO05D007586 2.6e-49 198.7 126 81.0
FAN14G4385 Fragaria x ananassa HOM05D001069 ORTHO05D007586 2.6e-49 198.7 126 81.0
TAR636G2667 Trochodendron aralioides HOM05D001069 ORTHO05D001549 2.6e-49 198.7 124 81.5
arahy.Tifrunner.gnm1.ann1.SY74BB Arachis hypogaea HOM05D001069 ORTHO05D007586 3.4e-49 198.4 126 81.0
CiPaw.08G122900 Carya illinoinensis HOM05D001069 ORTHO05D007586 3.4e-49 198.4 126 79.4
PGR004G2600 Punica granatum HOM05D001069 ORTHO05D007586 3.4e-49 198.4 126 81.7
GSVIVG01036275001 Vitis vinifera HOM05D001069 ORTHO05D007586 3.4e-49 198.4 126 81.0
PSO210G4375 Papaver somniferum HOM05D001069 ORTHO05D007586 4.5e-49 198.0 128 80.5
CANSAT54G2612 Cannabis sativa HOM05D001069 ORTHO05D007586 5.8e-49 197.6 127 79.5
CAN.G134.94 Capsicum annuum HOM05D001069 ORTHO05D007586 5.8e-49 197.6 122 84.4
FAN02G3324 Fragaria x ananassa HOM05D001069 ORTHO05D007586 5.8e-49 197.6 126 80.2
FAN05G3732 Fragaria x ananassa HOM05D001069 ORTHO05D007586 5.8e-49 197.6 126 79.4
Gorai.013G120600 Gossypium raimondii HOM05D001069 ORTHO05D007586 5.8e-49 197.6 123 82.9
Glyma.10G162900 Glycine max HOM05D001069 ORTHO05D007586 7.6e-49 197.2 126 81.0
Peaxi162Scf00282g00417 Petunia axillaris HOM05D001069 ORTHO05D007586 7.6e-49 197.2 129 81.4
SGA_v2.0_scaffold5G02970 Striga asiatica HOM05D001069 ORTHO05D007586 7.6e-49 197.2 129 79.8
CiPaw.07G068400 Carya illinoinensis HOM05D001069 ORTHO05D007586 1.0e-48 196.8 126 81.0
Dinv20292 Davidia involucrata HOM05D001069 ORTHO05D007586 1.0e-48 196.8 126 81.0
Eucgr.H04324 Eucalyptus grandis HOM05D001069 ORTHO05D007586 1.0e-48 196.8 126 80.2
PSO832G3124 Papaver somniferum HOM05D001069 ORTHO05D007586 1.7e-48 196.1 128 79.7
Phvul.007G187900 Phaseolus vulgaris HOM05D001069 ORTHO05D007586 2.2e-48 195.7 126 80.2
arahy.Tifrunner.gnm1.ann1.AYUH3A Arachis hypogaea HOM05D001069 ORTHO05D007586 2.9e-48 195.3 126 80.2
Atru.chr2.835 Acer truncatum HOM05D001069 ORTHO05D007586 5.0e-48 194.5 127 78.0
Ca_10042_v3 Cicer arietinum L. HOM05D001069 ORTHO05D007586 5.0e-48 194.5 124 80.6
Nn3g19512 Nelumbo nucifera HOM05D001069 ORTHO05D007586 5.0e-48 194.5 126 79.4
Migut.B01094 Erythranthe guttata HOM05D001069 ORTHO05D007586 6.5e-48 194.1 129 78.3
Potri.005G054500 Populus trichocarpa HOM05D001069 ORTHO05D007586 8.4e-48 193.7 126 80.2
Potri.013G042100 Populus trichocarpa HOM05D001069 ORTHO05D007586 1.4e-47 193.0 126 78.6
unitig_52.g17389 Utricularia gibba HOM05D001069 ORTHO05D007586 1.4e-47 193.0 122 82.0
Cc02_g30720 Coffea canephora HOM05D001069 ORTHO05D007586 2.5e-47 192.2 129 76.7
Aqoxy2G00949 Aquilegia oxysepala HOM05D001069 ORTHO05D007586 3.2e-47 191.8 128 75.0
COL.COLO4_15368 Corchorus olitorius HOM05D001069 ORTHO05D007586 5.5e-47 191.0 123 79.7
Sabra05G0047400 Salix brachista HOM05D001069 ORTHO05D001549 7.1e-47 190.7 126 79.4
