Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 3.0e-207 724.9 365 100.0
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 9.2e-156 553.9 364 76.9
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 5.2e-143 511.5 363 71.1
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 8.4e-117 424.5 362 59.7
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 1.2e-115 420.6 361 58.7
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 7.9e-115 417.9 335 60.3
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 3.9e-114 415.6 372 58.3
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 1.9e-113 413.3 361 58.4
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 3.3e-113 412.5 357 58.8
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 1.1e-111 407.5 361 57.6
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 2.6e-110 402.9 353 58.4
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 6.4e-109 398.3 344 60.5
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 6.0e-107 391.7 355 55.8
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 1.3e-106 390.6 365 57.0
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 8.7e-106 387.9 354 56.8
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 1.9e-105 386.7 354 56.5
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.5e-105 386.3 343 56.6
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 3.3e-105 386.0 362 53.9
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.3e-104 384.0 360 53.9
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 1.3e-104 384.0 360 54.2
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 1.4e-103 380.6 359 57.7
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 9.0e-103 377.9 344 57.3
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 2.6e-102 376.3 363 54.3
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 2.6e-102 376.3 360 54.7
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.0e-101 374.4 360 52.8
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 1.0e-101 374.4 358 52.5
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 1.3e-101 374.0 358 55.3
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 2.2e-101 373.2 360 53.9
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 6.5e-101 371.7 369 54.7
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 8.4e-101 371.3 367 52.9
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 8.4e-101 371.3 361 53.2
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 8.4e-101 371.3 355 55.8
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 8.4e-101 371.3 363 53.7
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 1.4e-100 370.5 361 54.0
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 4.2e-100 369.0 354 53.7
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 1.2e-99 367.5 357 52.7
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 1.2e-99 367.5 357 52.9
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 2.7e-99 366.3 360 54.4
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 4.6e-99 365.5 367 52.6
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 7.9e-99 364.8 341 54.5
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 1.3e-98 364.0 359 54.9
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 2.3e-98 363.2 344 53.8
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 2.3e-98 363.2 354 53.4
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 3.0e-98 362.8 361 54.0
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 5.1e-98 362.1 360 50.6
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 1.1e-97 360.9 363 51.5
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.5e-97 360.5 360 52.8
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 6.2e-96 355.1 361 50.1
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 1.8e-95 353.6 359 49.3
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 1.8e-95 353.6 334 54.8
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 6.9e-95 351.7 331 54.1
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 1.9e-92 343.6 296 58.4
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 1.9e-92 343.6 356 50.8
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 3.2e-92 342.8 361 51.2
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 9.3e-92 341.3 358 50.8
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 2.7e-91 339.7 363 50.1
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 6.1e-91 338.6 362 48.1
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 1.3e-90 337.4 333 53.8
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 6.7e-90 335.1 364 50.5
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 2.5e-89 333.2 364 47.8
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.5e-89 333.2 317 53.3
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 4.3e-89 332.4 319 55.2
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 1.3e-88 330.9 366 53.8
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 2.8e-88 329.7 368 51.1
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 1.4e-87 327.4 371 51.8
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.4e-87 326.6 260 60.8
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 4.1e-87 325.9 273 59.7
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 1.5e-86 323.9 300 57.0
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 2.2e-85 320.1 352 48.6
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 6.5e-85 318.5 365 51.5
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 8.5e-85 318.2 384 50.0
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 1.1e-84 317.8 355 52.4
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 3.2e-84 316.2 288 54.2
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 9.4e-84 314.7 256 61.3
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 1.6e-83 313.9 350 52.9
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 1.4e-82 310.8 347 52.4
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 2.3e-82 310.1 359 51.3
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 3.0e-82 309.7 352 51.4
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 3.9e-82 309.3 362 51.4
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 5.1e-82 308.9 371 50.7
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 4.3e-81 305.8 357 51.0
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 9.1e-79 298.1 348 47.1
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 5.7e-73 278.9 267 56.9
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 7.4e-73 278.5 361 45.4
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 9.7e-73 278.1 276 55.4
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 3.1e-71 273.1 370 44.9
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 4.1e-71 272.7 334 47.3
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 5.3e-71 272.3 274 51.5
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 1.9e-68 263.8 279 52.3
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 3.3e-65 253.1 297 47.8
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 9.7e-65 251.5 270 53.0
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 1.6e-62 244.2 299 48.2
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 4.5e-62 242.7 222 56.3
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 2.8e-56 223.4 332 39.2
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 1.9e-52 210.7 274 50.0
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 2.5e-52 210.3 175 62.9
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.0e-50 204.9 185 57.3
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 1.7e-48 197.6 357 35.9
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 1.7e-48 197.6 223 47.5
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.4e-47 194.5 268 45.1
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 4.1e-47 193.0 363 35.8
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 4.3e-44 183.0 355 34.1
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 1.5e-41 174.5 351 34.5
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.2e-40 170.6 345 33.6
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 4.1e-31 139.8 223 40.8
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 3.5e-30 136.7 159 46.5
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 6.6e-29 132.5 85 71.8
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 2.5e-28 130.6 222 38.3
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 7.3e-28 129.0 218 37.6
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 2.8e-27 127.1 94 63.8
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 2.3e-26 124.0 82 64.6
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 3.1e-26 123.6 435 27.1
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 7.5e-25 119.0 197 38.1
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 3.9e-21 106.7 99 55.6
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 1.2e-17 95.1 90 52.2
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 1.9e-15 87.8 319 28.5
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.4e-15 87.4 239 32.6
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 7.8e-14 82.4 66 53.0
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 5.1e-13 79.7 47 76.6
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-12 78.2 74 55.4
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 3.3e-12 77.0 229 27.5
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 1.1e-10 72.0 172 30.8
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 8.9e-10 68.9 42 76.2
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 3.4e-09 67.0 232 27.2


User provided reference genes

Program Settings