Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0512021 Helianthus annuus HOM05D004208 ORTHO05D005156 1.1e-257 892.9 485 100.0
Lsat_1_v5_gn_7_79121 Lactuca sativa HOM05D004208 ORTHO05D005156 2.3e-199 699.1 490 76.7
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla HOM05D004208 ORTHO05D005156 2.7e-171 605.9 492 67.1
Lj2A1151T32 Lonicera japonica HOM05D004208 ORTHO05D005156 5.6e-169 598.2 499 65.7
Dinv22405 Davidia involucrata HOM05D004208 ORTHO05D005156 5.8e-166 588.2 496 63.1
ECA236G3853 Erigeron canadensis HOM05D004208 ORTHO05D000364 3.8e-165 585.5 468 72.0
CSS0041954 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 8.7e-162 574.3 493 64.1
CSS0038412 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 5.6e-161 571.6 493 64.5
Gohir.A08G190100 Gossypium hirsutum HOM05D004208 ORTHO05D005156 1.1e-159 567.4 493 62.3
Actinidia07297 Actinidia chinensis HOM05D004208 ORTHO05D005156 2.0e-158 563.1 496 61.7
Gohir.D08G208600 Gossypium hirsutum HOM05D004208 ORTHO05D005156 2.6e-158 562.8 494 62.6
Gorai.004G221000 Gossypium raimondii HOM05D004208 ORTHO05D005156 2.6e-158 562.8 494 62.6
GSVIVG01028335001 Vitis vinifera HOM05D004208 ORTHO05D005156 4.5e-158 562.0 496 65.3
Cfa012194 Carpinus fangiana HOM05D004208 ORTHO05D005156 3.8e-157 558.9 481 62.0
Duzib138G0474 Durio zibethinus HOM05D004208 ORTHO05D005156 3.8e-157 558.9 493 61.3
Duzib133G1203 Durio zibethinus HOM05D004208 ORTHO05D005156 1.1e-156 557.4 493 61.5
Thecc.01G258100 Theobroma cacao HOM05D004208 ORTHO05D005156 4.6e-155 552.0 493 60.0
COL.COLO4_05893 Corchorus olitorius HOM05D004208 ORTHO05D005156 2.3e-154 549.7 502 60.8
Actinidia25791 Actinidia chinensis HOM05D004208 ORTHO05D005156 3.3e-153 545.8 507 59.8
TAR636G1466 Trochodendron aralioides HOM05D004208 ORTHO05D005156 4.3e-153 545.4 495 60.4
CiPaw.11G131900 Carya illinoinensis HOM05D004208 ORTHO05D005156 2.2e-152 543.1 464 61.9
PGR031G1029 Punica granatum HOM05D004208 ORTHO05D005156 6.3e-152 541.6 495 59.6
Manes.12G032400 Manihot esculenta HOM05D004208 ORTHO05D005156 2.6e-150 536.2 493 59.4
CANSAT01G2107 Cannabis sativa HOM05D004208 ORTHO05D005156 1.0e-149 534.3 496 58.5
Migut.O00608 Erythranthe guttata HOM05D004208 ORTHO05D005156 1.3e-149 533.9 501 58.5
Haze_08822 Corylus avellana HOM05D004208 ORTHO05D005156 1.1e-148 530.8 494 58.7
QL12p032241 Quercus lobata HOM05D004208 ORTHO05D005156 9.3e-148 527.7 453 65.3
Migut.N01348 Erythranthe guttata HOM05D004208 ORTHO05D005156 1.2e-147 527.3 501 58.1
RcHm_v2.0_Chr6g0288111 Rosa chinensis HOM05D004208 ORTHO05D005156 7.9e-147 524.6 493 61.5
AUR62030125 Chenopodium quinoa HOM05D004208 ORTHO05D005156 3.0e-146 522.7 497 57.9
Sopen01g041810 Solanum pennellii HOM05D004208 ORTHO05D005156 8.7e-146 521.2 502 57.2
Solyc01g098230.3 Solanum lycopersicum HOM05D004208 ORTHO05D005156 1.5e-145 520.4 502 57.0