Sc09g0003960 Simmondsia chinensis HOM05D001069 ORTHO05D007586 3.5e-46 188.3 126 76.2
Sed0025346 Sechium edule HOM05D001069 ORTHO05D007586 4.6e-46 188.0 126 74.6
CDE06G2591 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 6.1e-46 187.6 126 76.2
MELO3C004390.2 Cucumis melo HOM05D001069 ORTHO05D007586 7.9e-46 187.2 126 73.0
THA.LOC104805822 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 1.3e-45 186.4 126 76.2
THA.LOC104823751 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 1.3e-45 186.4 126 75.4
Os03g0628900 Oryza sativa ssp. japonica HOM05D001069 ORTHO05D007586 3.9e-45 184.9 126 73.0
ClCG02G016730 Citrullus lanatus HOM05D001069 ORTHO05D007586 8.7e-45 183.7 124 73.4
TWI12G0612 Tripterygium wilfordii HOM05D001069 ORTHO05D007586 8.7e-45 183.7 126 75.4
CARHR008700 Cardamine hirsuta HOM05D001069 ORTHO05D007586 2.5e-44 182.2 126 73.0
Hund22103 Selenicereus undatus HOM05D001069 ORTHO05D007586 9.7e-44 180.3 124 74.2
HanXRQChr17g0559331 Helianthus annuus HOM05D001069 ORTHO05D007586 1.3e-43 179.9 128 78.1
AUR62004967 Chenopodium quinoa HOM05D001069 ORTHO05D007586 2.2e-43 179.1 126 73.8
AUR62000994 Chenopodium quinoa HOM05D001069 ORTHO05D007586 2.8e-43 178.7 126 73.0
BcaB07g34137 Brassica carinata HOM05D001069 ORTHO05D007586 4.8e-43 177.9 130 73.8
Aa31sc20G40 Aethionema arabicum HOM05D001069 ORTHO05D007586 6.3e-43 177.6 128 71.9
Ciclev10029576m.g Citrus clementina HOM05D001069 ORTHO05D007586 8.2e-43 177.2 121 74.4
PGSC0003DMG401019457 Solanum tuberosum HOM05D001069 ORTHO05D007586 1.4e-42 176.4 129 75.2
C05p06850 Brassica napus HOM05D001069 ORTHO05D007586 1.8e-42 176.0 128 71.9
A06p05680 Brassica napus HOM05D001069 ORTHO05D007586 2.4e-42 175.6 130 72.3
EL10Ac4g09163 Beta vulgaris HOM05D001069 ORTHO05D007586 5.3e-42 174.5 126 71.4
CsaV3_2G004010 Cucumis sativus L. HOM05D001069 ORTHO05D007586 5.3e-42 174.5 126 69.8
Thhalv10009095m.g Eutrema salsugineum HOM05D001069 ORTHO05D007586 1.5e-41 172.9 131 71.0
Sp1g07420 Schrenkiella parvula HOM05D001069 ORTHO05D007586 1.5e-41 172.9 131 71.0
Sed0020567 Sechium edule HOM05D001069 ORTHO05D007586 2.0e-41 172.6 126 68.3
AT1G08780 Arabidopsis thaliana HOM05D001069 ORTHO05D007586 2.6e-41 172.2 130 70.0
AL1G19210 Arabidopsis lyrata HOM05D001069 ORTHO05D007586 3.4e-41 171.8 130 69.2
A08p34980 Brassica napus HOM05D001069 ORTHO05D007586 3.4e-41 171.8 127 68.5
BraA08t35409Z Brassica rapa HOM05D001069 ORTHO05D007586 5.9e-41 171.0 127 68.5
Solyc01g097300.4 Solanum lycopersicum HOM05D001069 ORTHO05D007586 5.9e-41 171.0 129 73.6
Sopen01g040970 Solanum pennellii HOM05D001069 ORTHO05D007586 5.9e-41 171.0 129 73.6
ATR0665G433 Amborella trichopoda HOM05D001069 ORTHO05D007586 1.0e-40 170.2 126 69.8
BcaC07g38446 Brassica carinata HOM05D001069 ORTHO05D007586 1.0e-40 170.2 127 67.7
C08p12160 Brassica napus HOM05D001069 ORTHO05D007586 1.0e-40 170.2 127 67.7
