Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 1.2e-256 889.8 570 100.0
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 1.2e-152 544.3 582 67.7
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 7.9e-128 461.8 615 56.6
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 6.8e-103 379.0 736 40.5
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 2.6e-102 377.1 592 42.7
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 4.4e-102 376.3 341 62.2
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 9.8e-102 375.2 350 60.6
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 2.2e-101 374.0 355 58.3
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 2.8e-101 373.6 432 53.0
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 2.4e-100 370.5 384 58.1
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 3.1e-100 370.2 768 41.3
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 4.1e-100 369.8 355 57.7
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 7.0e-100 369.0 447 51.9
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.2e-99 368.2 747 39.9
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 7.8e-99 365.5 400 54.0
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 1.3e-98 364.8 394 54.6
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 3.8e-98 363.2 357 57.4
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 8.6e-98 362.1 693 43.9
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 1.9e-97 360.9 613 41.3
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 5.6e-97 359.4 676 45.1
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 7.3e-97 359.0 362 56.4
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 2.1e-96 357.5 723 42.3
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 2.8e-96 357.1 726 39.8
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 3.6e-96 356.7 451 49.0
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 1.8e-95 354.4 672 41.2
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 3.0e-95 353.6 679 45.1
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 4.4e-94 349.7 671 43.5
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 4.4e-94 349.7 707 41.0
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 7.5e-94 349.0 447 48.3
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 7.5e-94 349.0 444 49.5
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 9.8e-94 348.6 414 50.7
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.3e-93 348.2 699 43.8
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.3e-93 348.2 700 40.7
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 1.7e-93 347.8 748 40.9
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 2.9e-93 347.1 432 48.8
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 2.9e-93 347.1 750 41.3
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 4.9e-93 346.3 450 48.2
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 1.1e-92 345.1 400 50.8
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 1.4e-92 344.7 682 45.6
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 1.8e-92 344.4 385 52.7
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 4.1e-92 343.2 440 48.6
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 1.2e-91 341.7 727 41.0
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 2.0e-91 340.9 699 39.3
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 6.0e-91 339.3 376 54.3
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 1.3e-90 338.2 411 51.1
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 1.7e-90 337.8 399 51.9
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 5.0e-90 336.3 794 38.8
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 6.6e-90 335.9 402 52.5
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 8.6e-90 335.5 392 51.8
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 1.5e-89 334.7 394 50.5
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 1.9e-89 334.3 611 40.8
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 2.5e-89 334.0 398 51.0
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 4.3e-89 333.2 366 51.6
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 4.3e-89 333.2 381 50.9
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 1.6e-88 331.3 468 45.1
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 2.1e-88 330.9 398 50.8
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 1.4e-87 328.2 398 50.3
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 3.1e-87 327.0 431 47.6
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 4.0e-87 326.6 734 39.8
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 8.9e-87 325.5 375 51.7
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.5e-86 324.7 601 41.4
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 3.4e-86 323.6 436 47.5
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 7.5e-86 322.4 412 48.8
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 8.3e-85 318.9 607 41.0
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 2.4e-84 317.4 382 51.6
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 7.0e-84 315.8 444 47.7
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 2.0e-83 314.3 444 47.3
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 5.0e-82 309.7 348 53.2
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 8.6e-82 308.9 752 39.6
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 8.6e-82 308.9 403 47.1
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 1.9e-81 307.8 607 41.8
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 3.3e-81 307.0 710 37.7
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 5.6e-81 306.2 387 48.6
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 2.1e-80 304.3 395 46.8
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 2.1e-80 304.3 623 44.6
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 4.7e-80 303.1 417 47.0
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 8.1e-80 302.4 337 53.1
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 1.8e-79 301.2 360 50.8
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 8.9e-79 298.9 384 48.4
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 1.5e-78 298.1 382 48.7
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 2.0e-78 297.7 374 49.5
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 9.9e-78 295.4 385 47.3
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 1.9e-76 291.2 386 49.7
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 4.1e-76 290.0 378 47.9
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 4.1e-76 290.0 386 49.5
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 5.4e-76 289.7 415 46.0
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 6.0e-75 286.2 381 46.7
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 1.7e-74 284.6 395 45.8
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 7.3e-73 279.3 355 48.7
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 1.2e-72 278.5 335 48.1
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 8.4e-69 265.8 368 46.7
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 1.0e-66 258.8 385 46.5
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 3.0e-66 257.3 369 45.8
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 6.6e-66 256.1 348 47.7
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 4.6e-59 233.4 648 36.9
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 3.0e-50 204.1 362 40.1
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 3.0e-50 204.1 362 40.1
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 4.5e-46 190.3 305 43.6
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 5.1e-42 176.8 358 38.3
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 3.7e-40 170.6 500 38.6
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 1.0e-37 162.5 343 37.9
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 1.6e-35 155.2 335 38.5
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 3.3e-33 147.5 146 54.8
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 1.8e-23 115.2 130 50.8
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 1.2e-22 112.5 243 35.0
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 2.6e-17 94.7 175 39.4
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.1e-12 79.3 125 43.2
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 3.2e-12 77.8 125 42.4
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 9.4e-12 76.3 85 54.1
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 2.7e-11 74.7 139 38.1
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 4.7e-11 73.9 49 67.3
HanXRQChr16g0523381 Helianthus annuus HOM05D001236 ORTHO05D001090 1.8e-10 72.0 45 80.0
Duzib052G0964 Durio zibethinus HOM05D006481 ORTHO05D008160 4.8e-08 63.9 84 46.4
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 9.1e-07 59.7 45 57.8
BcaC05g27423 Brassica carinata HOM05D006481 ORTHO05D008160 1.6e-06 58.9 56 50.0
Hma1.2p1_0883F.1_g232290 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 5.9e-06 57.0 38 78.9
Oeu039499.1 Olea europaea HOM05D006481 ORTHO05D008160 5.9e-06 57.0 44 61.4


User provided reference genes

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