Sed0002598 Sechium edule HOM05D004208 ORTHO05D005156 1.9e-145 520.0 489 57.7
Atru.chr5.1689 Acer truncatum HOM05D004208 ORTHO05D005156 5.7e-145 518.5 496 61.1
PSO339G3828 Papaver somniferum HOM05D004208 ORTHO05D005156 5.7e-145 518.5 495 58.0
CAN.G134.214 Capsicum annuum HOM05D004208 ORTHO05D005156 9.7e-145 517.7 498 56.0
SalBow1G3185 Salvia bowleyana HOM05D004208 ORTHO05D005156 1.7e-144 516.9 497 57.1
AUR62038602 Chenopodium quinoa HOM05D004208 ORTHO05D005156 2.2e-144 516.5 497 57.1
Prupe.8G223600 Prunus persica HOM05D004208 ORTHO05D005156 2.2e-144 516.5 495 58.0
Sed0003224 Sechium edule HOM05D004208 ORTHO05D005156 3.7e-144 515.8 493 55.8
Peaxi162Scf00225g00519 Petunia axillaris HOM05D004208 ORTHO05D005156 4.8e-144 515.4 514 55.8
CDE03G0182 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 4.1e-143 512.3 497 56.9
Nitab4.5_0000245g0150 Nicotiana tabacum HOM05D004208 ORTHO05D005156 4.1e-143 512.3 490 56.9
FAN17G2653 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.1e-143 511.1 493 58.2
Potri.002G038300 Populus trichocarpa HOM05D004208 ORTHO05D005156 4.5e-142 508.8 494 59.9
Actinidia09547 Actinidia chinensis HOM05D004208 ORTHO05D005156 2.2e-141 506.5 491 56.8
Eucgr.G01944 Eucalyptus grandis HOM05D004208 ORTHO05D005156 8.5e-141 504.6 405 65.4
Manes.13G034400 Manihot esculenta HOM05D004208 ORTHO05D005156 8.5e-141 504.6 493 54.8
FvH4_4g12040 Fragaria vesca HOM05D004208 ORTHO05D005156 1.1e-140 504.2 493 57.6
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.2e-140 502.7 485 57.3
Cc01_g18340 Coffea canephora HOM05D004208 ORTHO05D005156 1.2e-139 500.7 502 55.0
Potri.005G224500 Populus trichocarpa HOM05D004208 ORTHO05D005156 7.9e-139 498.0 495 58.2
Oeu062471.2 Olea europaea HOM05D004208 ORTHO05D005156 3.9e-138 495.7 545 55.0
Dinv34629 Davidia involucrata HOM05D004208 ORTHO05D005156 5.1e-138 495.4 430 64.0
FvH4_2g21470 Fragaria vesca HOM05D004208 ORTHO05D005156 5.1e-138 495.4 493 58.4
CsaV3_5G028820 Cucumis sativus L. HOM05D004208 ORTHO05D005156 6.7e-138 495.0 495 54.7
Sabra05G0173200 Salix brachista HOM05D004208 ORTHO05D005156 6.7e-138 495.0 511 57.5
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 8.8e-138 494.6 493 54.6
Ah.03g147410 Amaranthus hybridus HOM05D004208 ORTHO05D005156 2.0e-137 493.4 497 55.1
Ciclev10019992m.g Citrus clementina HOM05D004208 ORTHO05D005156 2.6e-137 493.0 494 58.3
FAN07G0785 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.6e-137 493.0 524 53.8
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.7e-137 491.1 479 56.8
DCAR_005689 Daucus carota HOM05D004208 ORTHO05D005156 3.7e-136 489.2 513 53.8
Ah.02g120380 Amaranthus hybridus HOM05D004208 ORTHO05D005156 1.4e-135 487.3 496 54.2
TWI32G0756 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 1.8e-135 486.9 493 56.8
EL10Ac7g17258 Beta vulgaris HOM05D004208 ORTHO05D005156 4.1e-135 485.7 448 58.5