BolC5t29444H Brassica oleracea HOM05D001069 ORTHO05D007586 1.0e-40 170.2 118 74.6
CDE07G0518 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 1.0e-40 170.2 126 71.4
BcaNung06267 Brassica carinata HOM05D001069 ORTHO05D007586 1.3e-40 169.9 131 67.2
BraA06t23778Z Brassica rapa HOM05D001069 ORTHO05D007586 2.2e-40 169.1 118 73.7
Carub.0001s0812 Capsella rubella HOM05D001069 ORTHO05D007586 6.5e-40 167.5 118 72.9
HPP92_026288 Vanilla planifolia HOM05D001069 ORTHO05D007586 1.2e-38 163.3 126 68.3
MBI04_g44868_MAGBIO Magnolia biondii HOM05D001069 ORTHO05D007586 3.6e-38 161.8 126 67.5
Zm00001eb051110 Zea mays HOM05D001069 ORTHO05D007586 1.0e-37 160.2 126 65.1
BolC8t48854H Brassica oleracea HOM05D001069 ORTHO05D007586 1.5e-36 156.4 152 56.6
Zm00001eb218870 Zea mays HOM05D001069 ORTHO05D007586 2.5e-36 155.6 126 63.5
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 2.2e-35 152.5 154 58.4
CBR_g8595 Chara braunii HOM05D001069 ORTHO05D007586 2.2e-32 142.5 126 59.5
Pp3c16_6640 Physcomitrium patens HOM05D001069 ORTHO05D007586 2.2e-32 142.5 126 61.1
AagrBONN_evm.TU.Sc2ySwM_369.398 Anthoceros agrestis HOM05D001069 ORTHO05D007586 5.0e-32 141.4 126 59.5
Lsat_1_v5_gn_5_68360 Lactuca sativa HOM05D001069 ORTHO05D007586 1.9e-31 139.4 87 81.6
arahy.Tifrunner.gnm1.ann1.VQ2WN5 Arachis hypogaea HOM05D001069 ORTHO05D007586 1.4e-29 133.3 87 77.0
Mapoly0094s0008 Marchantia polymorpha HOM05D001069 ORTHO05D007586 1.1e-28 130.2 126 55.6
Sabra13G0038700 Salix brachista HOM05D001069 ORTHO05D007586 1.3e-27 126.7 88 75.0
vmacro13808 Vaccinium macrocarpon HOM05D001069 ORTHO05D007586 3.7e-27 125.2 87 75.9
SMO356G0364 Selaginella moellendorffii HOM05D001069 ORTHO05D007586 6.3e-27 124.4 132 53.0
SHI18420 Sapria himalayana HOM05D001069 ORTHO05D007586 2.1e-22 109.4 87 65.5
MCO16G237 Micromonas commoda HOM05D001069 ORTHO05D007586 4.4e-20 101.7 120 45.0
PRCOL_00003582 Prasinoderma coloniale HOM05D001069 ORTHO05D007586 1.0e-16 90.5 121 43.8
Cre16.g671750 Chlamydomonas reinhardtii HOM05D001069 ORTHO05D007586 2.5e-15 85.9 121 42.1
TAR365G0807 Trochodendron aralioides HOM05D001069 ORTHO05D007586 5.2e-13 78.2 61 65.6
arahy.Tifrunner.gnm1.ann1.JAH3YR Arachis hypogaea HOM05D001069 ORTHO05D007586 9.8e-12 73.9 37 94.6
Sabra13G0038600 Salix brachista HOM05D000002 ORTHO05D000001 2.8e-11 72.4 39 89.7
arahy.Tifrunner.gnm1.ann1.X5I3PL Arachis hypogaea HOM05D001069 ORTHO05D007586 3.1e-10 68.9 46 76.1
TAR633G2811 Trochodendron aralioides HOM05D001069 ORTHO05D007586 5.9e-09 64.7 31 96.8
SHI18422 Sapria himalayana HOM05D001069 ORTHO05D007586 8.5e-08 60.8 38 73.7
arahy.Tifrunner.gnm1.ann1.VDJK8S Arachis hypogaea HOM05D001069 ORTHO05D007586 2.7e-06 55.8 49 59.2


User provided reference genes

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