FAN15G2877 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.1e-135 485.7 516 54.1
MD05G1197100 Malus domestica HOM05D004208 ORTHO05D005156 4.1e-135 485.7 501 56.5
SGA_v2.0_scaffold32G13335 Striga asiatica HOM05D004208 ORTHO05D005156 1.5e-134 483.8 497 55.9
AT2G36070 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 4.5e-134 482.3 488 53.5
Glyma.04G107400 Glycine max HOM05D004208 ORTHO05D005156 4.5e-134 482.3 494 55.9
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.0e-133 481.1 468 57.5
SGA_v2.0_scaffold58G20323 Striga asiatica HOM05D004208 ORTHO05D005156 2.2e-133 479.9 416 61.3
AL4G32160 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 3.8e-133 479.2 488 53.1
Sabra02G0030700 Salix brachista HOM05D004208 ORTHO05D005156 5.0e-133 478.8 447 60.6
ATR0736G190 Amborella trichopoda HOM05D004208 ORTHO05D005156 2.5e-132 476.5 494 53.8
Rhsim01G0263600 Rhododendron simsii HOM05D004208 ORTHO05D005156 4.2e-132 475.7 500 56.0
MSTRG.16949 Avicennia marina HOM05D004208 ORTHO05D005156 1.6e-131 473.8 491 54.4
Peaxi162Scf00225g00527 Petunia axillaris HOM05D004208 ORTHO05D005156 4.7e-131 472.2 497 53.5
Phvul.005G002100 Phaseolus vulgaris HOM05D004208 ORTHO05D005156 2.0e-129 466.8 495 55.6
Nitab4.5_0001165g0160 Nicotiana tabacum HOM05D004208 ORTHO05D005156 5.7e-129 465.3 454 55.7
Thhalv10001977m.g Eutrema salsugineum HOM05D004208 ORTHO05D005156 2.8e-128 463.0 492 52.0
Nn3g19657 Nelumbo nucifera HOM05D004208 ORTHO05D005156 3.7e-128 462.6 495 55.4
AL3G53520 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 1.4e-127 460.7 494 52.0
TAR362G0204 Trochodendron aralioides HOM05D004208 ORTHO05D005156 1.8e-127 460.3 451 57.9
Carub.0004s1781 Capsella rubella HOM05D004208 ORTHO05D005156 9.1e-127 458.0 493 51.9
Eucgr.B01552 Eucalyptus grandis HOM05D004208 ORTHO05D005156 2.0e-126 456.8 513 53.2
MBI10_g22594_MAGBIO Magnolia biondii HOM05D004208 ORTHO05D005156 1.7e-125 453.8 468 57.1
Psat7g228960 Pisum sativum HOM05D004208 ORTHO05D005156 4.2e-124 449.1 493 51.1
AT2G20510 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 1.0e-122 444.5 493 52.1
BraA09t36939Z Brassica rapa HOM05D004208 ORTHO05D005156 2.3e-122 443.4 487 50.9
Cpa.g.sc81.94 Carica papaya HOM05D004208 ORTHO05D005156 5.2e-122 442.2 449 54.1
VMungo1080G0701 Vigna mungo HOM05D004208 ORTHO05D005156 6.7e-122 441.8 499 53.5
RcHm_v2.0_Chr4g0409381 Rosa chinensis HOM05D004208 ORTHO05D005156 1.5e-121 440.7 431 56.1
BcaB07g31584 Brassica carinata HOM05D004208 ORTHO05D005156 2.0e-121 440.3 478 51.0
A07p00220 Brassica napus HOM05D004208 ORTHO05D005156 2.6e-121 439.9 486 50.6
Sp3g33730 Schrenkiella parvula HOM05D004208 ORTHO05D005156 2.6e-121 439.9 489 51.1
C09p15320 Brassica napus HOM05D004208 ORTHO05D005156 1.3e-120 437.6 487 49.9
BraA07t27815Z Brassica rapa HOM05D004208 ORTHO05D005156 1.3e-120 437.6 486 50.6
arahy.Tifrunner.gnm1.ann1.W57KUE Arachis hypogaea HOM05D004208 ORTHO05D005156 1.7e-120 437.2 528 49.6
A09p12940 Brassica napus HOM05D004208 ORTHO05D005156 3.7e-120 436.0 486 50.0
BolC9t54440H Brassica oleracea HOM05D004208 ORTHO05D005156 1.1e-119 434.5 490 49.4
Aqoxy2G03649 Aquilegia oxysepala HOM05D004208 ORTHO05D005156 3.1e-119 433.0 496 49.8
BcaB03g16846 Brassica carinata HOM05D004208 ORTHO05D005156 3.1e-119 433.0 486 50.2
BolC7t40497H Brassica oleracea HOM05D004208 ORTHO05D005156 3.1e-119 433.0 487 52.2
BcaC04g22784 Brassica carinata HOM05D004208 ORTHO05D005156 2.7e-118 429.9 487 49.3
BcaC06g36740 Brassica carinata HOM05D004208 ORTHO05D005156 4.5e-118 429.1 487 51.5
Ca_26001_v3 Cicer arietinum L. HOM05D004208 ORTHO05D005156 4.5e-118 429.1 500 50.0
Zm00001eb111900 Zea mays HOM05D004208 ORTHO05D005156 7.7e-118 428.3 498 49.4
HPP92_012187 Vanilla planifolia HOM05D004208 ORTHO05D005156 6.5e-117 425.2 451 51.7
THA.LOC104805532 Tarenaya hassleriana HOM05D004208 ORTHO05D005156 1.9e-116 423.7 493 51.5
CARHR130310 Cardamine hirsuta HOM05D004208 ORTHO05D005156 5.5e-116 422.2 488 49.4
Medtr2g083690 Medicago truncatula HOM05D004208 ORTHO05D005156 5.5e-116 422.2 495 48.5
CDE04G1955 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 3.6e-115 419.5 395 57.2
Carub.0003s3496 Capsella rubella HOM05D004208 ORTHO05D005156 6.1e-115 418.7 493 50.5
Lalb_Chr15g0090311 Lupinus albus HOM05D004208 ORTHO05D005156 2.3e-114 416.8 500 52.4
FAN12G3775 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.4e-113 412.9 541 47.1
FAN12G0345 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.4e-113 412.5 541 47.1
CSS0015888 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 1.3e-112 411.0 466 53.0
TWI34G1830 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 1.3e-112 411.0 501 48.3
BcaB08g34912 Brassica carinata HOM05D004208 ORTHO05D005156 4.8e-112 409.1 472 48.3
C07p00510 Brassica napus HOM05D004208 ORTHO05D005156 1.1e-111 407.9 487 49.7
MELO3C033986.2 Cucumis melo HOM05D004208 ORTHO05D005156 1.8e-111 407.1 595 43.2
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea HOM05D004208 ORTHO05D005156 5.0e-109 399.1 489 48.9
TPR.G5025 Trifolium pratense HOM05D004208 ORTHO05D005156 1.5e-105 387.5 403 50.6
Medtr4g075680 Medicago truncatula HOM05D004208 ORTHO05D005156 8.3e-104 381.7 493 45.6
Os07g0409700 Oryza sativa ssp. japonica HOM05D004208 ORTHO05D005156 4.1e-103 379.4 453 49.0
Oeu042777.2 Olea europaea HOM05D004208 ORTHO05D005156 2.0e-102 377.1 499 47.7
Nitab4.5_0001526g0060 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.4e-98 364.4 448 48.7
HanXRQChr10g0294161 Helianthus annuus HOM05D004208 ORTHO05D005156 3.0e-98 363.2 211 94.8
Peaxi162Scf00118g00111 Petunia axillaris HOM05D004208 ORTHO05D005156 2.6e-97 360.1 396 52.5
Lj6g0013651 Lotus japonicus HOM05D004208 ORTHO05D005156 3.4e-97 359.8 496 45.2
Medtr4g029490 Medicago truncatula HOM05D004208 ORTHO05D005156 2.1e-91 340.5 488 43.9
PGSC0003DMG400022489 Solanum tuberosum HOM05D004208 ORTHO05D005156 4.4e-89 332.8 216 71.3
Nitab4.5_0007798g0030 Nicotiana tabacum HOM05D004208 ORTHO05D005156 7.5e-89 332.0 491 44.2
CBR_g30902 Chara braunii HOM05D004208 ORTHO05D005156 9.8e-89 331.6 456 42.8
Oeu021968.1 Olea europaea HOM05D004208 ORTHO05D005156 3.2e-87 326.6 483 44.7
SEGI_36648 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 2.7e-86 323.6 415 46.7
ClCG01G005870 Citrullus lanatus HOM05D004208 ORTHO05D005156 1.3e-85 321.2 216 69.4
Sc05g0000700 Simmondsia chinensis HOM05D004208 ORTHO05D005156 3.1e-82 310.1 352 53.7
SMO353G0191 Selaginella moellendorffii HOM05D004208 ORTHO05D005156 5.2e-82 309.3 446 41.7
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 9.9e-81 305.1 408 45.3
Mapoly0070s0010 Marchantia polymorpha HOM05D004208 ORTHO05D005156 1.4e-79 301.2 366 45.9
unitig_746.g26574 Utricularia gibba HOM05D004208 ORTHO05D005156 2.4e-79 300.4 222 66.2
AagrBONN_evm.TU.Sc2ySwM_344.3623 Anthoceros agrestis HOM05D004208 ORTHO05D005156 3.0e-77 293.5 323 48.0
Pp3c4_19960 Physcomitrium patens HOM05D004208 ORTHO05D005156 6.2e-75 285.8 343 44.6
Pp3c12_7570 Physcomitrium patens HOM05D004208 ORTHO05D005156 1.4e-71 274.6 381 41.5
Lalb_Chr06g0171061 Lupinus albus HOM05D004208 ORTHO05D005156 2.4e-58 230.7 176 63.1
Actinidia37513 Actinidia chinensis HOM05D004208 ORTHO05D005156 3.9e-45 186.8 156 59.0
SEGI_05587 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 3.1e-42 177.2 135 60.0
Lalb_Chr06g0171071 Lupinus albus HOM05D004208 ORTHO05D005156 2.6e-41 174.1 322 43.8
MCO02G332 Micromonas commoda HOM05D004208 ORTHO05D005156 7.6e-41 172.6 361 32.1
Cre16.g660800 Chlamydomonas reinhardtii HOM05D004208 ORTHO05D005156 1.8e-37 161.4 244 33.6
SHI09778 Sapria himalayana HOM05D004208 ORTHO05D005156 9.0e-34 149.1 272 40.1
PRCOL_00004598 Prasinoderma coloniale HOM05D004208 ORTHO05D005156 3.4e-33 147.1 190 37.4
RcHm_v2.0_Chr5g0013581 Rosa chinensis HOM05D004208 ORTHO05D005156 5.1e-29 133.3 95 64.2
CAN.G279.25 Capsicum annuum HOM05D004208 ORTHO05D005156 3.7e-27 127.1 230 40.4
Glyma.09G002800 Glycine max HOM05D004208 ORTHO05D005156 8.2e-19 99.4 77 62.3
SEGI_40921 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 1.1e-18 99.0 65 64.6
Rhsim01G0263500 Rhododendron simsii HOM05D004208 ORTHO05D005156 5.3e-18 96.7 114 49.1
HanXRQChr10g0299451 Helianthus annuus HOM05D004208 ORTHO05D219928 1.2e-14 85.5 48 77.1
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 8.2e-11 72.8 118 43.2
Atru.chr3.4028 Acer truncatum HOM05D004208 ORTHO05D005156 5.9e-09 66.6 56 57.1
MD09G1008600 Malus domestica HOM05D004208 ORTHO05D005156 1.7e-08 65.1 73 47.9
QL04p049599 Quercus lobata HOM05D000196 ORTHO05D000279 1.2e-06 58.9 42 59.5


User provided reference genes

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